RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SSPOA2VEC9 5147 aa7.11□□□□□ -1.27
ATG4B-218ENST00000479554 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
ATG4B-218ENST00000479554 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
ATG4B-218ENST00000479554 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
ATG4B-218ENST00000479554 MT1FP04733 61 aa7.06□□□□□ -1.28
ATG4B-218ENST00000479554 SPINK7P58062 85 aa7.06□□□□□ -1.28
ATG4B-218ENST00000479554 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
ATG4B-218ENST00000479554 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
ATG4B-218ENST00000479554 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
ATG4B-218ENST00000479554 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
ATG4B-218ENST00000479554 LCE2BO14633 110 aa6.99□□□□□ -1.29
ATG4B-218ENST00000479554 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
ATG4B-218ENST00000479554 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
ATG4B-218ENST00000479554 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
ATG4B-218ENST00000479554 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
ATG4B-218ENST00000479554 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
ATG4B-218ENST00000479554 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
ATG4B-218ENST00000479554 DMAC1Q96GE9 116 aa6.89□□□□□ -1.31
ATG4B-218ENST00000479554 ACYP2P14621 99 aa6.87□□□□□ -1.31
ATG4B-218ENST00000479554 A8MUN3 132 aa6.85□□□□□ -1.31
ATG4B-218ENST00000479554 COA5Q86WW8 74 aa6.85□□□□□ -1.31
ATG4B-218ENST00000479554 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
ATG4B-218ENST00000479554 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
ATG4B-218ENST00000479554 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
ATG4B-218ENST00000479554 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
ATG4B-218ENST00000479554 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
ATG4B-218ENST00000479554 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
ATG4B-218ENST00000479554 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
ATG4B-218ENST00000479554 V9GYY9 64 aa6.68□□□□□ -1.34
ATG4B-218ENST00000479554 Q1T7F1 81 aa6.67□□□□□ -1.34
ATG4B-218ENST00000479554 SYNE2Q8WXH0 6885 aaKnown RBP6.66□□□□□ -1.34
ATG4B-218ENST00000479554 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
ATG4B-218ENST00000479554 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
ATG4B-218ENST00000479554 S4R3F8 94 aa6.58□□□□□ -1.36
ATG4B-218ENST00000479554 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
ATG4B-218ENST00000479554 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
ATG4B-218ENST00000479554 LCA10Q71F78 164 aa6.53□□□□□ -1.36
ATG4B-218ENST00000479554 PSPHP1O15172 72 aa6.52□□□□□ -1.37
ATG4B-218ENST00000479554 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
ATG4B-218ENST00000479554 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
ATG4B-218ENST00000479554 A0A1B0GU69 56 aa6.48□□□□□ -1.37
ATG4B-218ENST00000479554 SEC61GP60059 68 aa6.47□□□□□ -1.37
ATG4B-218ENST00000479554 Q5VV11 94 aa6.47□□□□□ -1.37
ATG4B-218ENST00000479554 MT1BP07438 61 aa6.45□□□□□ -1.38
ATG4B-218ENST00000479554 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
ATG4B-218ENST00000479554 A6NN06 94 aa6.44□□□□□ -1.38
ATG4B-218ENST00000479554 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
ATG4B-218ENST00000479554 A6NED7 52 aa6.35□□□□□ -1.39
ATG4B-218ENST00000479554 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
ATG4B-218ENST00000479554 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
ATG4B-218ENST00000479554 H0YAA0 97 aa6.31□□□□□ -1.4
ATG4B-218ENST00000479554 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
ATG4B-218ENST00000479554 UQCR11O14957 56 aa6.3□□□□□ -1.4
ATG4B-218ENST00000479554 NEBP20929 6669 aa6.29□□□□□ -1.4
ATG4B-218ENST00000479554 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
ATG4B-218ENST00000479554 A0A1B0GU33 70 aa6.28□□□□□ -1.4
ATG4B-218ENST00000479554 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
ATG4B-218ENST00000479554 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
ATG4B-218ENST00000479554 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
ATG4B-218ENST00000479554 P0C880 135 aa6.22□□□□□ -1.41
ATG4B-218ENST00000479554 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
ATG4B-218ENST00000479554 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
ATG4B-218ENST00000479554 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
ATG4B-218ENST00000479554 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
ATG4B-218ENST00000479554 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
ATG4B-218ENST00000479554 KMT2DO14686 5537 aa6.16□□□□□ -1.42
ATG4B-218ENST00000479554 A8MU10 97 aa6.14□□□□□ -1.43
ATG4B-218ENST00000479554 M0QZ58 72 aa6.12□□□□□ -1.43
ATG4B-218ENST00000479554 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
ATG4B-218ENST00000479554 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
ATG4B-218ENST00000479554 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
ATG4B-218ENST00000479554 R4GN34 69 aa6.06□□□□□ -1.44
ATG4B-218ENST00000479554 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
ATG4B-218ENST00000479554 MT1XP80297 61 aa6.02□□□□□ -1.45
ATG4B-218ENST00000479554 A0A0D9SG42 100 aa6.01□□□□□ -1.45
ATG4B-218ENST00000479554 K7ERS5 55 aa5.98□□□□□ -1.45
ATG4B-218ENST00000479554 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
ATG4B-218ENST00000479554 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
ATG4B-218ENST00000479554 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
ATG4B-218ENST00000479554 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
ATG4B-218ENST00000479554 SPRR2EP22531 72 aa5.91□□□□□ -1.46
ATG4B-218ENST00000479554 SPRR2BP35325 72 aa5.91□□□□□ -1.46
ATG4B-218ENST00000479554 SPRR2AP35326 72 aa5.91□□□□□ -1.46
ATG4B-218ENST00000479554 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
ATG4B-218ENST00000479554 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
ATG4B-218ENST00000479554 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
ATG4B-218ENST00000479554 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
ATG4B-218ENST00000479554 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
ATG4B-218ENST00000479554 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
ATG4B-218ENST00000479554 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
ATG4B-218ENST00000479554 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
ATG4B-218ENST00000479554 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
ATG4B-218ENST00000479554 SPRR2DP22532 72 aa5.73□□□□□ -1.49
ATG4B-218ENST00000479554 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
ATG4B-218ENST00000479554 ROMO1P60602 79 aa5.71□□□□□ -1.5
ATG4B-218ENST00000479554 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
ATG4B-218ENST00000479554 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
ATG4B-218ENST00000479554 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
ATG4B-218ENST00000479554 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
ATG4B-218ENST00000479554 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms