RNA–Protein interactions for RNA: ENST00000477814.5

HDAC10-212, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 1,784 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-212ENST00000477814 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
HDAC10-212ENST00000477814 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.74
HDAC10-212ENST00000477814 A0A1B0GU69 56 aa10.45□□□□□ -0.74
HDAC10-212ENST00000477814 A6NED7 52 aa10.44□□□□□ -0.74
HDAC10-212ENST00000477814 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
HDAC10-212ENST00000477814 MUC17Q685J3 4493 aa10.41□□□□□ -0.74
HDAC10-212ENST00000477814 A8MU10 97 aa10.35□□□□□ -0.75
HDAC10-212ENST00000477814 LCA10Q71F78 164 aa10.34□□□□□ -0.75
HDAC10-212ENST00000477814 KRTAP4-1Q9BYQ7 146 aa10.32□□□□□ -0.76
HDAC10-212ENST00000477814 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
HDAC10-212ENST00000477814 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
HDAC10-212ENST00000477814 SEC61GP60059 68 aa10.27□□□□□ -0.77
HDAC10-212ENST00000477814 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
HDAC10-212ENST00000477814 S4R3F8 94 aa10.21□□□□□ -0.78
HDAC10-212ENST00000477814 UQCR11O14957 56 aa10.2□□□□□ -0.78
HDAC10-212ENST00000477814 H1FX-AS1Q4G0G2 97 aa10.2□□□□□ -0.78
HDAC10-212ENST00000477814 SPATA8Q6RVD6 105 aa10.15□□□□□ -0.78
HDAC10-212ENST00000477814 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
HDAC10-212ENST00000477814 MUC2Q02817 5179 aa10.07□□□□□ -0.8
HDAC10-212ENST00000477814 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
HDAC10-212ENST00000477814 KRTAP19-2Q3LHN2 52 aa10.06□□□□□ -0.8
HDAC10-212ENST00000477814 A0A1B0GU33 70 aa10.03□□□□□ -0.8
HDAC10-212ENST00000477814 PMAIP1Q13794 54 aa10.01□□□□□ -0.81
HDAC10-212ENST00000477814 RNF213Q63HN8 5207 aa10□□□□□ -0.81
HDAC10-212ENST00000477814 H0YAA0 97 aa9.96□□□□□ -0.81
HDAC10-212ENST00000477814 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.81
HDAC10-212ENST00000477814 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
HDAC10-212ENST00000477814 A6NN06 94 aa9.93□□□□□ -0.82
HDAC10-212ENST00000477814 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
HDAC10-212ENST00000477814 FLGP20930 4061 aaPredicted RBP9.83□□□□□ -0.84
HDAC10-212ENST00000477814 P0C880 135 aa9.82□□□□□ -0.84
HDAC10-212ENST00000477814 LCE2CQ5TA81 110 aa9.82□□□□□ -0.84
HDAC10-212ENST00000477814 ADM2Q7Z4H4 148 aa9.82□□□□□ -0.84
HDAC10-212ENST00000477814 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
HDAC10-212ENST00000477814 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
HDAC10-212ENST00000477814 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.86
HDAC10-212ENST00000477814 MT1HP80294 61 aa9.65□□□□□ -0.87
HDAC10-212ENST00000477814 M0R2T5 61 aa9.61□□□□□ -0.87
HDAC10-212ENST00000477814 A0A0D9SG42 100 aa9.59□□□□□ -0.87
HDAC10-212ENST00000477814 K7ERS5 55 aa9.56□□□□□ -0.88
HDAC10-212ENST00000477814 M0QZ58 72 aa9.56□□□□□ -0.88
HDAC10-212ENST00000477814 R4GN34 69 aa9.42□□□□□ -0.9
HDAC10-212ENST00000477814 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
HDAC10-212ENST00000477814 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
HDAC10-212ENST00000477814 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
HDAC10-212ENST00000477814 KRTAP12-1P59990 96 aa9.38□□□□□ -0.91
HDAC10-212ENST00000477814 PRAC1Q96KF2 57 aa9.38□□□□□ -0.91
HDAC10-212ENST00000477814 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
HDAC10-212ENST00000477814 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
HDAC10-212ENST00000477814 KRTAP9-8Q9BYQ0 159 aa9.27□□□□□ -0.92
HDAC10-212ENST00000477814 ROMO1P60602 79 aa9.26□□□□□ -0.93
HDAC10-212ENST00000477814 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
HDAC10-212ENST00000477814 MT2AP02795 61 aa9.24□□□□□ -0.93
HDAC10-212ENST00000477814 KRTAP10-10P60014 251 aa9.19□□□□□ -0.94
HDAC10-212ENST00000477814 MT1FP04733 61 aa9.17□□□□□ -0.94
HDAC10-212ENST00000477814 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
HDAC10-212ENST00000477814 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
HDAC10-212ENST00000477814 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
HDAC10-212ENST00000477814 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
HDAC10-212ENST00000477814 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
HDAC10-212ENST00000477814 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
HDAC10-212ENST00000477814 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
HDAC10-212ENST00000477814 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
HDAC10-212ENST00000477814 LCE2BO14633 110 aa8.69□□□□□ -1.02
HDAC10-212ENST00000477814 MT1BP07438 61 aa8.69□□□□□ -1.02
HDAC10-212ENST00000477814 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
HDAC10-212ENST00000477814 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
HDAC10-212ENST00000477814 TNP1P09430 55 aa8.49□□□□□ -1.05
HDAC10-212ENST00000477814 USH2AO75445 5202 aa8.47□□□□□ -1.05
HDAC10-212ENST00000477814 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
HDAC10-212ENST00000477814 MT1XP80297 61 aa8.41□□□□□ -1.06
HDAC10-212ENST00000477814 KRTAP10-5P60370 271 aa8.4□□□□□ -1.07
HDAC10-212ENST00000477814 PRO2289Q9P1D8 64 aa8.38□□□□□ -1.07
HDAC10-212ENST00000477814 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
HDAC10-212ENST00000477814 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
HDAC10-212ENST00000477814 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
HDAC10-212ENST00000477814 SSPOA2VEC9 5147 aa8.2□□□□□ -1.1
HDAC10-212ENST00000477814 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
HDAC10-212ENST00000477814 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
HDAC10-212ENST00000477814 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
HDAC10-212ENST00000477814 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
HDAC10-212ENST00000477814 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
HDAC10-212ENST00000477814 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
HDAC10-212ENST00000477814 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
HDAC10-212ENST00000477814 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
HDAC10-212ENST00000477814 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
HDAC10-212ENST00000477814 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
HDAC10-212ENST00000477814 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
HDAC10-212ENST00000477814 KMT2DO14686 5537 aa7.69□□□□□ -1.18
HDAC10-212ENST00000477814 SPRR5A0A1B0GTR4 108 aa7.65□□□□□ -1.18
HDAC10-212ENST00000477814 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
HDAC10-212ENST00000477814 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
HDAC10-212ENST00000477814 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
HDAC10-212ENST00000477814 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
HDAC10-212ENST00000477814 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
HDAC10-212ENST00000477814 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
HDAC10-212ENST00000477814 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
HDAC10-212ENST00000477814 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
HDAC10-212ENST00000477814 MT1EP04732 61 aa7.37□□□□□ -1.23
HDAC10-212ENST00000477814 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms