RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 SPINK7P58062 85 aa4.21□□□□□ -1.73
NPHP3-204ENST00000469232 KLKP1Q107X0 134 aa4.21□□□□□ -1.73
NPHP3-204ENST00000469232 C7orf65Q6ZTY9 151 aa4.21□□□□□ -1.73
NPHP3-204ENST00000469232 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.73
NPHP3-204ENST00000469232 HRES1P13985 223 aa4.21□□□□□ -1.74
NPHP3-204ENST00000469232 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
NPHP3-204ENST00000469232 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
NPHP3-204ENST00000469232 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
NPHP3-204ENST00000469232 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
NPHP3-204ENST00000469232 C20orf197Q8N268 126 aa4.17□□□□□ -1.74
NPHP3-204ENST00000469232 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
NPHP3-204ENST00000469232 CCDC179H3BU77 68 aa4.15□□□□□ -1.74
NPHP3-204ENST00000469232 SNURFQ9Y675 71 aa4.14□□□□□ -1.75
NPHP3-204ENST00000469232 MUC2Q02817 5179 aa4.14□□□□□ -1.75
NPHP3-204ENST00000469232 NDUFC1O43677 76 aa4.13□□□□□ -1.75
NPHP3-204ENST00000469232 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
NPHP3-204ENST00000469232 H7BZZ5 65 aa4.13□□□□□ -1.75
NPHP3-204ENST00000469232 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
NPHP3-204ENST00000469232 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
NPHP3-204ENST00000469232 PCP4P48539 62 aa4.1□□□□□ -1.75
NPHP3-204ENST00000469232 C4orf26Q17RF5 130 aa4.09□□□□□ -1.76
NPHP3-204ENST00000469232 A8MUN3 132 aa4.08□□□□□ -1.76
NPHP3-204ENST00000469232 DMAC1Q96GE9 116 aa4.08□□□□□ -1.76
NPHP3-204ENST00000469232 RBM12B-AS1Q9P1G2 102 aa4.08□□□□□ -1.76
NPHP3-204ENST00000469232 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
NPHP3-204ENST00000469232 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
NPHP3-204ENST00000469232 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
NPHP3-204ENST00000469232 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.77
NPHP3-204ENST00000469232 TMEM258P61165 79 aa4.03□□□□□ -1.77
NPHP3-204ENST00000469232 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.77
NPHP3-204ENST00000469232 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
NPHP3-204ENST00000469232 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
NPHP3-204ENST00000469232 ACYP2P14621 99 aa3.99□□□□□ -1.77
NPHP3-204ENST00000469232 MT1HP80294 61 aa3.99□□□□□ -1.77
NPHP3-204ENST00000469232 LCA10Q71F78 164 aa3.95□□□□□ -1.78
NPHP3-204ENST00000469232 S4R3F8 94 aa3.95□□□□□ -1.78
NPHP3-204ENST00000469232 COA5Q86WW8 74 aa3.94□□□□□ -1.78
NPHP3-204ENST00000469232 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
NPHP3-204ENST00000469232 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
NPHP3-204ENST00000469232 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
NPHP3-204ENST00000469232 H0YAA0 97 aa3.88□□□□□ -1.79
NPHP3-204ENST00000469232 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
NPHP3-204ENST00000469232 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
NPHP3-204ENST00000469232 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
NPHP3-204ENST00000469232 M0R2T5 61 aa3.81□□□□□ -1.8
NPHP3-204ENST00000469232 MT2AP02795 61 aa3.81□□□□□ -1.8
NPHP3-204ENST00000469232 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
NPHP3-204ENST00000469232 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
NPHP3-204ENST00000469232 MT1FP04733 61 aa3.77□□□□□ -1.81
NPHP3-204ENST00000469232 Q1T7F1 81 aa3.76□□□□□ -1.81
NPHP3-204ENST00000469232 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
NPHP3-204ENST00000469232 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
NPHP3-204ENST00000469232 P0C880 135 aa3.74□□□□□ -1.81
NPHP3-204ENST00000469232 V9GYY9 64 aa3.73□□□□□ -1.81
NPHP3-204ENST00000469232 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
NPHP3-204ENST00000469232 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
NPHP3-204ENST00000469232 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
NPHP3-204ENST00000469232 A0A1B0GU69 56 aa3.7□□□□□ -1.82
NPHP3-204ENST00000469232 SEC61GP60059 68 aa3.69□□□□□ -1.82
NPHP3-204ENST00000469232 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
NPHP3-204ENST00000469232 M0QZ58 72 aa3.66□□□□□ -1.82
NPHP3-204ENST00000469232 A0A1B0GU33 70 aa3.65□□□□□ -1.83
NPHP3-204ENST00000469232 Q5VV11 94 aa3.65□□□□□ -1.83
NPHP3-204ENST00000469232 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
NPHP3-204ENST00000469232 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
NPHP3-204ENST00000469232 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
NPHP3-204ENST00000469232 PSPHP1O15172 72 aa3.61□□□□□ -1.83
NPHP3-204ENST00000469232 R4GN34 69 aa3.61□□□□□ -1.83
NPHP3-204ENST00000469232 A6NN06 94 aa3.59□□□□□ -1.84
NPHP3-204ENST00000469232 UQCR11O14957 56 aa3.59□□□□□ -1.84
NPHP3-204ENST00000469232 MT1BP07438 61 aa3.57□□□□□ -1.84
NPHP3-204ENST00000469232 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
NPHP3-204ENST00000469232 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NPHP3-204ENST00000469232 SVIPQ8NHG7 77 aa3.55□□□□□ -1.84
NPHP3-204ENST00000469232 USH2AO75445 5202 aa3.54□□□□□ -1.84
NPHP3-204ENST00000469232 MT3P25713 68 aa3.52□□□□□ -1.85
NPHP3-204ENST00000469232 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
NPHP3-204ENST00000469232 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
NPHP3-204ENST00000469232 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
NPHP3-204ENST00000469232 A6NED7 52 aa3.5□□□□□ -1.85
NPHP3-204ENST00000469232 A8MU10 97 aa3.5□□□□□ -1.85
NPHP3-204ENST00000469232 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
NPHP3-204ENST00000469232 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
NPHP3-204ENST00000469232 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
NPHP3-204ENST00000469232 A0A0D9SG42 100 aa3.47□□□□□ -1.85
NPHP3-204ENST00000469232 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
NPHP3-204ENST00000469232 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
NPHP3-204ENST00000469232 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
NPHP3-204ENST00000469232 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
NPHP3-204ENST00000469232 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
NPHP3-204ENST00000469232 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
NPHP3-204ENST00000469232 MT1XP80297 61 aa3.42□□□□□ -1.86
NPHP3-204ENST00000469232 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
NPHP3-204ENST00000469232 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
NPHP3-204ENST00000469232 K7ERS5 55 aa3.36□□□□□ -1.87
NPHP3-204ENST00000469232 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
NPHP3-204ENST00000469232 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.87
NPHP3-204ENST00000469232 PRO2289Q9P1D8 64 aa3.34□□□□□ -1.87
NPHP3-204ENST00000469232 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
NPHP3-204ENST00000469232 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms