RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 LOC110117498A0A087WWA1 95 aa3.23□□□□□ -1.89
GAPVD1-217ENST00000479511 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
GAPVD1-217ENST00000479511 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
GAPVD1-217ENST00000479511 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
GAPVD1-217ENST00000479511 C22orf24Q9Y442 160 aa3.23□□□□□ -1.89
GAPVD1-217ENST00000479511 TRBV7-7A0A0K0K1E9 115 aa3.22□□□□□ -1.89
GAPVD1-217ENST00000479511 F8WEM9 126 aa3.21□□□□□ -1.9
GAPVD1-217ENST00000479511 Q6ZRX8 168 aa3.21□□□□□ -1.9
GAPVD1-217ENST00000479511 SPRR1AP35321 89 aa3.2□□□□□ -1.9
GAPVD1-217ENST00000479511 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
GAPVD1-217ENST00000479511 Q6JHZ5 121 aa3.2□□□□□ -1.9
GAPVD1-217ENST00000479511 TMEM254Q8TBM7 123 aa3.2□□□□□ -1.9
GAPVD1-217ENST00000479511 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
GAPVD1-217ENST00000479511 A0A096LNI7 61 aa3.18□□□□□ -1.9
GAPVD1-217ENST00000479511 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
GAPVD1-217ENST00000479511 hDV103S1A0JD37 113 aa3.18□□□□□ -1.9
GAPVD1-217ENST00000479511 DEFB105AQ8NG35 78 aa3.18□□□□□ -1.9
GAPVD1-217ENST00000479511 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
GAPVD1-217ENST00000479511 LRP2P98164 4655 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 IGLV5-48A0A075B6I7 105 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 ATOX1O00244 68 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 NREPQ16612 68 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
GAPVD1-217ENST00000479511 BCE1O60756 84 aa3.16□□□□□ -1.9
GAPVD1-217ENST00000479511 HAMPP81172 84 aa3.16□□□□□ -1.9
GAPVD1-217ENST00000479511 FAM236AA0A1B0GUQ0 79 aa3.15□□□□□ -1.91
GAPVD1-217ENST00000479511 FAM236BA0A1B0GV22 79 aa3.15□□□□□ -1.91
GAPVD1-217ENST00000479511 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.91
GAPVD1-217ENST00000479511 A0A087WSZ3 146 aa3.14□□□□□ -1.91
GAPVD1-217ENST00000479511 IGKV3D-7A0A0C4DH55 119 aa3.14□□□□□ -1.91
GAPVD1-217ENST00000479511 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
GAPVD1-217ENST00000479511 UQCRQO14949 82 aa3.13□□□□□ -1.91
GAPVD1-217ENST00000479511 RPL37AP61513 92 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-217ENST00000479511 Q6ZSA8 131 aa3.13□□□□□ -1.91
GAPVD1-217ENST00000479511 SPRR1BP22528 89 aa3.12□□□□□ -1.91
GAPVD1-217ENST00000479511 SPRR4Q96PI1 79 aa3.12□□□□□ -1.91
GAPVD1-217ENST00000479511 ERC2-IT1O76042 136 aa3.11□□□□□ -1.91
GAPVD1-217ENST00000479511 PRLHP81277 87 aa3.11□□□□□ -1.91
GAPVD1-217ENST00000479511 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
GAPVD1-217ENST00000479511 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
GAPVD1-217ENST00000479511 TNXBP22105 4242 aa3.11□□□□□ -1.91
GAPVD1-217ENST00000479511 COX7CP15954 63 aa3.1□□□□□ -1.91
GAPVD1-217ENST00000479511 KRTAP13-1Q8IUC0 172 aa3.1□□□□□ -1.91
GAPVD1-217ENST00000479511 C9orf153Q5TBE3 101 aa3.09□□□□□ -1.91
GAPVD1-217ENST00000479511 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
GAPVD1-217ENST00000479511 A0A087WVE0 104 aa3.07□□□□□ -1.92
GAPVD1-217ENST00000479511 NDUFB1O75438 58 aa3.07□□□□□ -1.92
GAPVD1-217ENST00000479511 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
GAPVD1-217ENST00000479511 NDUFC1O43677 76 aa3.06□□□□□ -1.92
GAPVD1-217ENST00000479511 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
GAPVD1-217ENST00000479511 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-217ENST00000479511 SSBP3-AS1Q7Z2R9 100 aa3.04□□□□□ -1.92
GAPVD1-217ENST00000479511 HCG22E2RYF7 251 aa3.02□□□□□ -1.93
GAPVD1-217ENST00000479511 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
GAPVD1-217ENST00000479511 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
GAPVD1-217ENST00000479511 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
GAPVD1-217ENST00000479511 KLKP1Q107X0 134 aa3□□□□□ -1.93
GAPVD1-217ENST00000479511 LINC00472Q9H8W2 130 aa3□□□□□ -1.93
GAPVD1-217ENST00000479511 TP53AIP1Q9HCN2 124 aa3□□□□□ -1.93
GAPVD1-217ENST00000479511 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
GAPVD1-217ENST00000479511 K7EQZ3 153 aa2.99□□□□□ -1.93
GAPVD1-217ENST00000479511 CASC2Q6XLA1 102 aa2.99□□□□□ -1.93
GAPVD1-217ENST00000479511 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
GAPVD1-217ENST00000479511 LIMD2Q9BT23 127 aa2.99□□□□□ -1.93
GAPVD1-217ENST00000479511 LPAP08519 4548 aa2.98□□□□□ -1.93
GAPVD1-217ENST00000479511 A6NN06 94 aa2.98□□□□□ -1.93
GAPVD1-217ENST00000479511 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
GAPVD1-217ENST00000479511 SPINK6Q6UWN8 80 aa2.98□□□□□ -1.93
GAPVD1-217ENST00000479511 ASB16-AS1Q495Z4 193 aa2.97□□□□□ -1.93
GAPVD1-217ENST00000479511 SPAG11AQ6PDA7 123 aa2.96□□□□□ -1.94
GAPVD1-217ENST00000479511 WFDC13Q8IUB5 93 aa2.96□□□□□ -1.94
GAPVD1-217ENST00000479511 SPINK1P00995 79 aa2.95□□□□□ -1.94
GAPVD1-217ENST00000479511 SNURFQ9Y675 71 aa2.95□□□□□ -1.94
GAPVD1-217ENST00000479511 SERP1Q9Y6X1 66 aa2.94□□□□□ -1.94
GAPVD1-217ENST00000479511 H7BZZ5 65 aa2.93□□□□□ -1.94
GAPVD1-217ENST00000479511 RPS29P62273 56 aaKnown RBP2.93□□□□□ -1.94
GAPVD1-217ENST00000479511 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
GAPVD1-217ENST00000479511 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
GAPVD1-217ENST00000479511 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
GAPVD1-217ENST00000479511 H0Y9P7 68 aa2.92□□□□□ -1.94
GAPVD1-217ENST00000479511 Q96NJ1 140 aa2.92□□□□□ -1.94
GAPVD1-217ENST00000479511 MRPL34Q9BQ48 92 aaKnown RBP2.92□□□□□ -1.94
GAPVD1-217ENST00000479511 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
GAPVD1-217ENST00000479511 LINC00208Q96KT6 92 aa2.91□□□□□ -1.94
GAPVD1-217ENST00000479511 LOC101927531A0A1B0GV80 90 aa2.89□□□□□ -1.95
GAPVD1-217ENST00000479511 CYSTM1Q9H1C7 97 aa2.89□□□□□ -1.95
GAPVD1-217ENST00000479511 INE1O15225 51 aa2.88□□□□□ -1.95
GAPVD1-217ENST00000479511 CYP4F30PQ9H0H9 118 aa2.87□□□□□ -1.95
GAPVD1-217ENST00000479511 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
GAPVD1-217ENST00000479511 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
GAPVD1-217ENST00000479511 ACYP2P14621 99 aa2.81□□□□□ -1.96
GAPVD1-217ENST00000479511 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
GAPVD1-217ENST00000479511 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
GAPVD1-217ENST00000479511 CHKB-CPT1BH3BT56 60 aa2.78□□□□□ -1.96
GAPVD1-217ENST00000479511 CSAG1Q6PB30 78 aa2.78□□□□□ -1.96
GAPVD1-217ENST00000479511 SPTSSBQ8NFR3 76 aa2.76□□□□□ -1.97
GAPVD1-217ENST00000479511 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms