RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 ACYP1P07311 99 aa13.69□□□□□ -0.22
HMG20B-209ENST00000470356 IMUPQ9GZP8 106 aa13.69□□□□□ -0.22
HMG20B-209ENST00000470356 MUC12Q9UKN1 5478 aa13.67□□□□□ -0.22
HMG20B-209ENST00000470356 UQCRQO14949 82 aa13.63□□□□□ -0.23
HMG20B-209ENST00000470356 ATP5EP2Q5VTU8 51 aa13.63□□□□□ -0.23
HMG20B-209ENST00000470356 PCP4L1A6NKN8 68 aa13.62□□□□□ -0.23
HMG20B-209ENST00000470356 ATOX1O00244 68 aa13.6□□□□□ -0.23
HMG20B-209ENST00000470356 NDUFC1O43677 76 aa13.6□□□□□ -0.23
HMG20B-209ENST00000470356 FAM240AA0A1B0GVK7 77 aa13.59□□□□□ -0.23
HMG20B-209ENST00000470356 H0Y9P7 68 aa13.58□□□□□ -0.24
HMG20B-209ENST00000470356 H0YAA0 97 aa13.58□□□□□ -0.24
HMG20B-209ENST00000470356 HIST1H4AP62805 103 aaKnown RBP13.58□□□□□ -0.24
HMG20B-209ENST00000470356 KRTAP5-9P26371 169 aa13.54□□□□□ -0.24
HMG20B-209ENST00000470356 A8MUN3 132 aa13.46□□□□□ -0.25
HMG20B-209ENST00000470356 KMT2DO14686 5537 aa13.41□□□□□ -0.26
HMG20B-209ENST00000470356 ADM2Q7Z4H4 148 aa13.39□□□□□ -0.27
HMG20B-209ENST00000470356 KRTAP20-1Q3LI63 56 aa13.35□□□□□ -0.27
HMG20B-209ENST00000470356 LINC00208Q96KT6 92 aa13.35□□□□□ -0.27
HMG20B-209ENST00000470356 LINC00643Q86TS7 51 aa13.33□□□□□ -0.28
HMG20B-209ENST00000470356 MDN1Q9NU22 5596 aa13.29□□□□□ -0.28
HMG20B-209ENST00000470356 MP68P56378 58 aa13.23□□□□□ -0.29
HMG20B-209ENST00000470356 OCR1Q9BZK8 76 aa13.23□□□□□ -0.29
HMG20B-209ENST00000470356 PRO2289Q9P1D8 64 aa13.23□□□□□ -0.29
HMG20B-209ENST00000470356 MT1XP80297 61 aa13.17□□□□□ -0.3
HMG20B-209ENST00000470356 PLAC4Q8WY50 150 aa13.15□□□□□ -0.3
HMG20B-209ENST00000470356 R4GN34 69 aa13.08□□□□□ -0.32
HMG20B-209ENST00000470356 P0C880 135 aa13.05□□□□□ -0.32
HMG20B-209ENST00000470356 C20orf197Q8N268 126 aa13.05□□□□□ -0.32
HMG20B-209ENST00000470356 SPRR2FQ96RM1 72 aa13.05□□□□□ -0.32
HMG20B-209ENST00000470356 H3BPC8 53 aa13.01□□□□□ -0.33
HMG20B-209ENST00000470356 DMAC1Q96GE9 116 aa12.98□□□□□ -0.33
HMG20B-209ENST00000470356 KRTAP2-3P0C7H8 128 aa12.96□□□□□ -0.33
HMG20B-209ENST00000470356 KRTAP2-4Q9BYR9 128 aa12.96□□□□□ -0.33
HMG20B-209ENST00000470356 M0QZ58 72 aa12.95□□□□□ -0.34
HMG20B-209ENST00000470356 KRTAP12-2P59991 146 aa12.92□□□□□ -0.34
HMG20B-209ENST00000470356 SPRR2EP22531 72 aa12.91□□□□□ -0.34
HMG20B-209ENST00000470356 SPRR2BP35325 72 aa12.91□□□□□ -0.34
HMG20B-209ENST00000470356 SPRR2AP35326 72 aa12.91□□□□□ -0.34
HMG20B-209ENST00000470356 KRTAP8-1Q8IUC2 63 aa12.91□□□□□ -0.34
HMG20B-209ENST00000470356 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
HMG20B-209ENST00000470356 A0A1B0GV90 55 aa12.85□□□□□ -0.35
HMG20B-209ENST00000470356 SCGB1A1P11684 91 aa12.82□□□□□ -0.36
HMG20B-209ENST00000470356 LINC01554Q52M75 96 aa12.78□□□□□ -0.36
HMG20B-209ENST00000470356 J3QR89 54 aa12.76□□□□□ -0.37
HMG20B-209ENST00000470356 LCE1AQ5T7P2 110 aa12.73□□□□□ -0.37
HMG20B-209ENST00000470356 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
HMG20B-209ENST00000470356 KRTAP4-8A0A0G2JLE6 195 aa12.68□□□□□ -0.38
HMG20B-209ENST00000470356 KRTAP4-8Q9BYQ9 185 aa12.68□□□□□ -0.38
HMG20B-209ENST00000470356 ACYP2P14621 99 aa12.61□□□□□ -0.39
HMG20B-209ENST00000470356 KRTAP10-7P60409 375 aaPredicted RBP12.55□□□□□ -0.4
HMG20B-209ENST00000470356 KRTAP2-2Q9BYT5 123 aa12.53□□□□□ -0.4
HMG20B-209ENST00000470356 KRTAP2-1Q9BYU5 128 aa12.53□□□□□ -0.4
HMG20B-209ENST00000470356 KRTAP10-12P60413 245 aa12.52□□□□□ -0.41
HMG20B-209ENST00000470356 SPTSSBQ8NFR3 76 aa12.52□□□□□ -0.41
HMG20B-209ENST00000470356 SPRR2DP22532 72 aa12.49□□□□□ -0.41
HMG20B-209ENST00000470356 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
HMG20B-209ENST00000470356 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
HMG20B-209ENST00000470356 CHKB-CPT1BH3BT56 60 aa12.34□□□□□ -0.43
HMG20B-209ENST00000470356 LCE3BQ5TA77 95 aa12.18□□□□□ -0.46
HMG20B-209ENST00000470356 SNURFQ9Y675 71 aa12.17□□□□□ -0.46
HMG20B-209ENST00000470356 K7ERU9 68 aa12.12□□□□□ -0.47
HMG20B-209ENST00000470356 SPANXA2-OT1Q8N9U9 137 aa12.1□□□□□ -0.47
HMG20B-209ENST00000470356 KRTAP13-4Q3LI77 160 aa12.07□□□□□ -0.48
HMG20B-209ENST00000470356 CAMK2N1Q7Z7J9 78 aa11.98□□□□□ -0.49
HMG20B-209ENST00000470356 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
HMG20B-209ENST00000470356 KRTAP19-7Q3SYF9 63 aa11.78□□□□□ -0.52
HMG20B-209ENST00000470356 COA5Q86WW8 74 aa11.75□□□□□ -0.53
HMG20B-209ENST00000470356 LCE5AQ5TCM9 118 aa11.74□□□□□ -0.53
HMG20B-209ENST00000470356 DSTQ03001 7570 aaKnown RBP11.71□□□□□ -0.53
HMG20B-209ENST00000470356 MT1EP04732 61 aa11.69□□□□□ -0.54
HMG20B-209ENST00000470356 SEC61GP60059 68 aa11.68□□□□□ -0.54
HMG20B-209ENST00000470356 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
HMG20B-209ENST00000470356 A0A0D9SG42 100 aa11.66□□□□□ -0.54
HMG20B-209ENST00000470356 KRTAP19-3Q7Z4W3 81 aa11.65□□□□□ -0.54
HMG20B-209ENST00000470356 SPATA8Q6RVD6 105 aa11.58□□□□□ -0.56
HMG20B-209ENST00000470356 A0A1B0GU33 70 aa11.52□□□□□ -0.57
HMG20B-209ENST00000470356 SPINT4Q6UDR6 99 aa11.52□□□□□ -0.57
HMG20B-209ENST00000470356 KRTAP12-1P59990 96 aa11.44□□□□□ -0.58
HMG20B-209ENST00000470356 GPR98Q8WXG9 6306 aa11.43□□□□□ -0.58
HMG20B-209ENST00000470356 COX7CP15954 63 aa11.4□□□□□ -0.58
HMG20B-209ENST00000470356 KRTAP19-5Q3LI72 72 aa11.4□□□□□ -0.58
HMG20B-209ENST00000470356 KRTAP4-9Q9BYQ8 210 aa11.39□□□□□ -0.59
HMG20B-209ENST00000470356 MT1GP13640 62 aa11.37□□□□□ -0.59
HMG20B-209ENST00000470356 CYSTM1Q9H1C7 97 aa11.37□□□□□ -0.59
HMG20B-209ENST00000470356 H7BZZ5 65 aa11.32□□□□□ -0.6
HMG20B-209ENST00000470356 PP632Q6XCG6 107 aa11.26□□□□□ -0.61
HMG20B-209ENST00000470356 SMIM26A0A096LP01 95 aa11.2□□□□□ -0.62
HMG20B-209ENST00000470356 A0A1B0GU69 56 aa11.17□□□□□ -0.62
HMG20B-209ENST00000470356 MT1MQ8N339 61 aa11.15□□□□□ -0.62
HMG20B-209ENST00000470356 MT1LQ93083 61 aa11.12□□□□□ -0.63
HMG20B-209ENST00000470356 LCE1DQ5T752 114 aa11.11□□□□□ -0.63
HMG20B-209ENST00000470356 A8MU10 97 aa11.08□□□□□ -0.64
HMG20B-209ENST00000470356 LCE4AQ5TA78 99 aa11.05□□□□□ -0.64
HMG20B-209ENST00000470356 LCE3AQ5TA76 89 aa11□□□□□ -0.65
HMG20B-209ENST00000470356 C10orf95Q9H7T3 257 aa10.99□□□□□ -0.65
HMG20B-209ENST00000470356 TNP1P09430 55 aa10.98□□□□□ -0.65
HMG20B-209ENST00000470356 HMCN1Q96RW7 5635 aa10.94□□□□□ -0.66
HMG20B-209ENST00000470356 MT4P47944 62 aa10.94□□□□□ -0.66
HMG20B-209ENST00000470356 KRTAP4-3Q9BYR4 195 aa10.88□□□□□ -0.67
HMG20B-209ENST00000470356 KRTAP5-4Q6L8H1 288 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms