RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
YBX1-204ENST00000467957 H3BPC8 53 aa8.66□□□□□ -1.02
YBX1-204ENST00000467957 TRAV7A0A075B6U4 112 aa8.65□□□□□ -1.02
YBX1-204ENST00000467957 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
YBX1-204ENST00000467957 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
YBX1-204ENST00000467957 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
YBX1-204ENST00000467957 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
YBX1-204ENST00000467957 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
YBX1-204ENST00000467957 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
YBX1-204ENST00000467957 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
YBX1-204ENST00000467957 A8MUN3 132 aa8.5□□□□□ -1.05
YBX1-204ENST00000467957 NDUFC1O43677 76 aa8.43□□□□□ -1.06
YBX1-204ENST00000467957 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
YBX1-204ENST00000467957 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
YBX1-204ENST00000467957 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
YBX1-204ENST00000467957 COX7CP15954 63 aa8.39□□□□□ -1.07
YBX1-204ENST00000467957 H0YAA0 97 aa8.37□□□□□ -1.07
YBX1-204ENST00000467957 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
YBX1-204ENST00000467957 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
YBX1-204ENST00000467957 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
YBX1-204ENST00000467957 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
YBX1-204ENST00000467957 MT1BP07438 61 aa8.33□□□□□ -1.08
YBX1-204ENST00000467957 Q5VV11 94 aa8.32□□□□□ -1.08
YBX1-204ENST00000467957 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
YBX1-204ENST00000467957 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
YBX1-204ENST00000467957 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
YBX1-204ENST00000467957 ACYP2P14621 99 aa8.22□□□□□ -1.09
YBX1-204ENST00000467957 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
YBX1-204ENST00000467957 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
YBX1-204ENST00000467957 A6NN06 94 aa8.17□□□□□ -1.1
YBX1-204ENST00000467957 H7BZZ5 65 aa8.17□□□□□ -1.1
YBX1-204ENST00000467957 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
YBX1-204ENST00000467957 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
YBX1-204ENST00000467957 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
YBX1-204ENST00000467957 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
YBX1-204ENST00000467957 P0C880 135 aa8.06□□□□□ -1.12
YBX1-204ENST00000467957 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
YBX1-204ENST00000467957 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
YBX1-204ENST00000467957 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
YBX1-204ENST00000467957 R4GN34 69 aa8.02□□□□□ -1.13
YBX1-204ENST00000467957 COA5Q86WW8 74 aa8□□□□□ -1.13
YBX1-204ENST00000467957 M0QZ58 72 aa7.94□□□□□ -1.14
YBX1-204ENST00000467957 ATP5EP56381 51 aaPredicted RBP7.92□□□□□ -1.14
YBX1-204ENST00000467957 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
YBX1-204ENST00000467957 TMEM258P61165 79 aa7.88□□□□□ -1.15
YBX1-204ENST00000467957 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
YBX1-204ENST00000467957 MT1XP80297 61 aa7.84□□□□□ -1.15
YBX1-204ENST00000467957 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
YBX1-204ENST00000467957 KRTAP5-9P26371 169 aa7.73□□□□□ -1.17
YBX1-204ENST00000467957 PCP4P48539 62 aa7.72□□□□□ -1.17
YBX1-204ENST00000467957 SEC61GP60059 68 aa7.67□□□□□ -1.18
YBX1-204ENST00000467957 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
YBX1-204ENST00000467957 SERP1Q9Y6X1 66 aa7.65□□□□□ -1.18
YBX1-204ENST00000467957 NEBP20929 6669 aa7.6□□□□□ -1.19
YBX1-204ENST00000467957 A0A1B0GU69 56 aa7.58□□□□□ -1.2
YBX1-204ENST00000467957 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
YBX1-204ENST00000467957 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
YBX1-204ENST00000467957 KMT2DO14686 5537 aa7.53□□□□□ -1.2
YBX1-204ENST00000467957 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
YBX1-204ENST00000467957 A0A1B0GU33 70 aa7.51□□□□□ -1.21
YBX1-204ENST00000467957 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
YBX1-204ENST00000467957 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
YBX1-204ENST00000467957 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
YBX1-204ENST00000467957 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
YBX1-204ENST00000467957 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
YBX1-204ENST00000467957 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
YBX1-204ENST00000467957 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
YBX1-204ENST00000467957 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
YBX1-204ENST00000467957 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
YBX1-204ENST00000467957 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
YBX1-204ENST00000467957 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
YBX1-204ENST00000467957 V9GYY9 64 aa7.36□□□□□ -1.23
YBX1-204ENST00000467957 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
YBX1-204ENST00000467957 SPRR2EP22531 72 aa7.34□□□□□ -1.23
YBX1-204ENST00000467957 SPRR2BP35325 72 aa7.34□□□□□ -1.23
YBX1-204ENST00000467957 SPRR2AP35326 72 aa7.34□□□□□ -1.23
YBX1-204ENST00000467957 Q1T7F1 81 aa7.34□□□□□ -1.23
YBX1-204ENST00000467957 KRTAP20-1Q3LI63 56 aa7.34□□□□□ -1.23
YBX1-204ENST00000467957 A0A0D9SG42 100 aa7.33□□□□□ -1.24
YBX1-204ENST00000467957 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
YBX1-204ENST00000467957 UQCR11O14957 56 aa7.24□□□□□ -1.25
YBX1-204ENST00000467957 A8MU10 97 aa7.23□□□□□ -1.25
YBX1-204ENST00000467957 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
YBX1-204ENST00000467957 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
YBX1-204ENST00000467957 PSPHP1O15172 72 aa7.22□□□□□ -1.25
YBX1-204ENST00000467957 KRTAP2-3P0C7H8 128 aa7.21□□□□□ -1.26
YBX1-204ENST00000467957 KRTAP2-4Q9BYR9 128 aa7.21□□□□□ -1.26
YBX1-204ENST00000467957 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
YBX1-204ENST00000467957 SPRR2DP22532 72 aa7.09□□□□□ -1.27
YBX1-204ENST00000467957 KRTAP19-7Q3SYF9 63 aa7.02□□□□□ -1.29
YBX1-204ENST00000467957 A6NED7 52 aa7.01□□□□□ -1.29
YBX1-204ENST00000467957 KRTAP2-2Q9BYT5 123 aa6.99□□□□□ -1.29
YBX1-204ENST00000467957 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
YBX1-204ENST00000467957 MT1EP04732 61 aa6.94□□□□□ -1.3
YBX1-204ENST00000467957 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
YBX1-204ENST00000467957 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
YBX1-204ENST00000467957 K7ERS5 55 aa6.89□□□□□ -1.31
YBX1-204ENST00000467957 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
YBX1-204ENST00000467957 TNP1P09430 55 aa6.86□□□□□ -1.31
YBX1-204ENST00000467957 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms