RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
LSM2-209ENST00000470083 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
LSM2-209ENST00000470083 PSMB2P49721 201 aa4.88□□□□□ -1.63
LSM2-209ENST00000470083 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
LSM2-209ENST00000470083 COX6CP09669 75 aa4.87□□□□□ -1.63
LSM2-209ENST00000470083 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
LSM2-209ENST00000470083 FXYD2P54710 66 aa4.85□□□□□ -1.63
LSM2-209ENST00000470083 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
LSM2-209ENST00000470083 HIST1H2BLQ99880 126 aa4.85□□□□□ -1.63
LSM2-209ENST00000470083 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
LSM2-209ENST00000470083 C14orf144Q96I85 54 aa4.83□□□□□ -1.64
LSM2-209ENST00000470083 A8MUN3 132 aa4.82□□□□□ -1.64
LSM2-209ENST00000470083 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
LSM2-209ENST00000470083 NREPQ16612 68 aa4.81□□□□□ -1.64
LSM2-209ENST00000470083 S100A2P29034 98 aa4.8□□□□□ -1.64
LSM2-209ENST00000470083 HCG22E2RYF7 251 aa4.79□□□□□ -1.64
LSM2-209ENST00000470083 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
LSM2-209ENST00000470083 K7ERJ3 54 aa4.78□□□□□ -1.64
LSM2-209ENST00000470083 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
LSM2-209ENST00000470083 CXCL6P80162 114 aa4.78□□□□□ -1.64
LSM2-209ENST00000470083 PDE6GP18545 87 aa4.77□□□□□ -1.65
LSM2-209ENST00000470083 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
LSM2-209ENST00000470083 JMJD7-PLA2G4BH0Y9G9 81 aa4.76□□□□□ -1.65
LSM2-209ENST00000470083 H0YAA0 97 aa4.76□□□□□ -1.65
LSM2-209ENST00000470083 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
LSM2-209ENST00000470083 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
LSM2-209ENST00000470083 TSTD3H0UI37 97 aa4.72□□□□□ -1.65
LSM2-209ENST00000470083 SPATA45Q537H7 98 aa4.72□□□□□ -1.65
LSM2-209ENST00000470083 A0A087WVE0 104 aa4.71□□□□□ -1.66
LSM2-209ENST00000470083 SCGB1C2P0DMR2 95 aa4.71□□□□□ -1.66
LSM2-209ENST00000470083 C14orf132Q9NPU4 83 aa4.71□□□□□ -1.66
LSM2-209ENST00000470083 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
LSM2-209ENST00000470083 BPY2O14599 106 aa4.68□□□□□ -1.66
LSM2-209ENST00000470083 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
LSM2-209ENST00000470083 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
LSM2-209ENST00000470083 MT4P47944 62 aa4.66□□□□□ -1.66
LSM2-209ENST00000470083 HSD52Q0P140 79 aa4.66□□□□□ -1.66
LSM2-209ENST00000470083 Q8N9L7 120 aa4.66□□□□□ -1.66
LSM2-209ENST00000470083 VAMP8Q9BV40 100 aa4.64□□□□□ -1.67
LSM2-209ENST00000470083 NDUFC1O43677 76 aa4.63□□□□□ -1.67
LSM2-209ENST00000470083 ATXN8Q156A1 80 aa4.62□□□□□ -1.67
LSM2-209ENST00000470083 R4GN34 69 aa4.61□□□□□ -1.67
LSM2-209ENST00000470083 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
LSM2-209ENST00000470083 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
LSM2-209ENST00000470083 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
LSM2-209ENST00000470083 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
LSM2-209ENST00000470083 A0A1B0GV90 55 aa4.56□□□□□ -1.68
LSM2-209ENST00000470083 M0QZ58 72 aa4.54□□□□□ -1.68
LSM2-209ENST00000470083 CYP4F30PQ9H0H9 118 aa4.54□□□□□ -1.68
LSM2-209ENST00000470083 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
LSM2-209ENST00000470083 TP53AIP1Q9HCN2 124 aa4.52□□□□□ -1.69
LSM2-209ENST00000470083 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
LSM2-209ENST00000470083 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
LSM2-209ENST00000470083 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
LSM2-209ENST00000470083 MT1EP04732 61 aa4.49□□□□□ -1.69
LSM2-209ENST00000470083 P0C880 135 aa4.49□□□□□ -1.69
LSM2-209ENST00000470083 K7EP34 96 aa4.48□□□□□ -1.69
LSM2-209ENST00000470083 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
LSM2-209ENST00000470083 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
LSM2-209ENST00000470083 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
LSM2-209ENST00000470083 BATFQ16520 125 aa4.46□□□□□ -1.7
LSM2-209ENST00000470083 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
LSM2-209ENST00000470083 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
LSM2-209ENST00000470083 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
LSM2-209ENST00000470083 ACYP1P07311 99 aa4.4□□□□□ -1.71
LSM2-209ENST00000470083 MT1GP13640 62 aa4.4□□□□□ -1.71
LSM2-209ENST00000470083 UQCR10Q9UDW1 63 aa4.4□□□□□ -1.71
LSM2-209ENST00000470083 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
LSM2-209ENST00000470083 K7ERU9 68 aa4.39□□□□□ -1.71
LSM2-209ENST00000470083 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
LSM2-209ENST00000470083 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
LSM2-209ENST00000470083 H3BT86 120 aa4.35□□□□□ -1.71
LSM2-209ENST00000470083 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
LSM2-209ENST00000470083 PYY3Q5JQD4 70 aa4.32□□□□□ -1.72
LSM2-209ENST00000470083 MT1MQ8N339 61 aa4.31□□□□□ -1.72
LSM2-209ENST00000470083 PSPHP1O15172 72 aa4.3□□□□□ -1.72
LSM2-209ENST00000470083 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
LSM2-209ENST00000470083 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
LSM2-209ENST00000470083 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
LSM2-209ENST00000470083 M0R143 59 aa4.26□□□□□ -1.73
LSM2-209ENST00000470083 MP68P56378 58 aa4.25□□□□□ -1.73
LSM2-209ENST00000470083 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
LSM2-209ENST00000470083 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
LSM2-209ENST00000470083 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
LSM2-209ENST00000470083 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
LSM2-209ENST00000470083 J3QR89 54 aa4.24□□□□□ -1.73
LSM2-209ENST00000470083 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
LSM2-209ENST00000470083 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
LSM2-209ENST00000470083 ATOX1O00244 68 aa4.22□□□□□ -1.73
LSM2-209ENST00000470083 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
LSM2-209ENST00000470083 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
LSM2-209ENST00000470083 H0Y9P7 68 aa4.19□□□□□ -1.74
LSM2-209ENST00000470083 MT1LQ93083 61 aa4.19□□□□□ -1.74
LSM2-209ENST00000470083 UQCRQO14949 82 aa4.16□□□□□ -1.74
LSM2-209ENST00000470083 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
LSM2-209ENST00000470083 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
LSM2-209ENST00000470083 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
LSM2-209ENST00000470083 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
LSM2-209ENST00000470083 A0A0D9SG42 100 aa4.11□□□□□ -1.75
LSM2-209ENST00000470083 TAX1BP3O14907 124 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms