RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 HERC1Q15751 4861 aa8.48□□□□□ -1.05
CTSA-207ENST00000484855 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
CTSA-207ENST00000484855 A0A1B0GU69 56 aa8.44□□□□□ -1.06
CTSA-207ENST00000484855 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
CTSA-207ENST00000484855 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
CTSA-207ENST00000484855 S4R3F8 94 aa8.4□□□□□ -1.06
CTSA-207ENST00000484855 LCA10Q71F78 164 aa8.39□□□□□ -1.07
CTSA-207ENST00000484855 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
CTSA-207ENST00000484855 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
CTSA-207ENST00000484855 A6NED7 52 aa8.35□□□□□ -1.07
CTSA-207ENST00000484855 SEC61GP60059 68 aa8.34□□□□□ -1.07
CTSA-207ENST00000484855 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
CTSA-207ENST00000484855 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
CTSA-207ENST00000484855 A8MU10 97 aa8.21□□□□□ -1.1
CTSA-207ENST00000484855 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
CTSA-207ENST00000484855 UQCR11O14957 56 aa8.2□□□□□ -1.1
CTSA-207ENST00000484855 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
CTSA-207ENST00000484855 MUC2Q02817 5179 aa8.16□□□□□ -1.1
CTSA-207ENST00000484855 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.11
CTSA-207ENST00000484855 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
CTSA-207ENST00000484855 A0A1B0GU33 70 aa8.12□□□□□ -1.11
CTSA-207ENST00000484855 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CTSA-207ENST00000484855 KRTAP10-6P60371 365 aaPredicted RBP8.09□□□□□ -1.11
CTSA-207ENST00000484855 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
CTSA-207ENST00000484855 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
CTSA-207ENST00000484855 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
CTSA-207ENST00000484855 H0YAA0 97 aa8.03□□□□□ -1.12
CTSA-207ENST00000484855 P0C880 135 aa8.02□□□□□ -1.13
CTSA-207ENST00000484855 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
CTSA-207ENST00000484855 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
CTSA-207ENST00000484855 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
CTSA-207ENST00000484855 PMAIP1Q13794 54 aa7.91□□□□□ -1.14
CTSA-207ENST00000484855 LCE2CQ5TA81 110 aa7.9□□□□□ -1.15
CTSA-207ENST00000484855 A6NN06 94 aa7.84□□□□□ -1.15
CTSA-207ENST00000484855 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
CTSA-207ENST00000484855 A0A0D9SG42 100 aa7.8□□□□□ -1.16
CTSA-207ENST00000484855 M0QZ58 72 aa7.8□□□□□ -1.16
CTSA-207ENST00000484855 R4GN34 69 aa7.75□□□□□ -1.17
CTSA-207ENST00000484855 MT1HP80294 61 aa7.74□□□□□ -1.17
CTSA-207ENST00000484855 K7ERS5 55 aa7.73□□□□□ -1.17
CTSA-207ENST00000484855 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
CTSA-207ENST00000484855 M0R2T5 61 aa7.72□□□□□ -1.17
CTSA-207ENST00000484855 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
CTSA-207ENST00000484855 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
CTSA-207ENST00000484855 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
CTSA-207ENST00000484855 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
CTSA-207ENST00000484855 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
CTSA-207ENST00000484855 CRIPTQ9P021 101 aa7.59□□□□□ -1.2
CTSA-207ENST00000484855 H3BS24 57 aa7.52□□□□□ -1.21
CTSA-207ENST00000484855 MT2AP02795 61 aa7.48□□□□□ -1.21
CTSA-207ENST00000484855 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
CTSA-207ENST00000484855 MT1FP04733 61 aa7.45□□□□□ -1.22
CTSA-207ENST00000484855 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
CTSA-207ENST00000484855 ROMO1P60602 79 aa7.43□□□□□ -1.22
CTSA-207ENST00000484855 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
CTSA-207ENST00000484855 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
CTSA-207ENST00000484855 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
CTSA-207ENST00000484855 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
CTSA-207ENST00000484855 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
CTSA-207ENST00000484855 A0A0A0MQY5 61 aa7.26□□□□□ -1.25
CTSA-207ENST00000484855 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
CTSA-207ENST00000484855 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
CTSA-207ENST00000484855 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
CTSA-207ENST00000484855 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
CTSA-207ENST00000484855 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
CTSA-207ENST00000484855 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
CTSA-207ENST00000484855 MT1BP07438 61 aa7.08□□□□□ -1.28
CTSA-207ENST00000484855 LCE2BO14633 110 aa6.98□□□□□ -1.29
CTSA-207ENST00000484855 TNP1P09430 55 aa6.94□□□□□ -1.3
CTSA-207ENST00000484855 MT1XP80297 61 aa6.89□□□□□ -1.31
CTSA-207ENST00000484855 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
CTSA-207ENST00000484855 USH2AO75445 5202 aa6.81□□□□□ -1.32
CTSA-207ENST00000484855 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
CTSA-207ENST00000484855 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
CTSA-207ENST00000484855 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
CTSA-207ENST00000484855 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
CTSA-207ENST00000484855 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
CTSA-207ENST00000484855 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
CTSA-207ENST00000484855 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
CTSA-207ENST00000484855 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
CTSA-207ENST00000484855 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
CTSA-207ENST00000484855 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
CTSA-207ENST00000484855 KMT2DO14686 5537 aa6.39□□□□□ -1.39
CTSA-207ENST00000484855 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
CTSA-207ENST00000484855 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
CTSA-207ENST00000484855 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
CTSA-207ENST00000484855 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
CTSA-207ENST00000484855 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CTSA-207ENST00000484855 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
CTSA-207ENST00000484855 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
CTSA-207ENST00000484855 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
CTSA-207ENST00000484855 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
CTSA-207ENST00000484855 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
CTSA-207ENST00000484855 MT1EP04732 61 aa6.03□□□□□ -1.44
CTSA-207ENST00000484855 LUZP6Q538Z0 58 aa6□□□□□ -1.45
CTSA-207ENST00000484855 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
CTSA-207ENST00000484855 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
CTSA-207ENST00000484855 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
CTSA-207ENST00000484855 MT1LQ93083 61 aa5.93□□□□□ -1.46
CTSA-207ENST00000484855 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms