RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 A8MUN3 132 aa8.58□□□□□ -1.04
SREBF1-211ENST00000476994 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
SREBF1-211ENST00000476994 H7BZZ5 65 aa8.55□□□□□ -1.04
SREBF1-211ENST00000476994 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
SREBF1-211ENST00000476994 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
SREBF1-211ENST00000476994 NDUFC1O43677 76 aa8.52□□□□□ -1.05
SREBF1-211ENST00000476994 S4R3F8 94 aa8.5□□□□□ -1.05
SREBF1-211ENST00000476994 LCA10Q71F78 164 aa8.49□□□□□ -1.05
SREBF1-211ENST00000476994 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
SREBF1-211ENST00000476994 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
SREBF1-211ENST00000476994 KRTAP9-7A8MTY7 169 aa8.46□□□□□ -1.06
SREBF1-211ENST00000476994 MT2AP02795 61 aa8.43□□□□□ -1.06
SREBF1-211ENST00000476994 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
SREBF1-211ENST00000476994 ACYP2P14621 99 aa8.4□□□□□ -1.06
SREBF1-211ENST00000476994 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
SREBF1-211ENST00000476994 USH2AO75445 5202 aa8.38□□□□□ -1.07
SREBF1-211ENST00000476994 MT1FP04733 61 aa8.35□□□□□ -1.07
SREBF1-211ENST00000476994 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
SREBF1-211ENST00000476994 PCP4P48539 62 aa8.31□□□□□ -1.08
SREBF1-211ENST00000476994 LCE2BO14633 110 aa8.29□□□□□ -1.08
SREBF1-211ENST00000476994 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
SREBF1-211ENST00000476994 KRTAP9-3Q9BYQ3 159 aa8.29□□□□□ -1.08
SREBF1-211ENST00000476994 TMEM258P61165 79 aa8.27□□□□□ -1.09
SREBF1-211ENST00000476994 COA5Q86WW8 74 aa8.27□□□□□ -1.09
SREBF1-211ENST00000476994 ATP5EP56381 51 aaPredicted RBP8.26□□□□□ -1.09
SREBF1-211ENST00000476994 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.09
SREBF1-211ENST00000476994 CHKB-CPT1BH3BT56 60 aa8.21□□□□□ -1.1
SREBF1-211ENST00000476994 H0YAA0 97 aa8.18□□□□□ -1.1
SREBF1-211ENST00000476994 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
SREBF1-211ENST00000476994 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
SREBF1-211ENST00000476994 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
SREBF1-211ENST00000476994 ADM2Q7Z4H4 148 aa8.07□□□□□ -1.12
SREBF1-211ENST00000476994 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
SREBF1-211ENST00000476994 P0C880 135 aa8.02□□□□□ -1.13
SREBF1-211ENST00000476994 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
SREBF1-211ENST00000476994 SYNE2Q8WXH0 6885 aaKnown RBP8□□□□□ -1.13
SREBF1-211ENST00000476994 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
SREBF1-211ENST00000476994 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
SREBF1-211ENST00000476994 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
SREBF1-211ENST00000476994 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
SREBF1-211ENST00000476994 RPS28P62857 69 aaKnown RBP7.82□□□□□ -1.16
SREBF1-211ENST00000476994 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
SREBF1-211ENST00000476994 SEC61GP60059 68 aa7.79□□□□□ -1.16
SREBF1-211ENST00000476994 A0A1B0GU69 56 aa7.78□□□□□ -1.16
SREBF1-211ENST00000476994 R4GN34 69 aa7.78□□□□□ -1.16
SREBF1-211ENST00000476994 M0QZ58 72 aa7.76□□□□□ -1.17
SREBF1-211ENST00000476994 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
SREBF1-211ENST00000476994 MT1BP07438 61 aa7.74□□□□□ -1.17
SREBF1-211ENST00000476994 SMIM26A0A096LP01 95 aa7.73□□□□□ -1.17
SREBF1-211ENST00000476994 A6NN06 94 aa7.71□□□□□ -1.18
SREBF1-211ENST00000476994 Q1T7F1 81 aa7.71□□□□□ -1.18
SREBF1-211ENST00000476994 A0A1B0GU33 70 aa7.69□□□□□ -1.18
SREBF1-211ENST00000476994 Q5VV11 94 aa7.69□□□□□ -1.18
SREBF1-211ENST00000476994 PRR15LQ9BU68 103 aa7.67□□□□□ -1.18
SREBF1-211ENST00000476994 V9GYY9 64 aa7.65□□□□□ -1.18
SREBF1-211ENST00000476994 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SREBF1-211ENST00000476994 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
SREBF1-211ENST00000476994 PSPHP1O15172 72 aa7.55□□□□□ -1.2
SREBF1-211ENST00000476994 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
SREBF1-211ENST00000476994 NEBP20929 6669 aa7.51□□□□□ -1.21
SREBF1-211ENST00000476994 A0A0D9SG42 100 aa7.47□□□□□ -1.21
SREBF1-211ENST00000476994 UQCR11O14957 56 aa7.47□□□□□ -1.21
SREBF1-211ENST00000476994 A8MU10 97 aa7.46□□□□□ -1.22
SREBF1-211ENST00000476994 PLAC4Q8WY50 150 aa7.46□□□□□ -1.22
SREBF1-211ENST00000476994 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
SREBF1-211ENST00000476994 KRTAP20-1Q3LI63 56 aa7.42□□□□□ -1.22
SREBF1-211ENST00000476994 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
SREBF1-211ENST00000476994 MT1XP80297 61 aa7.39□□□□□ -1.23
SREBF1-211ENST00000476994 KRTAP5-9P26371 169 aa7.38□□□□□ -1.23
SREBF1-211ENST00000476994 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
SREBF1-211ENST00000476994 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
SREBF1-211ENST00000476994 A6NED7 52 aa7.3□□□□□ -1.24
SREBF1-211ENST00000476994 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
SREBF1-211ENST00000476994 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
SREBF1-211ENST00000476994 KMT2DO14686 5537 aa7.23□□□□□ -1.25
SREBF1-211ENST00000476994 CAMK2N1Q7Z7J9 78 aa7.21□□□□□ -1.26
SREBF1-211ENST00000476994 KRTAP2-3P0C7H8 128 aa7.17□□□□□ -1.26
SREBF1-211ENST00000476994 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
SREBF1-211ENST00000476994 KRTAP2-4Q9BYR9 128 aa7.17□□□□□ -1.26
SREBF1-211ENST00000476994 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
SREBF1-211ENST00000476994 MDN1Q9NU22 5596 aa7.15□□□□□ -1.26
SREBF1-211ENST00000476994 SPRR2EP22531 72 aa7.11□□□□□ -1.27
SREBF1-211ENST00000476994 SPRR2BP35325 72 aa7.11□□□□□ -1.27
SREBF1-211ENST00000476994 SPRR2AP35326 72 aa7.11□□□□□ -1.27
SREBF1-211ENST00000476994 KRTAP8-1Q8IUC2 63 aa7.08□□□□□ -1.28
SREBF1-211ENST00000476994 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
SREBF1-211ENST00000476994 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SREBF1-211ENST00000476994 K7ERS5 55 aa7.03□□□□□ -1.28
SREBF1-211ENST00000476994 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
SREBF1-211ENST00000476994 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
SREBF1-211ENST00000476994 KRTAP2-2Q9BYT5 123 aa6.92□□□□□ -1.3
SREBF1-211ENST00000476994 KRTAP2-1Q9BYU5 128 aa6.92□□□□□ -1.3
SREBF1-211ENST00000476994 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
SREBF1-211ENST00000476994 SPRR2DP22532 72 aa6.89□□□□□ -1.31
SREBF1-211ENST00000476994 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SREBF1-211ENST00000476994 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
SREBF1-211ENST00000476994 TNP1P09430 55 aa6.83□□□□□ -1.32
SREBF1-211ENST00000476994 ROMO1P60602 79 aa6.75□□□□□ -1.33
SREBF1-211ENST00000476994 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
SREBF1-211ENST00000476994 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms