RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
HDAC6-221ENST00000477561 IGKV2-30P06310 120 aa4.21□□□□□ -1.74
HDAC6-221ENST00000477561 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
HDAC6-221ENST00000477561 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
HDAC6-221ENST00000477561 SEC61GP60059 68 aa4.19□□□□□ -1.74
HDAC6-221ENST00000477561 TMEM258P61165 79 aa4.19□□□□□ -1.74
HDAC6-221ENST00000477561 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
HDAC6-221ENST00000477561 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
HDAC6-221ENST00000477561 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
HDAC6-221ENST00000477561 FAM236DA0A1B0GTK5 79 aa4.18□□□□□ -1.74
HDAC6-221ENST00000477561 H7BZZ5 65 aa4.18□□□□□ -1.74
HDAC6-221ENST00000477561 FAM236CP0DP71 79 aa4.18□□□□□ -1.74
HDAC6-221ENST00000477561 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
HDAC6-221ENST00000477561 HRES1P13985 223 aa4.17□□□□□ -1.74
HDAC6-221ENST00000477561 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
HDAC6-221ENST00000477561 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
HDAC6-221ENST00000477561 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
HDAC6-221ENST00000477561 SPINK7P58062 85 aa4.15□□□□□ -1.75
HDAC6-221ENST00000477561 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.75
HDAC6-221ENST00000477561 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
HDAC6-221ENST00000477561 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
HDAC6-221ENST00000477561 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
HDAC6-221ENST00000477561 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
HDAC6-221ENST00000477561 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
HDAC6-221ENST00000477561 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
HDAC6-221ENST00000477561 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
HDAC6-221ENST00000477561 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
HDAC6-221ENST00000477561 V9GYY9 64 aa4.08□□□□□ -1.76
HDAC6-221ENST00000477561 A8MUN3 132 aa4.07□□□□□ -1.76
HDAC6-221ENST00000477561 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
HDAC6-221ENST00000477561 MT2AP02795 61 aa4.06□□□□□ -1.76
HDAC6-221ENST00000477561 ACYP2P14621 99 aa4.06□□□□□ -1.76
HDAC6-221ENST00000477561 C4orf26Q17RF5 130 aa4.06□□□□□ -1.76
HDAC6-221ENST00000477561 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
HDAC6-221ENST00000477561 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
HDAC6-221ENST00000477561 MT1FP04733 61 aa4.03□□□□□ -1.76
HDAC6-221ENST00000477561 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
HDAC6-221ENST00000477561 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
HDAC6-221ENST00000477561 COA5Q86WW8 74 aa4.01□□□□□ -1.77
HDAC6-221ENST00000477561 USH2AO75445 5202 aa4.01□□□□□ -1.77
HDAC6-221ENST00000477561 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
HDAC6-221ENST00000477561 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
HDAC6-221ENST00000477561 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
HDAC6-221ENST00000477561 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
HDAC6-221ENST00000477561 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.78
HDAC6-221ENST00000477561 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
HDAC6-221ENST00000477561 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
HDAC6-221ENST00000477561 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
HDAC6-221ENST00000477561 S4R3F8 94 aa3.93□□□□□ -1.78
HDAC6-221ENST00000477561 LCA10Q71F78 164 aa3.88□□□□□ -1.79
HDAC6-221ENST00000477561 Q1T7F1 81 aa3.87□□□□□ -1.79
HDAC6-221ENST00000477561 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
HDAC6-221ENST00000477561 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
HDAC6-221ENST00000477561 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
HDAC6-221ENST00000477561 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-221ENST00000477561 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
HDAC6-221ENST00000477561 A0A1B0GU69 56 aa3.82□□□□□ -1.8
HDAC6-221ENST00000477561 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
HDAC6-221ENST00000477561 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
HDAC6-221ENST00000477561 PSPHP1O15172 72 aa3.78□□□□□ -1.8
HDAC6-221ENST00000477561 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
HDAC6-221ENST00000477561 H0YAA0 97 aa3.76□□□□□ -1.81
HDAC6-221ENST00000477561 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
HDAC6-221ENST00000477561 Q5VV11 94 aa3.74□□□□□ -1.81
HDAC6-221ENST00000477561 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
HDAC6-221ENST00000477561 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
HDAC6-221ENST00000477561 A0A1B0GU33 70 aa3.7□□□□□ -1.82
HDAC6-221ENST00000477561 UQCR11O14957 56 aa3.7□□□□□ -1.82
HDAC6-221ENST00000477561 MT1BP07438 61 aa3.7□□□□□ -1.82
HDAC6-221ENST00000477561 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
HDAC6-221ENST00000477561 A6NED7 52 aa3.69□□□□□ -1.82
HDAC6-221ENST00000477561 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
HDAC6-221ENST00000477561 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
HDAC6-221ENST00000477561 P0C880 135 aa3.67□□□□□ -1.82
HDAC6-221ENST00000477561 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
HDAC6-221ENST00000477561 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
HDAC6-221ENST00000477561 A6NN06 94 aa3.65□□□□□ -1.83
HDAC6-221ENST00000477561 M0QZ58 72 aa3.65□□□□□ -1.83
HDAC6-221ENST00000477561 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
HDAC6-221ENST00000477561 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
HDAC6-221ENST00000477561 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
HDAC6-221ENST00000477561 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
HDAC6-221ENST00000477561 R4GN34 69 aa3.62□□□□□ -1.83
HDAC6-221ENST00000477561 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
HDAC6-221ENST00000477561 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
HDAC6-221ENST00000477561 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
HDAC6-221ENST00000477561 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
HDAC6-221ENST00000477561 A0A0D9SG42 100 aa3.54□□□□□ -1.84
HDAC6-221ENST00000477561 A8MU10 97 aa3.54□□□□□ -1.84
HDAC6-221ENST00000477561 K7ERS5 55 aa3.54□□□□□ -1.84
HDAC6-221ENST00000477561 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
HDAC6-221ENST00000477561 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
HDAC6-221ENST00000477561 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
HDAC6-221ENST00000477561 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
HDAC6-221ENST00000477561 NEBP20929 6669 aa3.47□□□□□ -1.85
HDAC6-221ENST00000477561 MT1XP80297 61 aa3.47□□□□□ -1.85
HDAC6-221ENST00000477561 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
HDAC6-221ENST00000477561 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
HDAC6-221ENST00000477561 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
HDAC6-221ENST00000477561 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms