RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
CCM2-207ENST00000475551 KIAA1109Q2LD37 5005 aa9.32□□□□□ -0.92
CCM2-207ENST00000475551 FAT1Q14517 4588 aa9.31□□□□□ -0.92
CCM2-207ENST00000475551 RYR1P21817 5038 aa9.31□□□□□ -0.92
CCM2-207ENST00000475551 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
CCM2-207ENST00000475551 KRTAP17-1Q9BYP8 105 aa9.27□□□□□ -0.93
CCM2-207ENST00000475551 J3QL48 77 aa9.26□□□□□ -0.93
CCM2-207ENST00000475551 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
CCM2-207ENST00000475551 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
CCM2-207ENST00000475551 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
CCM2-207ENST00000475551 Q5VSD8 79 aa9.22□□□□□ -0.93
CCM2-207ENST00000475551 PKHD1L1Q86WI1 4243 aa9.21□□□□□ -0.93
CCM2-207ENST00000475551 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CCM2-207ENST00000475551 KRTAP13-4Q3LI77 160 aa9.18□□□□□ -0.94
CCM2-207ENST00000475551 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
CCM2-207ENST00000475551 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
CCM2-207ENST00000475551 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
CCM2-207ENST00000475551 A0A0D9SG42 100 aa9.12□□□□□ -0.95
CCM2-207ENST00000475551 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
CCM2-207ENST00000475551 HERC2O95714 4834 aa9.06□□□□□ -0.96
CCM2-207ENST00000475551 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
CCM2-207ENST00000475551 KRTAP15-1Q3LI76 137 aa9.01□□□□□ -0.97
CCM2-207ENST00000475551 S4R3F8 94 aa9□□□□□ -0.97
CCM2-207ENST00000475551 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
CCM2-207ENST00000475551 ABCA13Q86UQ4 5058 aa8.94□□□□□ -0.98
CCM2-207ENST00000475551 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
CCM2-207ENST00000475551 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
CCM2-207ENST00000475551 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
CCM2-207ENST00000475551 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
CCM2-207ENST00000475551 NDUFAF8A1L188 74 aa8.9□□□□□ -0.99
CCM2-207ENST00000475551 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
CCM2-207ENST00000475551 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
CCM2-207ENST00000475551 TNXBP22105 4242 aa8.83□□□□□ -1
CCM2-207ENST00000475551 XP32Q5T750 250 aa8.81□□□□□ -1
CCM2-207ENST00000475551 MT1HL1P0DM35 61 aa8.81□□□□□ -1
CCM2-207ENST00000475551 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
CCM2-207ENST00000475551 M0QZ58 72 aa8.72□□□□□ -1.01
CCM2-207ENST00000475551 HERC1Q15751 4861 aa8.5□□□□□ -1.05
CCM2-207ENST00000475551 PLAC4Q8WY50 150 aa8.4□□□□□ -1.07
CCM2-207ENST00000475551 R4GN34 69 aa8.37□□□□□ -1.07
CCM2-207ENST00000475551 LPAP08519 4548 aa8.36□□□□□ -1.07
CCM2-207ENST00000475551 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
CCM2-207ENST00000475551 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
CCM2-207ENST00000475551 LRP2P98164 4655 aa8.22□□□□□ -1.09
CCM2-207ENST00000475551 LUZP6Q538Z0 58 aa8.21□□□□□ -1.09
CCM2-207ENST00000475551 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
CCM2-207ENST00000475551 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
CCM2-207ENST00000475551 UBR4Q5T4S7 5183 aa7.99□□□□□ -1.13
CCM2-207ENST00000475551 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
CCM2-207ENST00000475551 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
CCM2-207ENST00000475551 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
CCM2-207ENST00000475551 MUC2Q02817 5179 aa7.9□□□□□ -1.14
CCM2-207ENST00000475551 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
CCM2-207ENST00000475551 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.16
CCM2-207ENST00000475551 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
CCM2-207ENST00000475551 SPRR5A0A1B0GTR4 108 aa7.8□□□□□ -1.16
CCM2-207ENST00000475551 TNP1P09430 55 aa7.78□□□□□ -1.16
CCM2-207ENST00000475551 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
CCM2-207ENST00000475551 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
CCM2-207ENST00000475551 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.21
CCM2-207ENST00000475551 MT1HP80294 61 aa7.44□□□□□ -1.22
CCM2-207ENST00000475551 M0R2T5 61 aa7.36□□□□□ -1.23
CCM2-207ENST00000475551 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.24
CCM2-207ENST00000475551 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.24
CCM2-207ENST00000475551 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
CCM2-207ENST00000475551 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
CCM2-207ENST00000475551 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
CCM2-207ENST00000475551 INE1O15225 51 aa7.21□□□□□ -1.25
CCM2-207ENST00000475551 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
CCM2-207ENST00000475551 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
CCM2-207ENST00000475551 MT2AP02795 61 aa7.08□□□□□ -1.28
CCM2-207ENST00000475551 MT1FP04733 61 aa7.04□□□□□ -1.28
CCM2-207ENST00000475551 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
CCM2-207ENST00000475551 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
CCM2-207ENST00000475551 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
CCM2-207ENST00000475551 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
CCM2-207ENST00000475551 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
CCM2-207ENST00000475551 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
CCM2-207ENST00000475551 MT1XP80297 61 aa6.87□□□□□ -1.31
CCM2-207ENST00000475551 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
CCM2-207ENST00000475551 MT1BP07438 61 aa6.82□□□□□ -1.32
CCM2-207ENST00000475551 LCE2BO14633 110 aa6.75□□□□□ -1.33
CCM2-207ENST00000475551 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
CCM2-207ENST00000475551 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
CCM2-207ENST00000475551 USH2AO75445 5202 aa6.63□□□□□ -1.35
CCM2-207ENST00000475551 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.36
CCM2-207ENST00000475551 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
CCM2-207ENST00000475551 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
CCM2-207ENST00000475551 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
CCM2-207ENST00000475551 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
CCM2-207ENST00000475551 KRTAP19-6Q3LI70 58 aa6.37□□□□□ -1.39
CCM2-207ENST00000475551 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
CCM2-207ENST00000475551 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CCM2-207ENST00000475551 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CCM2-207ENST00000475551 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CCM2-207ENST00000475551 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
CCM2-207ENST00000475551 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
CCM2-207ENST00000475551 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
CCM2-207ENST00000475551 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
CCM2-207ENST00000475551 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms