RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 SPRR2EP22531 72 aa3.95□□□□□ -1.78
TTC3-216ENST00000479930 SPRR2BP35325 72 aa3.95□□□□□ -1.78
TTC3-216ENST00000479930 SPRR2AP35326 72 aa3.95□□□□□ -1.78
TTC3-216ENST00000479930 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
TTC3-216ENST00000479930 CSMD1Q96PZ7 3565 aa3.92□□□□□ -1.78
TTC3-216ENST00000479930 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
TTC3-216ENST00000479930 KMT2AQ03164 3969 aa3.83□□□□□ -1.8
TTC3-216ENST00000479930 SPRR2DP22532 72 aa3.83□□□□□ -1.8
TTC3-216ENST00000479930 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
TTC3-216ENST00000479930 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
TTC3-216ENST00000479930 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
TTC3-216ENST00000479930 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
TTC3-216ENST00000479930 MUC3AQ02505 3323 aa3.74□□□□□ -1.81
TTC3-216ENST00000479930 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
TTC3-216ENST00000479930 SVEP1Q4LDE5 3571 aa3.7□□□□□ -1.82
TTC3-216ENST00000479930 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
TTC3-216ENST00000479930 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
TTC3-216ENST00000479930 PRKDCP78527 4128 aaKnown RBP3.65□□□□□ -1.83
TTC3-216ENST00000479930 CSMD2Q7Z408 3487 aa3.63□□□□□ -1.83
TTC3-216ENST00000479930 LCE2BO14633 110 aa3.63□□□□□ -1.83
TTC3-216ENST00000479930 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
TTC3-216ENST00000479930 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
TTC3-216ENST00000479930 CUBNO60494 3623 aa3.6□□□□□ -1.83
TTC3-216ENST00000479930 KRTAP3-1Q9BYR8 98 aa3.6□□□□□ -1.83
TTC3-216ENST00000479930 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
TTC3-216ENST00000479930 LCE2CQ5TA81 110 aa3.59□□□□□ -1.83
TTC3-216ENST00000479930 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
TTC3-216ENST00000479930 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
TTC3-216ENST00000479930 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
TTC3-216ENST00000479930 MT4P47944 62 aa3.47□□□□□ -1.85
TTC3-216ENST00000479930 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
TTC3-216ENST00000479930 MT1HP80294 61 aa3.44□□□□□ -1.86
TTC3-216ENST00000479930 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
TTC3-216ENST00000479930 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
TTC3-216ENST00000479930 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
TTC3-216ENST00000479930 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
TTC3-216ENST00000479930 MT1GP13640 62 aa3.34□□□□□ -1.87
TTC3-216ENST00000479930 KRTAP3-2Q9BYR7 98 aa3.33□□□□□ -1.88
TTC3-216ENST00000479930 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
TTC3-216ENST00000479930 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
TTC3-216ENST00000479930 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
TTC3-216ENST00000479930 MT2AP02795 61 aa3.28□□□□□ -1.88
TTC3-216ENST00000479930 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
TTC3-216ENST00000479930 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
TTC3-216ENST00000479930 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
TTC3-216ENST00000479930 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
TTC3-216ENST00000479930 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
TTC3-216ENST00000479930 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
TTC3-216ENST00000479930 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
TTC3-216ENST00000479930 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
TTC3-216ENST00000479930 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
TTC3-216ENST00000479930 MT1FP04733 61 aa3.18□□□□□ -1.9
TTC3-216ENST00000479930 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
TTC3-216ENST00000479930 MT3P25713 68 aa3.13□□□□□ -1.91
TTC3-216ENST00000479930 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
TTC3-216ENST00000479930 DNAH10Q8IVF4 4471 aa3.1□□□□□ -1.91
TTC3-216ENST00000479930 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
TTC3-216ENST00000479930 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
TTC3-216ENST00000479930 VPS13DQ5THJ4 4388 aa3□□□□□ -1.93
TTC3-216ENST00000479930 PKHD1L1Q86WI1 4243 aa2.99□□□□□ -1.93
TTC3-216ENST00000479930 FAT2Q9NYQ8 4349 aa2.96□□□□□ -1.94
TTC3-216ENST00000479930 LCE2AQ5TA79 106 aaPredicted RBP2.95□□□□□ -1.94
TTC3-216ENST00000479930 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
TTC3-216ENST00000479930 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
TTC3-216ENST00000479930 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
TTC3-216ENST00000479930 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
TTC3-216ENST00000479930 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
TTC3-216ENST00000479930 HSPG2P98160 4391 aa2.91□□□□□ -1.94
TTC3-216ENST00000479930 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
TTC3-216ENST00000479930 TNXBP22105 4242 aa2.9□□□□□ -1.94
TTC3-216ENST00000479930 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
TTC3-216ENST00000479930 PKD1P98161 4303 aa2.9□□□□□ -1.95
TTC3-216ENST00000479930 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
TTC3-216ENST00000479930 PRM1P04553 51 aa2.87□□□□□ -1.95
TTC3-216ENST00000479930 ANK3Q12955 4377 aaKnown RBP2.87□□□□□ -1.95
TTC3-216ENST00000479930 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
TTC3-216ENST00000479930 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
TTC3-216ENST00000479930 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
TTC3-216ENST00000479930 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
TTC3-216ENST00000479930 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
TTC3-216ENST00000479930 LOC100996750A0A140TA64 210 aa2.76□□□□□ -1.97
TTC3-216ENST00000479930 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
TTC3-216ENST00000479930 MT1XP80297 61 aa2.71□□□□□ -1.98
TTC3-216ENST00000479930 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
TTC3-216ENST00000479930 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
TTC3-216ENST00000479930 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
TTC3-216ENST00000479930 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
TTC3-216ENST00000479930 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
TTC3-216ENST00000479930 MT1BP07438 61 aa2.61□□□□□ -1.99
TTC3-216ENST00000479930 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
TTC3-216ENST00000479930 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
TTC3-216ENST00000479930 MT1LQ93083 61 aa2.59□□□□□ -1.99
TTC3-216ENST00000479930 MT1MQ8N339 61 aa2.59□□□□□ -2
TTC3-216ENST00000479930 RYR1P21817 5038 aa2.59□□□□□ -2
TTC3-216ENST00000479930 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
TTC3-216ENST00000479930 KRTAP9-3Q9BYQ3 159 aa2.54□□□□□ -2
TTC3-216ENST00000479930 MT1EP04732 61 aa2.54□□□□□ -2
TTC3-216ENST00000479930 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
TTC3-216ENST00000479930 LRP1Q07954 4544 aaKnown RBP2.54□□□□□ -2
TTC3-216ENST00000479930 KRTAP9-8Q9BYQ0 159 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms