RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SPRR2EP22531 72 aa4.8□□□□□ -1.64
ACTB-209ENST00000473257 SPRR2BP35325 72 aa4.8□□□□□ -1.64
ACTB-209ENST00000473257 SPRR2AP35326 72 aa4.8□□□□□ -1.64
ACTB-209ENST00000473257 K7EP34 96 aa4.75□□□□□ -1.65
ACTB-209ENST00000473257 UBL5Q9BZL1 73 aa4.74□□□□□ -1.65
ACTB-209ENST00000473257 F8W1H4 67 aa4.73□□□□□ -1.65
ACTB-209ENST00000473257 MT1XP80297 61 aa4.73□□□□□ -1.65
ACTB-209ENST00000473257 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
ACTB-209ENST00000473257 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
ACTB-209ENST00000473257 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
ACTB-209ENST00000473257 K7ERU9 68 aa4.72□□□□□ -1.65
ACTB-209ENST00000473257 J3QR89 54 aa4.7□□□□□ -1.66
ACTB-209ENST00000473257 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
ACTB-209ENST00000473257 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
ACTB-209ENST00000473257 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
ACTB-209ENST00000473257 PRO0461Q9UI25 63 aa4.69□□□□□ -1.66
ACTB-209ENST00000473257 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
ACTB-209ENST00000473257 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
ACTB-209ENST00000473257 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
ACTB-209ENST00000473257 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
ACTB-209ENST00000473257 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
ACTB-209ENST00000473257 A8MUN3 132 aa4.64□□□□□ -1.67
ACTB-209ENST00000473257 NDUFC1O43677 76 aa4.64□□□□□ -1.67
ACTB-209ENST00000473257 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
ACTB-209ENST00000473257 SPRR2DP22532 72 aa4.63□□□□□ -1.67
ACTB-209ENST00000473257 TRAV22A0A0B4J277 110 aa4.62□□□□□ -1.67
ACTB-209ENST00000473257 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
ACTB-209ENST00000473257 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
ACTB-209ENST00000473257 H0YAA0 97 aa4.61□□□□□ -1.67
ACTB-209ENST00000473257 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
ACTB-209ENST00000473257 P0C880 135 aa4.57□□□□□ -1.68
ACTB-209ENST00000473257 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
ACTB-209ENST00000473257 H0Y9P7 68 aa4.56□□□□□ -1.68
ACTB-209ENST00000473257 ETDBQ3ZM63 59 aa4.56□□□□□ -1.68
ACTB-209ENST00000473257 SCGB1A1P11684 91 aa4.55□□□□□ -1.68
ACTB-209ENST00000473257 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
ACTB-209ENST00000473257 ACYP1P07311 99 aa4.54□□□□□ -1.68
ACTB-209ENST00000473257 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
ACTB-209ENST00000473257 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
ACTB-209ENST00000473257 R4GN34 69 aa4.52□□□□□ -1.69
ACTB-209ENST00000473257 M0QZ58 72 aa4.51□□□□□ -1.69
ACTB-209ENST00000473257 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
ACTB-209ENST00000473257 UQCRQO14949 82 aa4.5□□□□□ -1.69
ACTB-209ENST00000473257 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
ACTB-209ENST00000473257 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
ACTB-209ENST00000473257 ATOX1O00244 68 aa4.46□□□□□ -1.7
ACTB-209ENST00000473257 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
ACTB-209ENST00000473257 PCP4P48539 62 aa4.45□□□□□ -1.7
ACTB-209ENST00000473257 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
ACTB-209ENST00000473257 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
ACTB-209ENST00000473257 LINC00643Q86TS7 51 aa4.41□□□□□ -1.7
ACTB-209ENST00000473257 ATP5EP2Q5VTU8 51 aa4.4□□□□□ -1.71
ACTB-209ENST00000473257 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
ACTB-209ENST00000473257 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
ACTB-209ENST00000473257 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
ACTB-209ENST00000473257 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
ACTB-209ENST00000473257 MP68P56378 58 aa4.33□□□□□ -1.72
ACTB-209ENST00000473257 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
ACTB-209ENST00000473257 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
ACTB-209ENST00000473257 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
ACTB-209ENST00000473257 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
ACTB-209ENST00000473257 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
ACTB-209ENST00000473257 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
ACTB-209ENST00000473257 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.73
ACTB-209ENST00000473257 MT1EP04732 61 aa4.2□□□□□ -1.74
ACTB-209ENST00000473257 COX7CP15954 63 aa4.2□□□□□ -1.74
ACTB-209ENST00000473257 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
ACTB-209ENST00000473257 H3BPC8 53 aa4.19□□□□□ -1.74
ACTB-209ENST00000473257 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
ACTB-209ENST00000473257 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
ACTB-209ENST00000473257 TRAV7A0A075B6U4 112 aa4.17□□□□□ -1.74
ACTB-209ENST00000473257 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
ACTB-209ENST00000473257 ACYP2P14621 99 aa4.14□□□□□ -1.75
ACTB-209ENST00000473257 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
ACTB-209ENST00000473257 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
ACTB-209ENST00000473257 MT4P47944 62 aa4.12□□□□□ -1.75
ACTB-209ENST00000473257 TMEM258P61165 79 aa4.12□□□□□ -1.75
ACTB-209ENST00000473257 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
ACTB-209ENST00000473257 CYSTM1Q9H1C7 97 aa4.1□□□□□ -1.75
ACTB-209ENST00000473257 CHKB-CPT1BH3BT56 60 aa4.09□□□□□ -1.75
ACTB-209ENST00000473257 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
ACTB-209ENST00000473257 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
ACTB-209ENST00000473257 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
ACTB-209ENST00000473257 A0A0D9SG42 100 aa4.04□□□□□ -1.76
ACTB-209ENST00000473257 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
ACTB-209ENST00000473257 MT1GP13640 62 aa4.02□□□□□ -1.77
ACTB-209ENST00000473257 H7BZZ5 65 aa4.01□□□□□ -1.77
ACTB-209ENST00000473257 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
ACTB-209ENST00000473257 MT1MQ8N339 61 aa4.01□□□□□ -1.77
ACTB-209ENST00000473257 SNURFQ9Y675 71 aa4□□□□□ -1.77
ACTB-209ENST00000473257 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
ACTB-209ENST00000473257 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
ACTB-209ENST00000473257 MT1LQ93083 61 aa3.97□□□□□ -1.77
ACTB-209ENST00000473257 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
ACTB-209ENST00000473257 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
ACTB-209ENST00000473257 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
ACTB-209ENST00000473257 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
ACTB-209ENST00000473257 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
ACTB-209ENST00000473257 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
ACTB-209ENST00000473257 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms