RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 DNAH11Q96DT5 4516 aa5.19□□□□□ -1.58
PRPF4B-206ENST00000481109 LCE2BO14633 110 aa5.18□□□□□ -1.58
PRPF4B-206ENST00000481109 KRTAP13-2Q52LG2 175 aa5.16□□□□□ -1.58
PRPF4B-206ENST00000481109 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
PRPF4B-206ENST00000481109 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
PRPF4B-206ENST00000481109 LRP1BQ9NZR2 4599 aa5.12□□□□□ -1.59
PRPF4B-206ENST00000481109 DMBT1Q9UGM3 2413 aaPredicted RBP5.12□□□□□ -1.59
PRPF4B-206ENST00000481109 INE1O15225 51 aa5.11□□□□□ -1.59
PRPF4B-206ENST00000481109 HYDINQ4G0P3 5121 aa5.1□□□□□ -1.59
PRPF4B-206ENST00000481109 R4GN34 69 aa5.09□□□□□ -1.59
PRPF4B-206ENST00000481109 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
PRPF4B-206ENST00000481109 PKD1P98161 4303 aa5.08□□□□□ -1.6
PRPF4B-206ENST00000481109 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
PRPF4B-206ENST00000481109 LCE2AQ5TA79 106 aaPredicted RBP5.07□□□□□ -1.6
PRPF4B-206ENST00000481109 VPS13BQ7Z7G8 4022 aa5.06□□□□□ -1.6
PRPF4B-206ENST00000481109 M0QZ58 72 aa5.06□□□□□ -1.6
PRPF4B-206ENST00000481109 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
PRPF4B-206ENST00000481109 FAT2Q9NYQ8 4349 aa5.05□□□□□ -1.6
PRPF4B-206ENST00000481109 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
PRPF4B-206ENST00000481109 KRTAP10-1P60331 282 aa5□□□□□ -1.61
PRPF4B-206ENST00000481109 KRTAP10-8P60410 259 aa4.98□□□□□ -1.61
PRPF4B-206ENST00000481109 PKHD1P08F94 4074 aa4.98□□□□□ -1.61
PRPF4B-206ENST00000481109 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
PRPF4B-206ENST00000481109 FAT1Q14517 4588 aa4.88□□□□□ -1.63
PRPF4B-206ENST00000481109 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
PRPF4B-206ENST00000481109 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
PRPF4B-206ENST00000481109 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
PRPF4B-206ENST00000481109 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
PRPF4B-206ENST00000481109 SMR3BP02814 79 aaPredicted RBP4.84□□□□□ -1.63
PRPF4B-206ENST00000481109 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.64
PRPF4B-206ENST00000481109 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-206ENST00000481109 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-206ENST00000481109 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
PRPF4B-206ENST00000481109 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
PRPF4B-206ENST00000481109 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
PRPF4B-206ENST00000481109 KMT2CQ8NEZ4 4911 aaKnown RBP4.69□□□□□ -1.66
PRPF4B-206ENST00000481109 Q5VSD8 79 aa4.68□□□□□ -1.66
PRPF4B-206ENST00000481109 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
PRPF4B-206ENST00000481109 RYR2Q92736 4967 aa4.66□□□□□ -1.66
PRPF4B-206ENST00000481109 HSPG2P98160 4391 aa4.66□□□□□ -1.66
PRPF4B-206ENST00000481109 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
PRPF4B-206ENST00000481109 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
PRPF4B-206ENST00000481109 TNXBP22105 4242 aa4.63□□□□□ -1.67
PRPF4B-206ENST00000481109 RYR3Q15413 4870 aa4.63□□□□□ -1.67
PRPF4B-206ENST00000481109 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
PRPF4B-206ENST00000481109 LPAP08519 4548 aa4.5□□□□□ -1.69
PRPF4B-206ENST00000481109 TNP1P09430 55 aa4.49□□□□□ -1.69
PRPF4B-206ENST00000481109 RYR1P21817 5038 aa4.48□□□□□ -1.69
PRPF4B-206ENST00000481109 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
PRPF4B-206ENST00000481109 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
PRPF4B-206ENST00000481109 LRP2P98164 4655 aa4.43□□□□□ -1.7
PRPF4B-206ENST00000481109 HERC2O95714 4834 aa4.4□□□□□ -1.71
PRPF4B-206ENST00000481109 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
PRPF4B-206ENST00000481109 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
PRPF4B-206ENST00000481109 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
PRPF4B-206ENST00000481109 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
PRPF4B-206ENST00000481109 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
PRPF4B-206ENST00000481109 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
PRPF4B-206ENST00000481109 MUC2Q02817 5179 aa4.16□□□□□ -1.74
PRPF4B-206ENST00000481109 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
PRPF4B-206ENST00000481109 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
PRPF4B-206ENST00000481109 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
PRPF4B-206ENST00000481109 LCE3AQ5TA76 89 aa4.09□□□□□ -1.76
PRPF4B-206ENST00000481109 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
PRPF4B-206ENST00000481109 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
PRPF4B-206ENST00000481109 HERC1Q15751 4861 aa3.97□□□□□ -1.77
PRPF4B-206ENST00000481109 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
PRPF4B-206ENST00000481109 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
PRPF4B-206ENST00000481109 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
PRPF4B-206ENST00000481109 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
PRPF4B-206ENST00000481109 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
PRPF4B-206ENST00000481109 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
PRPF4B-206ENST00000481109 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
PRPF4B-206ENST00000481109 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
PRPF4B-206ENST00000481109 RNF213Q63HN8 5207 aa3.84□□□□□ -1.8
PRPF4B-206ENST00000481109 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
PRPF4B-206ENST00000481109 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
PRPF4B-206ENST00000481109 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
PRPF4B-206ENST00000481109 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
PRPF4B-206ENST00000481109 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
PRPF4B-206ENST00000481109 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
PRPF4B-206ENST00000481109 M0R2T5 61 aa3.68□□□□□ -1.82
PRPF4B-206ENST00000481109 MT1HP80294 61 aa3.66□□□□□ -1.82
PRPF4B-206ENST00000481109 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
PRPF4B-206ENST00000481109 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
PRPF4B-206ENST00000481109 MT1FP04733 61 aa3.63□□□□□ -1.83
PRPF4B-206ENST00000481109 MT2AP02795 61 aa3.61□□□□□ -1.83
PRPF4B-206ENST00000481109 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PRPF4B-206ENST00000481109 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
PRPF4B-206ENST00000481109 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
PRPF4B-206ENST00000481109 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
PRPF4B-206ENST00000481109 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
PRPF4B-206ENST00000481109 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
PRPF4B-206ENST00000481109 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
PRPF4B-206ENST00000481109 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
PRPF4B-206ENST00000481109 MT1BP07438 61 aa3.5□□□□□ -1.85
PRPF4B-206ENST00000481109 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
PRPF4B-206ENST00000481109 MT1XP80297 61 aa3.49□□□□□ -1.85
PRPF4B-206ENST00000481109 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
PRPF4B-206ENST00000481109 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms