RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 USH2AO75445 5202 aa6.69□□□□□ -1.34
VARS-225ENST00000482996 SNURFQ9Y675 71 aa6.69□□□□□ -1.34
VARS-225ENST00000482996 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
VARS-225ENST00000482996 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
VARS-225ENST00000482996 NDUFC1O43677 76 aa6.66□□□□□ -1.34
VARS-225ENST00000482996 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
VARS-225ENST00000482996 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
VARS-225ENST00000482996 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
VARS-225ENST00000482996 LCE2BO14633 110 aa6.62□□□□□ -1.35
VARS-225ENST00000482996 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
VARS-225ENST00000482996 H7BZZ5 65 aa6.52□□□□□ -1.37
VARS-225ENST00000482996 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
VARS-225ENST00000482996 TMEM258P61165 79 aa6.51□□□□□ -1.37
VARS-225ENST00000482996 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
VARS-225ENST00000482996 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
VARS-225ENST00000482996 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
VARS-225ENST00000482996 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
VARS-225ENST00000482996 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
VARS-225ENST00000482996 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
VARS-225ENST00000482996 S4R3F8 94 aa6.49□□□□□ -1.37
VARS-225ENST00000482996 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
VARS-225ENST00000482996 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
VARS-225ENST00000482996 A8MUN3 132 aa6.44□□□□□ -1.38
VARS-225ENST00000482996 LCA10Q71F78 164 aa6.42□□□□□ -1.38
VARS-225ENST00000482996 ACYP2P14621 99 aa6.41□□□□□ -1.38
VARS-225ENST00000482996 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
VARS-225ENST00000482996 DMAC1Q96GE9 116 aa6.4□□□□□ -1.38
VARS-225ENST00000482996 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
VARS-225ENST00000482996 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
VARS-225ENST00000482996 COA5Q86WW8 74 aa6.3□□□□□ -1.4
VARS-225ENST00000482996 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
VARS-225ENST00000482996 SPTSSBQ8NFR3 76 aa6.29□□□□□ -1.4
VARS-225ENST00000482996 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
VARS-225ENST00000482996 Q5VV11 94 aa6.24□□□□□ -1.41
VARS-225ENST00000482996 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
VARS-225ENST00000482996 CRIPTQ9P021 101 aa6.21□□□□□ -1.42
VARS-225ENST00000482996 MT1BP07438 61 aa6.2□□□□□ -1.42
VARS-225ENST00000482996 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
VARS-225ENST00000482996 A6NN06 94 aa6.16□□□□□ -1.42
VARS-225ENST00000482996 H0YAA0 97 aa6.16□□□□□ -1.42
VARS-225ENST00000482996 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
VARS-225ENST00000482996 NEBP20929 6669 aa6.11□□□□□ -1.43
VARS-225ENST00000482996 SEC61GP60059 68 aa6.1□□□□□ -1.43
VARS-225ENST00000482996 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
VARS-225ENST00000482996 V9GYY9 64 aa6.1□□□□□ -1.43
VARS-225ENST00000482996 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
VARS-225ENST00000482996 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
VARS-225ENST00000482996 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
VARS-225ENST00000482996 A0A1B0GU69 56 aa6.03□□□□□ -1.44
VARS-225ENST00000482996 Q1T7F1 81 aa5.99□□□□□ -1.45
VARS-225ENST00000482996 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
VARS-225ENST00000482996 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
VARS-225ENST00000482996 R4GN34 69 aa5.96□□□□□ -1.46
VARS-225ENST00000482996 P0C880 135 aa5.95□□□□□ -1.46
VARS-225ENST00000482996 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
VARS-225ENST00000482996 PSPHP1O15172 72 aa5.92□□□□□ -1.46
VARS-225ENST00000482996 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
VARS-225ENST00000482996 M0QZ58 72 aa5.91□□□□□ -1.46
VARS-225ENST00000482996 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
VARS-225ENST00000482996 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
VARS-225ENST00000482996 A0A1B0GU33 70 aa5.84□□□□□ -1.47
VARS-225ENST00000482996 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
VARS-225ENST00000482996 MT1XP80297 61 aa5.82□□□□□ -1.48
VARS-225ENST00000482996 A6NED7 52 aa5.81□□□□□ -1.48
VARS-225ENST00000482996 UQCR11O14957 56 aa5.81□□□□□ -1.48
VARS-225ENST00000482996 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
VARS-225ENST00000482996 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
VARS-225ENST00000482996 KMT2DO14686 5537 aa5.74□□□□□ -1.49
VARS-225ENST00000482996 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
VARS-225ENST00000482996 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
VARS-225ENST00000482996 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
VARS-225ENST00000482996 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
VARS-225ENST00000482996 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
VARS-225ENST00000482996 A0A0D9SG42 100 aa5.65□□□□□ -1.5
VARS-225ENST00000482996 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
VARS-225ENST00000482996 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
VARS-225ENST00000482996 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
VARS-225ENST00000482996 K7ERS5 55 aa5.62□□□□□ -1.51
VARS-225ENST00000482996 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
VARS-225ENST00000482996 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
VARS-225ENST00000482996 A8MU10 97 aa5.58□□□□□ -1.52
VARS-225ENST00000482996 SPRR2EP22531 72 aa5.57□□□□□ -1.52
VARS-225ENST00000482996 SPRR2BP35325 72 aa5.57□□□□□ -1.52
VARS-225ENST00000482996 SPRR2AP35326 72 aa5.57□□□□□ -1.52
VARS-225ENST00000482996 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
VARS-225ENST00000482996 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
VARS-225ENST00000482996 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
VARS-225ENST00000482996 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
VARS-225ENST00000482996 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
VARS-225ENST00000482996 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
VARS-225ENST00000482996 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
VARS-225ENST00000482996 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
VARS-225ENST00000482996 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
VARS-225ENST00000482996 SPRR2DP22532 72 aa5.39□□□□□ -1.55
VARS-225ENST00000482996 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
VARS-225ENST00000482996 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
VARS-225ENST00000482996 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
VARS-225ENST00000482996 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
VARS-225ENST00000482996 ROMO1P60602 79 aa5.24□□□□□ -1.57
VARS-225ENST00000482996 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms