RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 NDUFS5O43920 106 aa4.15□□□□□ -1.75
COL4A5-204ENST00000477429 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
COL4A5-204ENST00000477429 IMUPQ9GZP8 106 aa4.15□□□□□ -1.75
COL4A5-204ENST00000477429 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
COL4A5-204ENST00000477429 S4R3F8 94 aa4.14□□□□□ -1.75
COL4A5-204ENST00000477429 MT1XP80297 61 aa4.13□□□□□ -1.75
COL4A5-204ENST00000477429 CXCL6P80162 114 aa4.12□□□□□ -1.75
COL4A5-204ENST00000477429 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
COL4A5-204ENST00000477429 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
COL4A5-204ENST00000477429 LOC110117498A0A087WWA1 95 aa4.11□□□□□ -1.75
COL4A5-204ENST00000477429 COX6CP09669 75 aa4.11□□□□□ -1.75
COL4A5-204ENST00000477429 VAMP8Q9BV40 100 aa4.11□□□□□ -1.75
COL4A5-204ENST00000477429 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
COL4A5-204ENST00000477429 HSD52Q0P140 79 aa4.1□□□□□ -1.75
COL4A5-204ENST00000477429 C14orf132Q9NPU4 83 aa4.1□□□□□ -1.75
COL4A5-204ENST00000477429 A0A087WVE0 104 aa4.09□□□□□ -1.75
COL4A5-204ENST00000477429 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
COL4A5-204ENST00000477429 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
COL4A5-204ENST00000477429 NREPQ16612 68 aa4.08□□□□□ -1.76
COL4A5-204ENST00000477429 Q8N9L7 120 aa4.07□□□□□ -1.76
COL4A5-204ENST00000477429 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
COL4A5-204ENST00000477429 HCG22E2RYF7 251 aa4.06□□□□□ -1.76
COL4A5-204ENST00000477429 A0A1B0GW54 56 aa4.05□□□□□ -1.76
COL4A5-204ENST00000477429 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
COL4A5-204ENST00000477429 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
COL4A5-204ENST00000477429 JMJD7-PLA2G4BH0Y9G9 81 aa4.03□□□□□ -1.76
COL4A5-204ENST00000477429 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
COL4A5-204ENST00000477429 CASC2Q6XLA1 102 aa4.01□□□□□ -1.77
COL4A5-204ENST00000477429 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
COL4A5-204ENST00000477429 BPY2O14599 106 aa4□□□□□ -1.77
COL4A5-204ENST00000477429 S100A1P23297 94 aa4□□□□□ -1.77
COL4A5-204ENST00000477429 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
COL4A5-204ENST00000477429 LOC105371267A0A1B0GV96 52 aa3.99□□□□□ -1.77
COL4A5-204ENST00000477429 PYY3Q5JQD4 70 aa3.99□□□□□ -1.77
COL4A5-204ENST00000477429 PDE6GP18545 87 aa3.98□□□□□ -1.77
COL4A5-204ENST00000477429 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
COL4A5-204ENST00000477429 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
COL4A5-204ENST00000477429 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
COL4A5-204ENST00000477429 MT4P47944 62 aa3.93□□□□□ -1.78
COL4A5-204ENST00000477429 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
COL4A5-204ENST00000477429 A8MUN3 132 aa3.9□□□□□ -1.79
COL4A5-204ENST00000477429 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
COL4A5-204ENST00000477429 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
COL4A5-204ENST00000477429 H0YAA0 97 aa3.88□□□□□ -1.79
COL4A5-204ENST00000477429 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
COL4A5-204ENST00000477429 K7EP34 96 aa3.87□□□□□ -1.79
COL4A5-204ENST00000477429 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
COL4A5-204ENST00000477429 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
COL4A5-204ENST00000477429 MT3P25713 68 aa3.85□□□□□ -1.79
COL4A5-204ENST00000477429 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
COL4A5-204ENST00000477429 V9GYY9 64 aa3.83□□□□□ -1.8
COL4A5-204ENST00000477429 P0C880 135 aa3.82□□□□□ -1.8
COL4A5-204ENST00000477429 H3BT86 120 aa3.79□□□□□ -1.8
COL4A5-204ENST00000477429 NDUFC1O43677 76 aa3.79□□□□□ -1.8
COL4A5-204ENST00000477429 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
COL4A5-204ENST00000477429 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
COL4A5-204ENST00000477429 M0R143 59 aa3.75□□□□□ -1.81
COL4A5-204ENST00000477429 R4GN34 69 aa3.75□□□□□ -1.81
COL4A5-204ENST00000477429 M0QZ58 72 aa3.74□□□□□ -1.81
COL4A5-204ENST00000477429 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
COL4A5-204ENST00000477429 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
COL4A5-204ENST00000477429 BATFQ16520 125 aa3.71□□□□□ -1.82
COL4A5-204ENST00000477429 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
COL4A5-204ENST00000477429 UBL5Q9BZL1 73 aa3.71□□□□□ -1.82
COL4A5-204ENST00000477429 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
COL4A5-204ENST00000477429 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
COL4A5-204ENST00000477429 TAX1BP3O14907 124 aa3.7□□□□□ -1.82
COL4A5-204ENST00000477429 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
COL4A5-204ENST00000477429 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
COL4A5-204ENST00000477429 TRAV22A0A0B4J277 110 aa3.69□□□□□ -1.82
COL4A5-204ENST00000477429 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
COL4A5-204ENST00000477429 MT1EP04732 61 aa3.67□□□□□ -1.82
COL4A5-204ENST00000477429 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
COL4A5-204ENST00000477429 ACYP1P07311 99 aa3.65□□□□□ -1.83
COL4A5-204ENST00000477429 PRO0461Q9UI25 63 aa3.65□□□□□ -1.83
COL4A5-204ENST00000477429 FAM240AA0A1B0GVK7 77 aa3.64□□□□□ -1.83
COL4A5-204ENST00000477429 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
COL4A5-204ENST00000477429 H0Y9P7 68 aa3.61□□□□□ -1.83
COL4A5-204ENST00000477429 PSPHP1O15172 72 aa3.61□□□□□ -1.83
COL4A5-204ENST00000477429 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
COL4A5-204ENST00000477429 A0A1B0GV90 55 aa3.58□□□□□ -1.84
COL4A5-204ENST00000477429 C20orf197Q8N268 126 aa3.57□□□□□ -1.84
COL4A5-204ENST00000477429 UQCRQO14949 82 aa3.56□□□□□ -1.84
COL4A5-204ENST00000477429 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
COL4A5-204ENST00000477429 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
COL4A5-204ENST00000477429 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
COL4A5-204ENST00000477429 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
COL4A5-204ENST00000477429 ATOX1O00244 68 aa3.52□□□□□ -1.85
COL4A5-204ENST00000477429 SMIM6P0DI80 62 aa3.52□□□□□ -1.85
COL4A5-204ENST00000477429 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
COL4A5-204ENST00000477429 MT1GP13640 62 aa3.51□□□□□ -1.85
COL4A5-204ENST00000477429 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
COL4A5-204ENST00000477429 MT1MQ8N339 61 aa3.51□□□□□ -1.85
COL4A5-204ENST00000477429 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
COL4A5-204ENST00000477429 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
COL4A5-204ENST00000477429 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
COL4A5-204ENST00000477429 ETDBQ3ZM63 59 aa3.46□□□□□ -1.86
COL4A5-204ENST00000477429 HIST1H4AP62805 103 aaKnown RBP3.45□□□□□ -1.86
COL4A5-204ENST00000477429 MT1LQ93083 61 aa3.45□□□□□ -1.86
COL4A5-204ENST00000477429 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms