RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
HLA-C-206ENST00000470363 CYP4F30PQ9H0H9 118 aa5.86□□□□□ -1.47
HLA-C-206ENST00000470363 C7orf65Q6ZTY9 151 aa5.85□□□□□ -1.47
HLA-C-206ENST00000470363 LOC101927531A0A1B0GV80 90 aa5.84□□□□□ -1.47
HLA-C-206ENST00000470363 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
HLA-C-206ENST00000470363 H3BPC8 53 aa5.83□□□□□ -1.48
HLA-C-206ENST00000470363 CCDC179H3BU77 68 aa5.83□□□□□ -1.48
HLA-C-206ENST00000470363 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
HLA-C-206ENST00000470363 USH2AO75445 5202 aa5.82□□□□□ -1.48
HLA-C-206ENST00000470363 HRES1P13985 223 aa5.8□□□□□ -1.48
HLA-C-206ENST00000470363 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
HLA-C-206ENST00000470363 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
HLA-C-206ENST00000470363 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
HLA-C-206ENST00000470363 PCP4P48539 62 aa5.76□□□□□ -1.49
HLA-C-206ENST00000470363 MT2AP02795 61 aa5.75□□□□□ -1.49
HLA-C-206ENST00000470363 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
HLA-C-206ENST00000470363 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
HLA-C-206ENST00000470363 MT1FP04733 61 aa5.71□□□□□ -1.5
HLA-C-206ENST00000470363 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
HLA-C-206ENST00000470363 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
HLA-C-206ENST00000470363 H7BZZ5 65 aa5.7□□□□□ -1.5
HLA-C-206ENST00000470363 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
HLA-C-206ENST00000470363 FAM236DA0A1B0GTK5 79 aa5.69□□□□□ -1.5
HLA-C-206ENST00000470363 FAM236CP0DP71 79 aa5.69□□□□□ -1.5
HLA-C-206ENST00000470363 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
HLA-C-206ENST00000470363 NDUFC1O43677 76 aa5.67□□□□□ -1.5
HLA-C-206ENST00000470363 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
HLA-C-206ENST00000470363 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
HLA-C-206ENST00000470363 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
HLA-C-206ENST00000470363 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
HLA-C-206ENST00000470363 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
HLA-C-206ENST00000470363 A8MUN3 132 aa5.57□□□□□ -1.52
HLA-C-206ENST00000470363 ACYP2P14621 99 aa5.56□□□□□ -1.52
HLA-C-206ENST00000470363 TMEM258P61165 79 aa5.55□□□□□ -1.52
HLA-C-206ENST00000470363 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
HLA-C-206ENST00000470363 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
HLA-C-206ENST00000470363 S4R3F8 94 aa5.53□□□□□ -1.52
HLA-C-206ENST00000470363 LCA10Q71F78 164 aa5.52□□□□□ -1.53
HLA-C-206ENST00000470363 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
HLA-C-206ENST00000470363 COA5Q86WW8 74 aa5.5□□□□□ -1.53
HLA-C-206ENST00000470363 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HLA-C-206ENST00000470363 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
HLA-C-206ENST00000470363 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
HLA-C-206ENST00000470363 CSAG1Q6PB30 78 aa5.42□□□□□ -1.54
HLA-C-206ENST00000470363 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
HLA-C-206ENST00000470363 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
HLA-C-206ENST00000470363 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
HLA-C-206ENST00000470363 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
HLA-C-206ENST00000470363 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
HLA-C-206ENST00000470363 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
HLA-C-206ENST00000470363 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
HLA-C-206ENST00000470363 H0YAA0 97 aa5.24□□□□□ -1.57
HLA-C-206ENST00000470363 P0C880 135 aa5.24□□□□□ -1.57
HLA-C-206ENST00000470363 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
HLA-C-206ENST00000470363 MT1BP07438 61 aa5.21□□□□□ -1.58
HLA-C-206ENST00000470363 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
HLA-C-206ENST00000470363 A0A1B0GU69 56 aa5.19□□□□□ -1.58
HLA-C-206ENST00000470363 SEC61GP60059 68 aa5.19□□□□□ -1.58
HLA-C-206ENST00000470363 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
HLA-C-206ENST00000470363 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
HLA-C-206ENST00000470363 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
HLA-C-206ENST00000470363 Q1T7F1 81 aa5.17□□□□□ -1.58
HLA-C-206ENST00000470363 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
HLA-C-206ENST00000470363 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.58
HLA-C-206ENST00000470363 V9GYY9 64 aa5.14□□□□□ -1.59
HLA-C-206ENST00000470363 A6NN06 94 aa5.13□□□□□ -1.59
HLA-C-206ENST00000470363 PSPHP1O15172 72 aa5.13□□□□□ -1.59
HLA-C-206ENST00000470363 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
HLA-C-206ENST00000470363 Q5VV11 94 aa5.11□□□□□ -1.59
HLA-C-206ENST00000470363 A0A1B0GU33 70 aa5.1□□□□□ -1.59
HLA-C-206ENST00000470363 M0QZ58 72 aa5.09□□□□□ -1.59
HLA-C-206ENST00000470363 NEBP20929 6669 aa5.09□□□□□ -1.6
HLA-C-206ENST00000470363 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
HLA-C-206ENST00000470363 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
HLA-C-206ENST00000470363 CRIPTQ9P021 101 aa5.07□□□□□ -1.6
HLA-C-206ENST00000470363 R4GN34 69 aa5.07□□□□□ -1.6
HLA-C-206ENST00000470363 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
HLA-C-206ENST00000470363 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
HLA-C-206ENST00000470363 KMT2DO14686 5537 aa5.03□□□□□ -1.6
HLA-C-206ENST00000470363 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
HLA-C-206ENST00000470363 MDN1Q9NU22 5596 aa5□□□□□ -1.61
HLA-C-206ENST00000470363 A0A0D9SG42 100 aa4.98□□□□□ -1.61
HLA-C-206ENST00000470363 UQCR11O14957 56 aa4.98□□□□□ -1.61
HLA-C-206ENST00000470363 A8MU10 97 aa4.97□□□□□ -1.61
HLA-C-206ENST00000470363 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
HLA-C-206ENST00000470363 A6NED7 52 aa4.95□□□□□ -1.62
HLA-C-206ENST00000470363 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
HLA-C-206ENST00000470363 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
HLA-C-206ENST00000470363 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
HLA-C-206ENST00000470363 MT1XP80297 61 aa4.85□□□□□ -1.63
HLA-C-206ENST00000470363 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
HLA-C-206ENST00000470363 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
HLA-C-206ENST00000470363 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
HLA-C-206ENST00000470363 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
HLA-C-206ENST00000470363 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
HLA-C-206ENST00000470363 CDC42SE1Q9NRR8 79 aa4.81□□□□□ -1.64
HLA-C-206ENST00000470363 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
HLA-C-206ENST00000470363 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
HLA-C-206ENST00000470363 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
HLA-C-206ENST00000470363 SPRR2EP22531 72 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms