RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 KMT2DO14686 5537 aa10.6□□□□□ -0.71
PTCH1-210ENST00000468211 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
PTCH1-210ENST00000468211 KRTAP20-1Q3LI63 56 aa10.57□□□□□ -0.72
PTCH1-210ENST00000468211 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
PTCH1-210ENST00000468211 MDN1Q9NU22 5596 aa10.55□□□□□ -0.72
PTCH1-210ENST00000468211 H0YAA0 97 aa10.46□□□□□ -0.73
PTCH1-210ENST00000468211 NDUFC1O43677 76 aa10.46□□□□□ -0.73
PTCH1-210ENST00000468211 H0Y9P7 68 aa10.44□□□□□ -0.74
PTCH1-210ENST00000468211 UQCRQO14949 82 aa10.42□□□□□ -0.74
PTCH1-210ENST00000468211 HIST1H4AP62805 103 aaKnown RBP10.39□□□□□ -0.75
PTCH1-210ENST00000468211 ADM2Q7Z4H4 148 aa10.39□□□□□ -0.75
PTCH1-210ENST00000468211 ACYP1P07311 99 aa10.38□□□□□ -0.75
PTCH1-210ENST00000468211 ATOX1O00244 68 aa10.36□□□□□ -0.75
PTCH1-210ENST00000468211 PCP4L1A6NKN8 68 aa10.35□□□□□ -0.75
PTCH1-210ENST00000468211 ATP5EP2Q5VTU8 51 aa10.34□□□□□ -0.75
PTCH1-210ENST00000468211 A8MUN3 132 aa10.32□□□□□ -0.76
PTCH1-210ENST00000468211 MT1XP80297 61 aa10.32□□□□□ -0.76
PTCH1-210ENST00000468211 FAM240AA0A1B0GVK7 77 aa10.3□□□□□ -0.76
PTCH1-210ENST00000468211 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
PTCH1-210ENST00000468211 LINC00208Q96KT6 92 aa10.25□□□□□ -0.77
PTCH1-210ENST00000468211 PRO2289Q9P1D8 64 aa10.23□□□□□ -0.77
PTCH1-210ENST00000468211 KRTAP2-3P0C7H8 128 aa10.21□□□□□ -0.77
PTCH1-210ENST00000468211 KRTAP2-4Q9BYR9 128 aa10.21□□□□□ -0.77
PTCH1-210ENST00000468211 SPRR2EP22531 72 aa10.18□□□□□ -0.78
PTCH1-210ENST00000468211 SPRR2BP35325 72 aa10.18□□□□□ -0.78
PTCH1-210ENST00000468211 SPRR2AP35326 72 aa10.18□□□□□ -0.78
PTCH1-210ENST00000468211 PLAC4Q8WY50 150 aa10.17□□□□□ -0.78
PTCH1-210ENST00000468211 P0C880 135 aa10.16□□□□□ -0.78
PTCH1-210ENST00000468211 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
PTCH1-210ENST00000468211 LINC00643Q86TS7 51 aa10.13□□□□□ -0.79
PTCH1-210ENST00000468211 KRTAP8-1Q8IUC2 63 aa10.11□□□□□ -0.79
PTCH1-210ENST00000468211 R4GN34 69 aa10.1□□□□□ -0.79
PTCH1-210ENST00000468211 MP68P56378 58 aa10.08□□□□□ -0.8
PTCH1-210ENST00000468211 KRTAP12-2P59991 146 aa10.08□□□□□ -0.8
PTCH1-210ENST00000468211 M0QZ58 72 aa10.04□□□□□ -0.8
PTCH1-210ENST00000468211 LCE1AQ5T7P2 110 aa10.04□□□□□ -0.8
PTCH1-210ENST00000468211 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
PTCH1-210ENST00000468211 KRTAP4-8A0A0G2JLE6 195 aa10.01□□□□□ -0.81
PTCH1-210ENST00000468211 KRTAP4-8Q9BYQ9 185 aa10.01□□□□□ -0.81
PTCH1-210ENST00000468211 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
PTCH1-210ENST00000468211 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
PTCH1-210ENST00000468211 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
PTCH1-210ENST00000468211 H3BPC8 53 aa9.88□□□□□ -0.83
PTCH1-210ENST00000468211 KRTAP2-2Q9BYT5 123 aa9.87□□□□□ -0.83
PTCH1-210ENST00000468211 KRTAP2-1Q9BYU5 128 aa9.87□□□□□ -0.83
PTCH1-210ENST00000468211 KRTAP10-7P60409 375 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-210ENST00000468211 SPRR2DP22532 72 aa9.83□□□□□ -0.84
PTCH1-210ENST00000468211 KRTAP10-12P60413 245 aa9.78□□□□□ -0.84
PTCH1-210ENST00000468211 A0A1B0GV90 55 aa9.77□□□□□ -0.85
PTCH1-210ENST00000468211 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
PTCH1-210ENST00000468211 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
PTCH1-210ENST00000468211 ACYP2P14621 99 aa9.62□□□□□ -0.87
PTCH1-210ENST00000468211 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
PTCH1-210ENST00000468211 LCE3BQ5TA77 95 aa9.6□□□□□ -0.87
PTCH1-210ENST00000468211 J3QR89 54 aa9.58□□□□□ -0.88
PTCH1-210ENST00000468211 SPTSSBQ8NFR3 76 aa9.51□□□□□ -0.89
PTCH1-210ENST00000468211 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
PTCH1-210ENST00000468211 KRTAP13-4Q3LI77 160 aa9.4□□□□□ -0.9
PTCH1-210ENST00000468211 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
PTCH1-210ENST00000468211 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
PTCH1-210ENST00000468211 KRTAP19-7Q3SYF9 63 aa9.24□□□□□ -0.93
PTCH1-210ENST00000468211 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
PTCH1-210ENST00000468211 LCE5AQ5TCM9 118 aa9.19□□□□□ -0.94
PTCH1-210ENST00000468211 SPANXA2-OT1Q8N9U9 137 aa9.19□□□□□ -0.94
PTCH1-210ENST00000468211 DSTQ03001 7570 aaKnown RBP9.17□□□□□ -0.94
PTCH1-210ENST00000468211 MT1EP04732 61 aa9.15□□□□□ -0.94
PTCH1-210ENST00000468211 KRTAP19-3Q7Z4W3 81 aa9.11□□□□□ -0.95
PTCH1-210ENST00000468211 K7ERU9 68 aa9.09□□□□□ -0.95
PTCH1-210ENST00000468211 KRTAP4-9Q9BYQ8 210 aa9.06□□□□□ -0.96
PTCH1-210ENST00000468211 GPR98Q8WXG9 6306 aa9.04□□□□□ -0.96
PTCH1-210ENST00000468211 A0A0D9SG42 100 aa9.02□□□□□ -0.97
PTCH1-210ENST00000468211 COA5Q86WW8 74 aa8.99□□□□□ -0.97
PTCH1-210ENST00000468211 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
PTCH1-210ENST00000468211 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
PTCH1-210ENST00000468211 KRTAP19-5Q3LI72 72 aa8.92□□□□□ -0.98
PTCH1-210ENST00000468211 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
PTCH1-210ENST00000468211 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
PTCH1-210ENST00000468211 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
PTCH1-210ENST00000468211 MT1GP13640 62 aa8.85□□□□□ -0.99
PTCH1-210ENST00000468211 SEC61GP60059 68 aa8.85□□□□□ -0.99
PTCH1-210ENST00000468211 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
PTCH1-210ENST00000468211 A0A1B0GU33 70 aa8.81□□□□□ -1
PTCH1-210ENST00000468211 LCE1DQ5T752 114 aa8.79□□□□□ -1
PTCH1-210ENST00000468211 MT1MQ8N339 61 aa8.74□□□□□ -1.01
PTCH1-210ENST00000468211 PP632Q6XCG6 107 aa8.72□□□□□ -1.01
PTCH1-210ENST00000468211 MT1LQ93083 61 aa8.7□□□□□ -1.02
PTCH1-210ENST00000468211 HMCN1Q96RW7 5635 aa8.67□□□□□ -1.02
PTCH1-210ENST00000468211 MT4P47944 62 aa8.65□□□□□ -1.02
PTCH1-210ENST00000468211 LCE4AQ5TA78 99 aa8.65□□□□□ -1.02
PTCH1-210ENST00000468211 COX7CP15954 63 aa8.62□□□□□ -1.03
PTCH1-210ENST00000468211 KRTAP4-3Q9BYR4 195 aa8.61□□□□□ -1.03
PTCH1-210ENST00000468211 H7BZZ5 65 aa8.6□□□□□ -1.03
PTCH1-210ENST00000468211 A8MU10 97 aa8.57□□□□□ -1.04
PTCH1-210ENST00000468211 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
PTCH1-210ENST00000468211 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
PTCH1-210ENST00000468211 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
PTCH1-210ENST00000468211 A0A1B0GU69 56 aa8.5□□□□□ -1.05
PTCH1-210ENST00000468211 AHNAK2Q8IVF2 5795 aa8.5□□□□□ -1.05
PTCH1-210ENST00000468211 KRTAP5-4Q6L8H1 288 aa8.49□□□□□ -1.05
PTCH1-210ENST00000468211 TNP1P09430 55 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms