RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 MP68P56378 58 aa10.93□□□□□ -0.66
CPNE1-223ENST00000475146 KRTAP9-7A8MTY7 169 aa10.92□□□□□ -0.66
CPNE1-223ENST00000475146 KLKP1Q107X0 134 aa10.88□□□□□ -0.67
CPNE1-223ENST00000475146 A8MUN3 132 aa10.85□□□□□ -0.67
CPNE1-223ENST00000475146 NDUFC1O43677 76 aa10.84□□□□□ -0.67
CPNE1-223ENST00000475146 SCGB1A1P11684 91 aa10.82□□□□□ -0.68
CPNE1-223ENST00000475146 SPRR2GQ9BYE4 73 aa10.81□□□□□ -0.68
CPNE1-223ENST00000475146 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
CPNE1-223ENST00000475146 Q5VV11 94 aa10.77□□□□□ -0.69
CPNE1-223ENST00000475146 H3BPC8 53 aa10.76□□□□□ -0.69
CPNE1-223ENST00000475146 MT1BP07438 61 aa10.73□□□□□ -0.69
CPNE1-223ENST00000475146 KRTAP19-8Q3LI54 63 aa10.72□□□□□ -0.69
CPNE1-223ENST00000475146 MACF1Q9UPN3 7388 aaKnown RBP10.7□□□□□ -0.7
CPNE1-223ENST00000475146 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
CPNE1-223ENST00000475146 H0YAA0 97 aa10.67□□□□□ -0.7
CPNE1-223ENST00000475146 K7ERU9 68 aa10.65□□□□□ -0.7
CPNE1-223ENST00000475146 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
CPNE1-223ENST00000475146 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
CPNE1-223ENST00000475146 A6NN06 94 aa10.6□□□□□ -0.71
CPNE1-223ENST00000475146 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
CPNE1-223ENST00000475146 SMIM20Q8N5G0 67 aa10.51□□□□□ -0.73
CPNE1-223ENST00000475146 SYNE2Q8WXH0 6885 aaKnown RBP10.51□□□□□ -0.73
CPNE1-223ENST00000475146 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
CPNE1-223ENST00000475146 KRTAP10-5P60370 271 aa10.46□□□□□ -0.73
CPNE1-223ENST00000475146 KRTAP6-3Q3LI67 103 aa10.39□□□□□ -0.75
CPNE1-223ENST00000475146 C20orf197Q8N268 126 aa10.38□□□□□ -0.75
CPNE1-223ENST00000475146 P0C880 135 aa10.36□□□□□ -0.75
CPNE1-223ENST00000475146 ACYP2P14621 99 aa10.36□□□□□ -0.75
CPNE1-223ENST00000475146 R4GN34 69 aa10.33□□□□□ -0.76
CPNE1-223ENST00000475146 SNURFQ9Y675 71 aa10.3□□□□□ -0.76
CPNE1-223ENST00000475146 M0QZ58 72 aa10.27□□□□□ -0.77
CPNE1-223ENST00000475146 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
CPNE1-223ENST00000475146 SPTSSBQ8NFR3 76 aa10.23□□□□□ -0.77
CPNE1-223ENST00000475146 CHKB-CPT1BH3BT56 60 aa10.22□□□□□ -0.77
CPNE1-223ENST00000475146 PLAC4Q8WY50 150 aa10.22□□□□□ -0.77
CPNE1-223ENST00000475146 SERP2Q8N6R1 65 aa10.18□□□□□ -0.78
CPNE1-223ENST00000475146 PRO2289Q9P1D8 64 aa10.15□□□□□ -0.78
CPNE1-223ENST00000475146 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
CPNE1-223ENST00000475146 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
CPNE1-223ENST00000475146 MT1XP80297 61 aa10.09□□□□□ -0.79
CPNE1-223ENST00000475146 KRTAP5-9P26371 169 aa9.94□□□□□ -0.82
CPNE1-223ENST00000475146 NEBP20929 6669 aa9.9□□□□□ -0.83
CPNE1-223ENST00000475146 COX7CP15954 63 aa9.89□□□□□ -0.83
CPNE1-223ENST00000475146 COA5Q86WW8 74 aa9.86□□□□□ -0.83
CPNE1-223ENST00000475146 MUC12Q9UKN1 5478 aa9.84□□□□□ -0.83
CPNE1-223ENST00000475146 KRTAP12-2P59991 146 aa9.81□□□□□ -0.84
CPNE1-223ENST00000475146 KRTAP8-1Q8IUC2 63 aa9.74□□□□□ -0.85
CPNE1-223ENST00000475146 SPRR2FQ96RM1 72 aa9.73□□□□□ -0.85
CPNE1-223ENST00000475146 KMT2DO14686 5537 aa9.73□□□□□ -0.85
CPNE1-223ENST00000475146 H7BZZ5 65 aa9.72□□□□□ -0.85
CPNE1-223ENST00000475146 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
CPNE1-223ENST00000475146 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
CPNE1-223ENST00000475146 SEC61GP60059 68 aa9.67□□□□□ -0.86
CPNE1-223ENST00000475146 KRTAP10-7P60409 375 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-223ENST00000475146 SERP1Q9Y6X1 66 aa9.64□□□□□ -0.87
CPNE1-223ENST00000475146 KRTAP4-8A0A0G2JLE6 195 aa9.62□□□□□ -0.87
CPNE1-223ENST00000475146 ANAPC13Q9BS18 74 aa9.62□□□□□ -0.87
CPNE1-223ENST00000475146 KRTAP4-8Q9BYQ9 185 aa9.62□□□□□ -0.87
CPNE1-223ENST00000475146 KRTAP20-1Q3LI63 56 aa9.6□□□□□ -0.87
CPNE1-223ENST00000475146 SPRR2EP22531 72 aa9.57□□□□□ -0.88
CPNE1-223ENST00000475146 SPRR2BP35325 72 aa9.57□□□□□ -0.88
CPNE1-223ENST00000475146 SPRR2AP35326 72 aa9.57□□□□□ -0.88
CPNE1-223ENST00000475146 KRTAP10-12P60413 245 aa9.57□□□□□ -0.88
CPNE1-223ENST00000475146 MDN1Q9NU22 5596 aa9.57□□□□□ -0.88
CPNE1-223ENST00000475146 CAMK2N1Q7Z7J9 78 aa9.54□□□□□ -0.88
CPNE1-223ENST00000475146 A0A0D9SG42 100 aa9.49□□□□□ -0.89
CPNE1-223ENST00000475146 A0A1B0GU33 70 aa9.46□□□□□ -0.9
CPNE1-223ENST00000475146 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.9
CPNE1-223ENST00000475146 LCE1AQ5T7P2 110 aa9.42□□□□□ -0.9
CPNE1-223ENST00000475146 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
CPNE1-223ENST00000475146 A0A1B0GU69 56 aa9.37□□□□□ -0.91
CPNE1-223ENST00000475146 KRTAP2-3P0C7H8 128 aa9.35□□□□□ -0.91
CPNE1-223ENST00000475146 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
CPNE1-223ENST00000475146 KRTAP2-4Q9BYR9 128 aa9.35□□□□□ -0.91
CPNE1-223ENST00000475146 ATP5EP56381 51 aaPredicted RBP9.27□□□□□ -0.93
CPNE1-223ENST00000475146 SPRR2DP22532 72 aa9.25□□□□□ -0.93
CPNE1-223ENST00000475146 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
CPNE1-223ENST00000475146 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.94
CPNE1-223ENST00000475146 A8MU10 97 aa9.14□□□□□ -0.95
CPNE1-223ENST00000475146 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
CPNE1-223ENST00000475146 TMEM258P61165 79 aa9.06□□□□□ -0.96
CPNE1-223ENST00000475146 KRTAP2-2Q9BYT5 123 aa9.06□□□□□ -0.96
CPNE1-223ENST00000475146 KRTAP2-1Q9BYU5 128 aa9.06□□□□□ -0.96
CPNE1-223ENST00000475146 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
CPNE1-223ENST00000475146 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
CPNE1-223ENST00000475146 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
CPNE1-223ENST00000475146 MT1EP04732 61 aa8.94□□□□□ -0.98
CPNE1-223ENST00000475146 KRTAP19-5Q3LI72 72 aa8.84□□□□□ -0.99
CPNE1-223ENST00000475146 KRTAP19-3Q7Z4W3 81 aa8.84□□□□□ -0.99
CPNE1-223ENST00000475146 LCE5AQ5TCM9 118 aa8.83□□□□□ -1
CPNE1-223ENST00000475146 C10orf95Q9H7T3 257 aa8.83□□□□□ -1
CPNE1-223ENST00000475146 TNP1P09430 55 aa8.81□□□□□ -1
CPNE1-223ENST00000475146 UQCR11O14957 56 aa8.8□□□□□ -1
CPNE1-223ENST00000475146 LCE3AQ5TA76 89 aa8.71□□□□□ -1.02
CPNE1-223ENST00000475146 MT1GP13640 62 aa8.63□□□□□ -1.03
CPNE1-223ENST00000475146 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
CPNE1-223ENST00000475146 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
CPNE1-223ENST00000475146 DSTQ03001 7570 aaKnown RBP8.57□□□□□ -1.04
CPNE1-223ENST00000475146 MT1LQ93083 61 aa8.56□□□□□ -1.04
CPNE1-223ENST00000475146 V9GYY9 64 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms