RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 H7BZZ5 65 aa7.85□□□□□ -1.15
PSMD4-211ENST00000476855 H1FX-AS1Q4G0G2 97 aa7.85□□□□□ -1.15
PSMD4-211ENST00000476855 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
PSMD4-211ENST00000476855 NDUFC1O43677 76 aa7.84□□□□□ -1.15
PSMD4-211ENST00000476855 SPANXA2-OT1Q8N9U9 137 aa7.83□□□□□ -1.16
PSMD4-211ENST00000476855 A8MUN3 132 aa7.81□□□□□ -1.16
PSMD4-211ENST00000476855 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
PSMD4-211ENST00000476855 PCP4P48539 62 aa7.75□□□□□ -1.17
PSMD4-211ENST00000476855 S4R3F8 94 aa7.71□□□□□ -1.18
PSMD4-211ENST00000476855 ACYP2P14621 99 aa7.69□□□□□ -1.18
PSMD4-211ENST00000476855 LCA10Q71F78 164 aa7.69□□□□□ -1.18
PSMD4-211ENST00000476855 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
PSMD4-211ENST00000476855 SSPOA2VEC9 5147 aa7.66□□□□□ -1.18
PSMD4-211ENST00000476855 USH2AO75445 5202 aa7.65□□□□□ -1.18
PSMD4-211ENST00000476855 TMEM258P61165 79 aa7.64□□□□□ -1.19
PSMD4-211ENST00000476855 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
PSMD4-211ENST00000476855 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
PSMD4-211ENST00000476855 COA5Q86WW8 74 aa7.57□□□□□ -1.2
PSMD4-211ENST00000476855 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
PSMD4-211ENST00000476855 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
PSMD4-211ENST00000476855 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
PSMD4-211ENST00000476855 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
PSMD4-211ENST00000476855 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
PSMD4-211ENST00000476855 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.21
PSMD4-211ENST00000476855 SPTSSBQ8NFR3 76 aa7.45□□□□□ -1.22
PSMD4-211ENST00000476855 MT2AP02795 61 aa7.44□□□□□ -1.22
PSMD4-211ENST00000476855 LCE2BO14633 110 aa7.42□□□□□ -1.22
PSMD4-211ENST00000476855 H0YAA0 97 aa7.4□□□□□ -1.22
PSMD4-211ENST00000476855 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
PSMD4-211ENST00000476855 MT1FP04733 61 aa7.39□□□□□ -1.23
PSMD4-211ENST00000476855 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
PSMD4-211ENST00000476855 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
PSMD4-211ENST00000476855 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
PSMD4-211ENST00000476855 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
PSMD4-211ENST00000476855 P0C880 135 aa7.27□□□□□ -1.25
PSMD4-211ENST00000476855 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
PSMD4-211ENST00000476855 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
PSMD4-211ENST00000476855 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
PSMD4-211ENST00000476855 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
PSMD4-211ENST00000476855 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
PSMD4-211ENST00000476855 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
PSMD4-211ENST00000476855 SEC61GP60059 68 aa7.15□□□□□ -1.26
PSMD4-211ENST00000476855 A0A1B0GU69 56 aa7.14□□□□□ -1.27
PSMD4-211ENST00000476855 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
PSMD4-211ENST00000476855 Q1T7F1 81 aa7.1□□□□□ -1.27
PSMD4-211ENST00000476855 R4GN34 69 aa7.07□□□□□ -1.28
PSMD4-211ENST00000476855 V9GYY9 64 aa7.07□□□□□ -1.28
PSMD4-211ENST00000476855 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
PSMD4-211ENST00000476855 M0QZ58 72 aa7.05□□□□□ -1.28
PSMD4-211ENST00000476855 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
PSMD4-211ENST00000476855 NEBP20929 6669 aa7.03□□□□□ -1.28
PSMD4-211ENST00000476855 A0A1B0GU33 70 aa7.03□□□□□ -1.28
PSMD4-211ENST00000476855 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
PSMD4-211ENST00000476855 PSPHP1O15172 72 aa6.96□□□□□ -1.3
PSMD4-211ENST00000476855 Q5VV11 94 aa6.96□□□□□ -1.3
PSMD4-211ENST00000476855 MT1BP07438 61 aa6.95□□□□□ -1.3
PSMD4-211ENST00000476855 KRTAP20-1Q3LI63 56 aa6.95□□□□□ -1.3
PSMD4-211ENST00000476855 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
PSMD4-211ENST00000476855 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
PSMD4-211ENST00000476855 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
PSMD4-211ENST00000476855 UQCR11O14957 56 aa6.87□□□□□ -1.31
PSMD4-211ENST00000476855 A6NN06 94 aa6.84□□□□□ -1.31
PSMD4-211ENST00000476855 A0A0D9SG42 100 aa6.81□□□□□ -1.32
PSMD4-211ENST00000476855 A8MU10 97 aa6.81□□□□□ -1.32
PSMD4-211ENST00000476855 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
PSMD4-211ENST00000476855 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
PSMD4-211ENST00000476855 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
PSMD4-211ENST00000476855 A6NED7 52 aa6.74□□□□□ -1.33
PSMD4-211ENST00000476855 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
PSMD4-211ENST00000476855 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
PSMD4-211ENST00000476855 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
PSMD4-211ENST00000476855 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
PSMD4-211ENST00000476855 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
PSMD4-211ENST00000476855 KMT2DO14686 5537 aa6.65□□□□□ -1.35
PSMD4-211ENST00000476855 MT1XP80297 61 aa6.64□□□□□ -1.35
PSMD4-211ENST00000476855 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
PSMD4-211ENST00000476855 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
PSMD4-211ENST00000476855 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
PSMD4-211ENST00000476855 CAMK2N1Q7Z7J9 78 aa6.56□□□□□ -1.36
PSMD4-211ENST00000476855 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
PSMD4-211ENST00000476855 K7ERS5 55 aa6.47□□□□□ -1.37
PSMD4-211ENST00000476855 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
PSMD4-211ENST00000476855 SPRR2EP22531 72 aa6.4□□□□□ -1.38
PSMD4-211ENST00000476855 SPRR2BP35325 72 aa6.4□□□□□ -1.38
PSMD4-211ENST00000476855 SPRR2AP35326 72 aa6.4□□□□□ -1.38
PSMD4-211ENST00000476855 C10orf95Q9H7T3 257 aa6.4□□□□□ -1.38
PSMD4-211ENST00000476855 KRTAP2-2Q9BYT5 123 aa6.38□□□□□ -1.39
PSMD4-211ENST00000476855 KRTAP2-1Q9BYU5 128 aa6.38□□□□□ -1.39
PSMD4-211ENST00000476855 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
PSMD4-211ENST00000476855 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
PSMD4-211ENST00000476855 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
PSMD4-211ENST00000476855 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
PSMD4-211ENST00000476855 TNP1P09430 55 aa6.22□□□□□ -1.41
PSMD4-211ENST00000476855 SPRR2DP22532 72 aa6.2□□□□□ -1.42
PSMD4-211ENST00000476855 ROMO1P60602 79 aa6.19□□□□□ -1.42
PSMD4-211ENST00000476855 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
PSMD4-211ENST00000476855 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
PSMD4-211ENST00000476855 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
PSMD4-211ENST00000476855 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
PSMD4-211ENST00000476855 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms