RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MUC12Q9UKN1 5478 aa11.26□□□□□ -0.61
HLA-F-227ENST00000485513 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
HLA-F-227ENST00000485513 NDUFC1O43677 76 aa11.13□□□□□ -0.63
HLA-F-227ENST00000485513 KRTAP5-9P26371 169 aa11.13□□□□□ -0.63
HLA-F-227ENST00000485513 ACYP1P07311 99 aa11.12□□□□□ -0.63
HLA-F-227ENST00000485513 UQCRQO14949 82 aa11.11□□□□□ -0.63
HLA-F-227ENST00000485513 H0Y9P7 68 aa11.1□□□□□ -0.63
HLA-F-227ENST00000485513 H0YAA0 97 aa11.1□□□□□ -0.63
HLA-F-227ENST00000485513 ATOX1O00244 68 aa11.09□□□□□ -0.63
HLA-F-227ENST00000485513 ATP5EP2Q5VTU8 51 aa11.09□□□□□ -0.63
HLA-F-227ENST00000485513 HIST1H4AP62805 103 aaKnown RBP11.08□□□□□ -0.64
HLA-F-227ENST00000485513 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
HLA-F-227ENST00000485513 KRTAP20-1Q3LI63 56 aa11.04□□□□□ -0.64
HLA-F-227ENST00000485513 FAM240AA0A1B0GVK7 77 aa11.03□□□□□ -0.64
HLA-F-227ENST00000485513 KMT2DO14686 5537 aa11.01□□□□□ -0.65
HLA-F-227ENST00000485513 A8MUN3 132 aa10.99□□□□□ -0.65
HLA-F-227ENST00000485513 ADM2Q7Z4H4 148 aa10.98□□□□□ -0.65
HLA-F-227ENST00000485513 MDN1Q9NU22 5596 aa10.94□□□□□ -0.66
HLA-F-227ENST00000485513 LINC00208Q96KT6 92 aa10.9□□□□□ -0.66
HLA-F-227ENST00000485513 PRO2289Q9P1D8 64 aa10.87□□□□□ -0.67
HLA-F-227ENST00000485513 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
HLA-F-227ENST00000485513 MT1XP80297 61 aa10.8□□□□□ -0.68
HLA-F-227ENST00000485513 MP68P56378 58 aa10.79□□□□□ -0.68
HLA-F-227ENST00000485513 PLAC4Q8WY50 150 aa10.79□□□□□ -0.68
HLA-F-227ENST00000485513 OCR1Q9BZK8 76 aa10.76□□□□□ -0.69
HLA-F-227ENST00000485513 SPRR2FQ96RM1 72 aa10.75□□□□□ -0.69
HLA-F-227ENST00000485513 R4GN34 69 aa10.73□□□□□ -0.69
HLA-F-227ENST00000485513 P0C880 135 aa10.69□□□□□ -0.7
HLA-F-227ENST00000485513 KRTAP2-3P0C7H8 128 aa10.68□□□□□ -0.7
HLA-F-227ENST00000485513 C20orf197Q8N268 126 aa10.68□□□□□ -0.7
HLA-F-227ENST00000485513 KRTAP2-4Q9BYR9 128 aa10.68□□□□□ -0.7
HLA-F-227ENST00000485513 SPRR2EP22531 72 aa10.66□□□□□ -0.7
HLA-F-227ENST00000485513 SPRR2BP35325 72 aa10.66□□□□□ -0.7
HLA-F-227ENST00000485513 SPRR2AP35326 72 aa10.66□□□□□ -0.7
HLA-F-227ENST00000485513 M0QZ58 72 aa10.63□□□□□ -0.71
HLA-F-227ENST00000485513 KRTAP8-1Q8IUC2 63 aa10.63□□□□□ -0.71
HLA-F-227ENST00000485513 KRTAP12-2P59991 146 aa10.6□□□□□ -0.71
HLA-F-227ENST00000485513 H3BPC8 53 aa10.59□□□□□ -0.71
HLA-F-227ENST00000485513 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
HLA-F-227ENST00000485513 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
HLA-F-227ENST00000485513 LINC01554Q52M75 96 aa10.5□□□□□ -0.73
HLA-F-227ENST00000485513 LCE1AQ5T7P2 110 aa10.48□□□□□ -0.73
HLA-F-227ENST00000485513 SCGB1A1P11684 91 aa10.44□□□□□ -0.74
HLA-F-227ENST00000485513 KRTAP4-8A0A0G2JLE6 195 aa10.42□□□□□ -0.74
HLA-F-227ENST00000485513 KRTAP4-8Q9BYQ9 185 aa10.42□□□□□ -0.74
HLA-F-227ENST00000485513 A0A1B0GV90 55 aa10.41□□□□□ -0.74
HLA-F-227ENST00000485513 TRAV7A0A075B6U4 112 aa10.36□□□□□ -0.75
HLA-F-227ENST00000485513 J3QR89 54 aa10.35□□□□□ -0.75
HLA-F-227ENST00000485513 KRTAP2-2Q9BYT5 123 aa10.33□□□□□ -0.76
HLA-F-227ENST00000485513 KRTAP2-1Q9BYU5 128 aa10.33□□□□□ -0.76
HLA-F-227ENST00000485513 SPRR2DP22532 72 aa10.31□□□□□ -0.76
HLA-F-227ENST00000485513 KRTAP10-7P60409 375 aaPredicted RBP10.31□□□□□ -0.76
HLA-F-227ENST00000485513 ACYP2P14621 99 aa10.29□□□□□ -0.76
HLA-F-227ENST00000485513 KRTAP10-12P60413 245 aa10.25□□□□□ -0.77
HLA-F-227ENST00000485513 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
HLA-F-227ENST00000485513 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
HLA-F-227ENST00000485513 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
HLA-F-227ENST00000485513 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
HLA-F-227ENST00000485513 LCE3BQ5TA77 95 aa10.05□□□□□ -0.8
HLA-F-227ENST00000485513 SNURFQ9Y675 71 aa9.92□□□□□ -0.82
HLA-F-227ENST00000485513 KRTAP13-4Q3LI77 160 aa9.87□□□□□ -0.83
HLA-F-227ENST00000485513 CAMK2N1Q7Z7J9 78 aa9.83□□□□□ -0.84
HLA-F-227ENST00000485513 SPANXA2-OT1Q8N9U9 137 aa9.83□□□□□ -0.84
HLA-F-227ENST00000485513 K7ERU9 68 aa9.81□□□□□ -0.84
HLA-F-227ENST00000485513 KRTAP19-7Q3SYF9 63 aa9.66□□□□□ -0.86
HLA-F-227ENST00000485513 LCE5AQ5TCM9 118 aa9.63□□□□□ -0.87
HLA-F-227ENST00000485513 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
HLA-F-227ENST00000485513 MT1EP04732 61 aa9.59□□□□□ -0.87
HLA-F-227ENST00000485513 COA5Q86WW8 74 aa9.58□□□□□ -0.88
HLA-F-227ENST00000485513 KRTAP19-3Q7Z4W3 81 aa9.57□□□□□ -0.88
HLA-F-227ENST00000485513 DSTQ03001 7570 aaKnown RBP9.56□□□□□ -0.88
HLA-F-227ENST00000485513 A0A0D9SG42 100 aa9.56□□□□□ -0.88
HLA-F-227ENST00000485513 SEC61GP60059 68 aa9.54□□□□□ -0.88
HLA-F-227ENST00000485513 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
HLA-F-227ENST00000485513 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
HLA-F-227ENST00000485513 GPR98Q8WXG9 6306 aa9.46□□□□□ -0.9
HLA-F-227ENST00000485513 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
HLA-F-227ENST00000485513 KRTAP4-9Q9BYQ8 210 aa9.41□□□□□ -0.9
HLA-F-227ENST00000485513 A0A1B0GU33 70 aa9.39□□□□□ -0.91
HLA-F-227ENST00000485513 CYSTM1Q9H1C7 97 aa9.36□□□□□ -0.91
HLA-F-227ENST00000485513 KRTAP19-5Q3LI72 72 aa9.35□□□□□ -0.91
HLA-F-227ENST00000485513 KRTAP12-1P59990 96 aa9.34□□□□□ -0.91
HLA-F-227ENST00000485513 MT1GP13640 62 aa9.31□□□□□ -0.92
HLA-F-227ENST00000485513 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
HLA-F-227ENST00000485513 COX7CP15954 63 aa9.24□□□□□ -0.93
HLA-F-227ENST00000485513 H7BZZ5 65 aa9.18□□□□□ -0.94
HLA-F-227ENST00000485513 LCE1DQ5T752 114 aa9.17□□□□□ -0.94
HLA-F-227ENST00000485513 MT1MQ8N339 61 aa9.15□□□□□ -0.94
HLA-F-227ENST00000485513 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
HLA-F-227ENST00000485513 MT1LQ93083 61 aa9.13□□□□□ -0.95
HLA-F-227ENST00000485513 A0A1B0GU69 56 aa9.1□□□□□ -0.95
HLA-F-227ENST00000485513 LCE4AQ5TA78 99 aa9.09□□□□□ -0.95
HLA-F-227ENST00000485513 A8MU10 97 aa9.06□□□□□ -0.96
HLA-F-227ENST00000485513 MT4P47944 62 aa9.03□□□□□ -0.96
HLA-F-227ENST00000485513 LCE3AQ5TA76 89 aa9.02□□□□□ -0.97
HLA-F-227ENST00000485513 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
HLA-F-227ENST00000485513 HMCN1Q96RW7 5635 aa9□□□□□ -0.97
HLA-F-227ENST00000485513 TNP1P09430 55 aa8.98□□□□□ -0.97
HLA-F-227ENST00000485513 KRTAP4-3Q9BYR4 195 aa8.95□□□□□ -0.98
HLA-F-227ENST00000485513 KRTAP5-4Q6L8H1 288 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms