RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
CPNE1-224ENST00000483359 BRK1Q8WUW1 75 aa8.79□□□□□ -1
CPNE1-224ENST00000483359 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
CPNE1-224ENST00000483359 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
CPNE1-224ENST00000483359 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-224ENST00000483359 H3BPC8 53 aa8.72□□□□□ -1.01
CPNE1-224ENST00000483359 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-224ENST00000483359 SNURFQ9Y675 71 aa8.68□□□□□ -1.02
CPNE1-224ENST00000483359 PMAIP1Q13794 54 aa8.64□□□□□ -1.03
CPNE1-224ENST00000483359 S4R3F8 94 aa8.61□□□□□ -1.03
CPNE1-224ENST00000483359 LCA10Q71F78 164 aa8.57□□□□□ -1.04
CPNE1-224ENST00000483359 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
CPNE1-224ENST00000483359 A8MUN3 132 aa8.52□□□□□ -1.05
CPNE1-224ENST00000483359 Q1T7F1 81 aa8.52□□□□□ -1.05
CPNE1-224ENST00000483359 MT2AP02795 61 aa8.5□□□□□ -1.05
CPNE1-224ENST00000483359 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
CPNE1-224ENST00000483359 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.05
CPNE1-224ENST00000483359 MT1FP04733 61 aa8.45□□□□□ -1.06
CPNE1-224ENST00000483359 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
CPNE1-224ENST00000483359 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
CPNE1-224ENST00000483359 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
CPNE1-224ENST00000483359 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-224ENST00000483359 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
CPNE1-224ENST00000483359 ACYP2P14621 99 aa8.33□□□□□ -1.08
CPNE1-224ENST00000483359 KTN1-AS1Q86SY8 53 aa8.31□□□□□ -1.08
CPNE1-224ENST00000483359 PSPHP1O15172 72 aa8.3□□□□□ -1.08
CPNE1-224ENST00000483359 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
CPNE1-224ENST00000483359 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
CPNE1-224ENST00000483359 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
CPNE1-224ENST00000483359 Q5VV11 94 aa8.21□□□□□ -1.09
CPNE1-224ENST00000483359 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
CPNE1-224ENST00000483359 USH2AO75445 5202 aa8.15□□□□□ -1.1
CPNE1-224ENST00000483359 H0YAA0 97 aa8.15□□□□□ -1.1
CPNE1-224ENST00000483359 LCE2BO14633 110 aa8.15□□□□□ -1.1
CPNE1-224ENST00000483359 COA5Q86WW8 74 aa8.14□□□□□ -1.11
CPNE1-224ENST00000483359 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
CPNE1-224ENST00000483359 A6NN06 94 aa8.1□□□□□ -1.11
CPNE1-224ENST00000483359 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
CPNE1-224ENST00000483359 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
CPNE1-224ENST00000483359 A6NED7 52 aa8.06□□□□□ -1.12
CPNE1-224ENST00000483359 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
CPNE1-224ENST00000483359 A8MU10 97 aa8.06□□□□□ -1.12
CPNE1-224ENST00000483359 P0C880 135 aa8.04□□□□□ -1.12
CPNE1-224ENST00000483359 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CPNE1-224ENST00000483359 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
CPNE1-224ENST00000483359 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
CPNE1-224ENST00000483359 CRIPTQ9P021 101 aa8□□□□□ -1.13
CPNE1-224ENST00000483359 SSPOA2VEC9 5147 aa8□□□□□ -1.13
CPNE1-224ENST00000483359 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
CPNE1-224ENST00000483359 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
CPNE1-224ENST00000483359 R4GN34 69 aa7.91□□□□□ -1.14
CPNE1-224ENST00000483359 M0QZ58 72 aa7.89□□□□□ -1.15
CPNE1-224ENST00000483359 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
CPNE1-224ENST00000483359 MT1BP07438 61 aa7.85□□□□□ -1.15
CPNE1-224ENST00000483359 LINC01554Q52M75 96 aa7.79□□□□□ -1.16
CPNE1-224ENST00000483359 H3BS24 57 aa7.77□□□□□ -1.17
CPNE1-224ENST00000483359 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
CPNE1-224ENST00000483359 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
CPNE1-224ENST00000483359 A0A1B0GU69 56 aa7.71□□□□□ -1.17
CPNE1-224ENST00000483359 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
CPNE1-224ENST00000483359 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
CPNE1-224ENST00000483359 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
CPNE1-224ENST00000483359 A0A1B0GU33 70 aa7.64□□□□□ -1.19
CPNE1-224ENST00000483359 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
CPNE1-224ENST00000483359 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
CPNE1-224ENST00000483359 A0A0D9SG42 100 aa7.55□□□□□ -1.2
CPNE1-224ENST00000483359 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
CPNE1-224ENST00000483359 UQCR11O14957 56 aa7.48□□□□□ -1.21
CPNE1-224ENST00000483359 MT1XP80297 61 aa7.48□□□□□ -1.21
CPNE1-224ENST00000483359 MIR22HGQ0VDD5 57 aa7.48□□□□□ -1.21
CPNE1-224ENST00000483359 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
CPNE1-224ENST00000483359 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
CPNE1-224ENST00000483359 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
CPNE1-224ENST00000483359 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
CPNE1-224ENST00000483359 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
CPNE1-224ENST00000483359 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
CPNE1-224ENST00000483359 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
CPNE1-224ENST00000483359 ROMO1P60602 79 aa7.25□□□□□ -1.25
CPNE1-224ENST00000483359 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
CPNE1-224ENST00000483359 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
CPNE1-224ENST00000483359 KMT2DO14686 5537 aa7.21□□□□□ -1.25
CPNE1-224ENST00000483359 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
CPNE1-224ENST00000483359 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
CPNE1-224ENST00000483359 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
CPNE1-224ENST00000483359 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
CPNE1-224ENST00000483359 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
CPNE1-224ENST00000483359 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
CPNE1-224ENST00000483359 K7ERS5 55 aa6.99□□□□□ -1.29
CPNE1-224ENST00000483359 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
CPNE1-224ENST00000483359 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
CPNE1-224ENST00000483359 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
CPNE1-224ENST00000483359 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
CPNE1-224ENST00000483359 TNP1P09430 55 aa6.86□□□□□ -1.31
CPNE1-224ENST00000483359 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
CPNE1-224ENST00000483359 NEBP20929 6669 aa6.76□□□□□ -1.33
CPNE1-224ENST00000483359 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
CPNE1-224ENST00000483359 NDUFAF8A1L188 74 aa6.71□□□□□ -1.33
CPNE1-224ENST00000483359 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
CPNE1-224ENST00000483359 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
CPNE1-224ENST00000483359 SPRR2EP22531 72 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms