RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
LSM2-210ENST00000470086 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
LSM2-210ENST00000470086 IFI27L1Q96BM0 104 aa3.67□□□□□ -1.82
LSM2-210ENST00000470086 H3BPC8 53 aa3.66□□□□□ -1.82
LSM2-210ENST00000470086 PMCHL2Q9BQD1 86 aa3.66□□□□□ -1.82
LSM2-210ENST00000470086 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
LSM2-210ENST00000470086 hDV103S1A0JD37 113 aa3.65□□□□□ -1.83
LSM2-210ENST00000470086 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
LSM2-210ENST00000470086 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
LSM2-210ENST00000470086 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
LSM2-210ENST00000470086 Q5VV11 94 aa3.64□□□□□ -1.83
LSM2-210ENST00000470086 H3BUT2 72 aa3.63□□□□□ -1.83
LSM2-210ENST00000470086 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
LSM2-210ENST00000470086 H3BQ85 93 aa3.62□□□□□ -1.83
LSM2-210ENST00000470086 KRTDAPP60985 99 aa3.62□□□□□ -1.83
LSM2-210ENST00000470086 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
LSM2-210ENST00000470086 ATOX1O00244 68 aa3.61□□□□□ -1.83
LSM2-210ENST00000470086 IGKCP01834 107 aa3.61□□□□□ -1.83
LSM2-210ENST00000470086 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
LSM2-210ENST00000470086 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
LSM2-210ENST00000470086 F8WEM9 126 aa3.6□□□□□ -1.83
LSM2-210ENST00000470086 Q6JHZ5 121 aa3.6□□□□□ -1.83
LSM2-210ENST00000470086 Q6ZQT0 140 aa3.6□□□□□ -1.83
LSM2-210ENST00000470086 SPINK7P58062 85 aa3.59□□□□□ -1.83
LSM2-210ENST00000470086 RBM3P98179 157 aaKnown RBP3.59□□□□□ -1.83
LSM2-210ENST00000470086 Q6ZQY7 126 aa3.59□□□□□ -1.83
LSM2-210ENST00000470086 C14orf132Q9NPU4 83 aa3.59□□□□□ -1.83
LSM2-210ENST00000470086 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
LSM2-210ENST00000470086 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
LSM2-210ENST00000470086 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
LSM2-210ENST00000470086 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
LSM2-210ENST00000470086 A0A087WSZ3 146 aa3.57□□□□□ -1.84
LSM2-210ENST00000470086 ROMO1P60602 79 aa3.57□□□□□ -1.84
LSM2-210ENST00000470086 Q5W150 140 aa3.57□□□□□ -1.84
LSM2-210ENST00000470086 SMIM11BQ8TCY0 68 aa3.57□□□□□ -1.84
LSM2-210ENST00000470086 CASC2Q6XLA1 102 aa3.56□□□□□ -1.84
LSM2-210ENST00000470086 TRAV13-2A0A0B4J235 113 aa3.55□□□□□ -1.84
LSM2-210ENST00000470086 CCKP06307 115 aa3.55□□□□□ -1.84
LSM2-210ENST00000470086 BAALC-AS2P0C853 105 aa3.54□□□□□ -1.84
LSM2-210ENST00000470086 PLNP26678 52 aa3.54□□□□□ -1.84
LSM2-210ENST00000470086 Q1T7F1 81 aa3.54□□□□□ -1.84
LSM2-210ENST00000470086 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
LSM2-210ENST00000470086 A0A1W2PPM0 123 aa3.53□□□□□ -1.84
LSM2-210ENST00000470086 LINC00575Q6W349 94 aa3.53□□□□□ -1.84
LSM2-210ENST00000470086 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
LSM2-210ENST00000470086 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
LSM2-210ENST00000470086 ZCCHC13Q8WW36 166 aaKnown RBP3.53□□□□□ -1.84
LSM2-210ENST00000470086 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
LSM2-210ENST00000470086 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
LSM2-210ENST00000470086 NDUFC1O43677 76 aa3.51□□□□□ -1.85
LSM2-210ENST00000470086 ETDBQ3ZM63 59 aa3.51□□□□□ -1.85
LSM2-210ENST00000470086 BVES-AS1Q5T3Y7 98 aa3.51□□□□□ -1.85
LSM2-210ENST00000470086 A0A1B0GU33 70 aa3.5□□□□□ -1.85
LSM2-210ENST00000470086 IGKV4-1P06312 121 aa3.5□□□□□ -1.85
LSM2-210ENST00000470086 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
LSM2-210ENST00000470086 ZNF815PA8K554 130 aa3.49□□□□□ -1.85
LSM2-210ENST00000470086 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
LSM2-210ENST00000470086 LEPROTL1O95214 131 aa3.48□□□□□ -1.85
LSM2-210ENST00000470086 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
LSM2-210ENST00000470086 SPATA45Q537H7 98 aa3.48□□□□□ -1.85
LSM2-210ENST00000470086 CYP4F30PQ9H0H9 118 aa3.48□□□□□ -1.85
LSM2-210ENST00000470086 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
LSM2-210ENST00000470086 MT1XP80297 61 aa3.47□□□□□ -1.85
LSM2-210ENST00000470086 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
LSM2-210ENST00000470086 HCG22E2RYF7 251 aa3.45□□□□□ -1.86
LSM2-210ENST00000470086 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
LSM2-210ENST00000470086 MUSTN1Q8IVN3 82 aa3.45□□□□□ -1.86
LSM2-210ENST00000470086 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
LSM2-210ENST00000470086 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.44□□□□□ -1.86
LSM2-210ENST00000470086 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
LSM2-210ENST00000470086 ACYP1P07311 99 aa3.42□□□□□ -1.86
LSM2-210ENST00000470086 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
LSM2-210ENST00000470086 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
LSM2-210ENST00000470086 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
LSM2-210ENST00000470086 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
LSM2-210ENST00000470086 HIGD1BQ9P298 99 aa3.39□□□□□ -1.87
LSM2-210ENST00000470086 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
LSM2-210ENST00000470086 C3orf79P0CE67 100 aa3.37□□□□□ -1.87
LSM2-210ENST00000470086 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
LSM2-210ENST00000470086 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
LSM2-210ENST00000470086 LINC00643Q86TS7 51 aa3.37□□□□□ -1.87
LSM2-210ENST00000470086 H7BZZ5 65 aa3.36□□□□□ -1.87
LSM2-210ENST00000470086 COX6CP09669 75 aa3.35□□□□□ -1.87
LSM2-210ENST00000470086 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
LSM2-210ENST00000470086 P0C880 135 aa3.34□□□□□ -1.87
LSM2-210ENST00000470086 CYSTM1Q9H1C7 97 aa3.34□□□□□ -1.87
LSM2-210ENST00000470086 R4GN34 69 aa3.34□□□□□ -1.87
LSM2-210ENST00000470086 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
LSM2-210ENST00000470086 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
LSM2-210ENST00000470086 TRAV22A0A0B4J277 110 aa3.32□□□□□ -1.88
LSM2-210ENST00000470086 IGKV3D-7A0A0C4DH55 119 aa3.32□□□□□ -1.88
LSM2-210ENST00000470086 TRBV7-4A0A0J9YYF1 115 aa3.31□□□□□ -1.88
LSM2-210ENST00000470086 MT4P47944 62 aa3.31□□□□□ -1.88
LSM2-210ENST00000470086 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
LSM2-210ENST00000470086 DMAC1Q96GE9 116 aa3.3□□□□□ -1.88
LSM2-210ENST00000470086 ORMDL1Q9P0S3 153 aa3.29□□□□□ -1.88
LSM2-210ENST00000470086 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
LSM2-210ENST00000470086 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
LSM2-210ENST00000470086 S4R3F8 94 aa3.26□□□□□ -1.89
LSM2-210ENST00000470086 MMP24-AS1A0A0U1RRL7 71 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms