RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 LCE2BO14633 110 aa9.59□□□□□ -0.87
VPS36-204ENST00000480923 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
VPS36-204ENST00000480923 SSPOA2VEC9 5147 aa9.56□□□□□ -0.88
VPS36-204ENST00000480923 SNURFQ9Y675 71 aa9.56□□□□□ -0.88
VPS36-204ENST00000480923 KLKP1Q107X0 134 aa9.55□□□□□ -0.88
VPS36-204ENST00000480923 KRTAP3-1Q9BYR8 98 aa9.48□□□□□ -0.89
VPS36-204ENST00000480923 S4R3F8 94 aa9.44□□□□□ -0.9
VPS36-204ENST00000480923 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
VPS36-204ENST00000480923 NDUFC1O43677 76 aa9.42□□□□□ -0.9
VPS36-204ENST00000480923 KRTAP19-1Q8IUB9 90 aa9.4□□□□□ -0.9
VPS36-204ENST00000480923 A8MUN3 132 aa9.38□□□□□ -0.91
VPS36-204ENST00000480923 LCA10Q71F78 164 aa9.36□□□□□ -0.91
VPS36-204ENST00000480923 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
VPS36-204ENST00000480923 SPANXA2-OT1Q8N9U9 137 aa9.35□□□□□ -0.91
VPS36-204ENST00000480923 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
VPS36-204ENST00000480923 H7BZZ5 65 aa9.32□□□□□ -0.92
VPS36-204ENST00000480923 FCGBPQ9Y6R7 5405 aaPredicted RBP9.31□□□□□ -0.92
VPS36-204ENST00000480923 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
VPS36-204ENST00000480923 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
VPS36-204ENST00000480923 ACYP2P14621 99 aa9.24□□□□□ -0.93
VPS36-204ENST00000480923 PCP4P48539 62 aa9.23□□□□□ -0.93
VPS36-204ENST00000480923 KRTAP19-6Q3LI70 58 aa9.23□□□□□ -0.93
VPS36-204ENST00000480923 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
VPS36-204ENST00000480923 KRTAP9-7A8MTY7 169 aa9.15□□□□□ -0.94
VPS36-204ENST00000480923 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
VPS36-204ENST00000480923 TMEM258P61165 79 aa9.13□□□□□ -0.95
VPS36-204ENST00000480923 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
VPS36-204ENST00000480923 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
VPS36-204ENST00000480923 COA5Q86WW8 74 aa9.04□□□□□ -0.96
VPS36-204ENST00000480923 MACF1Q9UPN3 7388 aaKnown RBP9.04□□□□□ -0.96
VPS36-204ENST00000480923 Q5VV11 94 aa9.03□□□□□ -0.96
VPS36-204ENST00000480923 SPTSSBQ8NFR3 76 aa9.02□□□□□ -0.97
VPS36-204ENST00000480923 MT1BP07438 61 aa8.99□□□□□ -0.97
VPS36-204ENST00000480923 KRTAP19-8Q3LI54 63 aa8.99□□□□□ -0.97
VPS36-204ENST00000480923 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
VPS36-204ENST00000480923 H0YAA0 97 aa8.95□□□□□ -0.98
VPS36-204ENST00000480923 A6NN06 94 aa8.89□□□□□ -0.99
VPS36-204ENST00000480923 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
VPS36-204ENST00000480923 SYNE2Q8WXH0 6885 aaKnown RBP8.88□□□□□ -0.99
VPS36-204ENST00000480923 SERP1Q9Y6X1 66 aa8.84□□□□□ -0.99
VPS36-204ENST00000480923 KRTAP10-5P60370 271 aa8.77□□□□□ -1.01
VPS36-204ENST00000480923 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
VPS36-204ENST00000480923 P0C880 135 aa8.69□□□□□ -1.02
VPS36-204ENST00000480923 SEC61GP60059 68 aa8.69□□□□□ -1.02
VPS36-204ENST00000480923 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
VPS36-204ENST00000480923 R4GN34 69 aa8.67□□□□□ -1.02
VPS36-204ENST00000480923 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
VPS36-204ENST00000480923 M0QZ58 72 aa8.61□□□□□ -1.03
VPS36-204ENST00000480923 A0A1B0GU69 56 aa8.58□□□□□ -1.04
VPS36-204ENST00000480923 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
VPS36-204ENST00000480923 LINC01558Q9Y6Z2 57 aa8.57□□□□□ -1.04
VPS36-204ENST00000480923 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
VPS36-204ENST00000480923 PRR15LQ9BU68 103 aa8.54□□□□□ -1.04
VPS36-204ENST00000480923 V9GYY9 64 aa8.53□□□□□ -1.04
VPS36-204ENST00000480923 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
VPS36-204ENST00000480923 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
VPS36-204ENST00000480923 Q1T7F1 81 aa8.48□□□□□ -1.05
VPS36-204ENST00000480923 MT1XP80297 61 aa8.46□□□□□ -1.06
VPS36-204ENST00000480923 A0A1B0GU33 70 aa8.44□□□□□ -1.06
VPS36-204ENST00000480923 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
VPS36-204ENST00000480923 NEBP20929 6669 aa8.36□□□□□ -1.07
VPS36-204ENST00000480923 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
VPS36-204ENST00000480923 PSPHP1O15172 72 aa8.33□□□□□ -1.08
VPS36-204ENST00000480923 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
VPS36-204ENST00000480923 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
VPS36-204ENST00000480923 UQCR11O14957 56 aa8.26□□□□□ -1.09
VPS36-204ENST00000480923 KMT2DO14686 5537 aa8.24□□□□□ -1.09
VPS36-204ENST00000480923 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
VPS36-204ENST00000480923 A0A0D9SG42 100 aa8.18□□□□□ -1.1
VPS36-204ENST00000480923 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
VPS36-204ENST00000480923 SPRR2FQ96RM1 72 aa8.16□□□□□ -1.1
VPS36-204ENST00000480923 MDN1Q9NU22 5596 aa8.15□□□□□ -1.1
VPS36-204ENST00000480923 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
VPS36-204ENST00000480923 A6NED7 52 aa8.11□□□□□ -1.11
VPS36-204ENST00000480923 A8MU10 97 aa8.1□□□□□ -1.11
VPS36-204ENST00000480923 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.11
VPS36-204ENST00000480923 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
VPS36-204ENST00000480923 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
VPS36-204ENST00000480923 KRTAP20-1Q3LI63 56 aa8.05□□□□□ -1.12
VPS36-204ENST00000480923 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
VPS36-204ENST00000480923 SPRR2EP22531 72 aa8.02□□□□□ -1.13
VPS36-204ENST00000480923 SPRR2BP35325 72 aa8.02□□□□□ -1.13
VPS36-204ENST00000480923 SPRR2AP35326 72 aa8.02□□□□□ -1.13
VPS36-204ENST00000480923 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
VPS36-204ENST00000480923 KRTAP12-1P59990 96 aa8□□□□□ -1.13
VPS36-204ENST00000480923 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
VPS36-204ENST00000480923 LCE1AQ5T7P2 110 aa7.9□□□□□ -1.14
VPS36-204ENST00000480923 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
VPS36-204ENST00000480923 K7ERS5 55 aa7.88□□□□□ -1.15
VPS36-204ENST00000480923 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
VPS36-204ENST00000480923 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
VPS36-204ENST00000480923 SPRR2DP22532 72 aa7.76□□□□□ -1.17
VPS36-204ENST00000480923 BRK1Q8WUW1 75 aa7.72□□□□□ -1.17
VPS36-204ENST00000480923 KRTAP2-2Q9BYT5 123 aa7.61□□□□□ -1.19
VPS36-204ENST00000480923 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
VPS36-204ENST00000480923 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
VPS36-204ENST00000480923 KRTAP19-7Q3SYF9 63 aa7.54□□□□□ -1.2
VPS36-204ENST00000480923 LCE3BQ5TA77 95 aa7.52□□□□□ -1.21
VPS36-204ENST00000480923 MT1EP04732 61 aa7.49□□□□□ -1.21
VPS36-204ENST00000480923 TNP1P09430 55 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms