RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 A8MUU9 505 aa2.17□□□□□ -2.06
TMEM39A-204ENST00000468545 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
TMEM39A-204ENST00000468545 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
TMEM39A-204ENST00000468545 ATOX1O00244 68 aa2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 UQCRQO14949 82 aa2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 Q5W150 140 aa2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 ZCCHC13Q8WW36 166 aaKnown RBP2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
TMEM39A-204ENST00000468545 LRP2P98164 4655 aa2.15□□□□□ -2.06
TMEM39A-204ENST00000468545 H0Y9P7 68 aa2.15□□□□□ -2.07
TMEM39A-204ENST00000468545 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
TMEM39A-204ENST00000468545 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 MP68P56378 58 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 SMIM20Q8N5G0 67 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 LINC00208Q96KT6 92 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 ANAPC13Q9BS18 74 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 RNF213Q63HN8 5207 aa2.14□□□□□ -2.07
TMEM39A-204ENST00000468545 TRAV22A0A0B4J277 110 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 C5orf47Q569G3 176 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 C1orf64Q8NEQ6 169 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 SNURFQ9Y675 71 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 UBR4Q5T4S7 5183 aa2.13□□□□□ -2.07
TMEM39A-204ENST00000468545 SPINK7P58062 85 aa2.12□□□□□ -2.07
TMEM39A-204ENST00000468545 C20orf197Q8N268 126 aa2.12□□□□□ -2.07
TMEM39A-204ENST00000468545 COX7CP15954 63 aa2.11□□□□□ -2.07
TMEM39A-204ENST00000468545 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
TMEM39A-204ENST00000468545 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
TMEM39A-204ENST00000468545 CCDC179H3BU77 68 aa2.1□□□□□ -2.07
TMEM39A-204ENST00000468545 C7orf65Q6ZTY9 151 aa2.1□□□□□ -2.07
TMEM39A-204ENST00000468545 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
TMEM39A-204ENST00000468545 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
TMEM39A-204ENST00000468545 A0A0U1RQV1 116 aa2.09□□□□□ -2.07
TMEM39A-204ENST00000468545 H3BPC8 53 aa2.09□□□□□ -2.07
TMEM39A-204ENST00000468545 KLKP1Q107X0 134 aa2.09□□□□□ -2.07
TMEM39A-204ENST00000468545 FAM236DA0A1B0GTK5 79 aa2.08□□□□□ -2.08
TMEM39A-204ENST00000468545 FAM236CP0DP71 79 aa2.08□□□□□ -2.08
TMEM39A-204ENST00000468545 HRES1P13985 223 aa2.08□□□□□ -2.08
TMEM39A-204ENST00000468545 C4orf26Q17RF5 130 aa2.08□□□□□ -2.08
TMEM39A-204ENST00000468545 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
TMEM39A-204ENST00000468545 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
TMEM39A-204ENST00000468545 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
TMEM39A-204ENST00000468545 MUC2Q02817 5179 aa2.06□□□□□ -2.08
TMEM39A-204ENST00000468545 H7BZZ5 65 aa2.03□□□□□ -2.08
TMEM39A-204ENST00000468545 NDUFC1O43677 76 aa2.03□□□□□ -2.08
TMEM39A-204ENST00000468545 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
TMEM39A-204ENST00000468545 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
TMEM39A-204ENST00000468545 ACYP2P14621 99 aa2.01□□□□□ -2.09
TMEM39A-204ENST00000468545 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
TMEM39A-204ENST00000468545 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
TMEM39A-204ENST00000468545 A8MUN3 132 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 CHKB-CPT1BH3BT56 60 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 M0R2T5 61 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 DMAC1Q96GE9 116 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 S4R3F8 94 aa2□□□□□ -2.09
TMEM39A-204ENST00000468545 TMEM258P61165 79 aa1.99□□□□□ -2.09
TMEM39A-204ENST00000468545 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
TMEM39A-204ENST00000468545 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
TMEM39A-204ENST00000468545 LCA10Q71F78 164 aa1.98□□□□□ -2.09
TMEM39A-204ENST00000468545 COA5Q86WW8 74 aa1.98□□□□□ -2.09
TMEM39A-204ENST00000468545 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
TMEM39A-204ENST00000468545 ATP5EP56381 51 aaPredicted RBP1.97□□□□□ -2.09
TMEM39A-204ENST00000468545 MT1HP80294 61 aa1.96□□□□□ -2.1
TMEM39A-204ENST00000468545 CSAG1Q6PB30 78 aa1.96□□□□□ -2.1
TMEM39A-204ENST00000468545 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
TMEM39A-204ENST00000468545 SERP1Q9Y6X1 66 aa1.94□□□□□ -2.1
TMEM39A-204ENST00000468545 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
TMEM39A-204ENST00000468545 SEC61GP60059 68 aa1.9□□□□□ -2.11
TMEM39A-204ENST00000468545 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
TMEM39A-204ENST00000468545 SMIM26A0A096LP01 95 aa1.89□□□□□ -2.11
TMEM39A-204ENST00000468545 KRTAP10-10P60014 251 aa1.89□□□□□ -2.11
TMEM39A-204ENST00000468545 RPS28P62857 69 aaKnown RBP1.89□□□□□ -2.11
TMEM39A-204ENST00000468545 A0A1B0GU69 56 aa1.88□□□□□ -2.11
TMEM39A-204ENST00000468545 MT2AP02795 61 aa1.88□□□□□ -2.11
TMEM39A-204ENST00000468545 P0C880 135 aa1.88□□□□□ -2.11
TMEM39A-204ENST00000468545 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
TMEM39A-204ENST00000468545 PSPHP1O15172 72 aa1.87□□□□□ -2.11
TMEM39A-204ENST00000468545 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
TMEM39A-204ENST00000468545 H0YAA0 97 aa1.86□□□□□ -2.11
TMEM39A-204ENST00000468545 MT1FP04733 61 aa1.86□□□□□ -2.11
TMEM39A-204ENST00000468545 V9GYY9 64 aa1.86□□□□□ -2.11
TMEM39A-204ENST00000468545 A0A1B0GU33 70 aa1.85□□□□□ -2.11
TMEM39A-204ENST00000468545 Q1T7F1 81 aa1.85□□□□□ -2.11
TMEM39A-204ENST00000468545 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
TMEM39A-204ENST00000468545 M0QZ58 72 aa1.84□□□□□ -2.11
TMEM39A-204ENST00000468545 LINC01554Q52M75 96 aa1.84□□□□□ -2.11
TMEM39A-204ENST00000468545 R4GN34 69 aa1.84□□□□□ -2.11
TMEM39A-204ENST00000468545 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
TMEM39A-204ENST00000468545 A0A0D9SG42 100 aa1.82□□□□□ -2.12
TMEM39A-204ENST00000468545 CRIPTQ9P021 101 aa1.82□□□□□ -2.12
TMEM39A-204ENST00000468545 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
TMEM39A-204ENST00000468545 Q5VV11 94 aa1.81□□□□□ -2.12
TMEM39A-204ENST00000468545 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
TMEM39A-204ENST00000468545 USH2AO75445 5202 aa1.8□□□□□ -2.12
TMEM39A-204ENST00000468545 A6NED7 52 aa1.8□□□□□ -2.12
TMEM39A-204ENST00000468545 UQCR11O14957 56 aa1.8□□□□□ -2.12
TMEM39A-204ENST00000468545 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
TMEM39A-204ENST00000468545 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms