RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	H1FX-AS1	Q4G0G2	97 aa		6.18	□□□□□ -1.42
HDLBP-231	ENST00000467435	PRR15L	Q9BU68	103 aa		6.18	□□□□□ -1.42
HDLBP-231	ENST00000467435		S4R3F8	94 aa		6.17	□□□□□ -1.42
HDLBP-231	ENST00000467435	PSPHP1	O15172	72 aa		6.16	□□□□□ -1.42
HDLBP-231	ENST00000467435	LCA10	Q71F78	164 aa		6.14	□□□□□ -1.43
HDLBP-231	ENST00000467435		Q5VV11	94 aa		6.11	□□□□□ -1.43
HDLBP-231	ENST00000467435		A0A1B0GU69	56 aa		6.1	□□□□□ -1.43
HDLBP-231	ENST00000467435	KRTAP3-3	Q9BYR6	98 aa		6.1	□□□□□ -1.43
HDLBP-231	ENST00000467435	SEC61G	P60059	68 aa		6.04	□□□□□ -1.44
HDLBP-231	ENST00000467435	KRTAP19-2	Q3LHN2	52 aa		6.04	□□□□□ -1.44
HDLBP-231	ENST00000467435		A6NED7	52 aa		5.99	□□□□□ -1.45
HDLBP-231	ENST00000467435	CSAG1	Q6PB30	78 aa		5.99	□□□□□ -1.45
HDLBP-231	ENST00000467435	BRK1	Q8WUW1	75 aa		5.96	□□□□□ -1.46
HDLBP-231	ENST00000467435	UBR4	Q5T4S7	5183 aa		5.96	□□□□□ -1.46
HDLBP-231	ENST00000467435	UQCR11	O14957	56 aa		5.9	□□□□□ -1.46
HDLBP-231	ENST00000467435	KRTAP10-6	P60371	365 aa	Predicted RBP	5.89	□□□□□ -1.47
HDLBP-231	ENST00000467435	ADM2	Q7Z4H4	148 aa		5.89	□□□□□ -1.47
HDLBP-231	ENST00000467435	KRTAP3-2	Q9BYR7	98 aa		5.89	□□□□□ -1.47
HDLBP-231	ENST00000467435		A0A1B0GU33	70 aa		5.88	□□□□□ -1.47
HDLBP-231	ENST00000467435	LCE2C	Q5TA81	110 aa		5.88	□□□□□ -1.47
HDLBP-231	ENST00000467435	CDC42SE1	Q9NRR8	79 aa		5.88	□□□□□ -1.47
HDLBP-231	ENST00000467435		H0YAA0	97 aa		5.86	□□□□□ -1.47
HDLBP-231	ENST00000467435		A8MU10	97 aa		5.85	□□□□□ -1.47
HDLBP-231	ENST00000467435		P0C880	135 aa		5.85	□□□□□ -1.47
HDLBP-231	ENST00000467435	MIR22HG	Q0VDD5	57 aa		5.85	□□□□□ -1.47
HDLBP-231	ENST00000467435	SPATA8	Q6RVD6	105 aa		5.83	□□□□□ -1.48
HDLBP-231	ENST00000467435	PRO0628	Q9UI54	55 aa		5.83	□□□□□ -1.48
HDLBP-231	ENST00000467435	MUC2	Q02817	5179 aa		5.83	□□□□□ -1.48
HDLBP-231	ENST00000467435	RNF213	Q63HN8	5207 aa		5.81	□□□□□ -1.48
HDLBP-231	ENST00000467435	FLG	P20930	4061 aa	Predicted RBP	5.79	□□□□□ -1.48
HDLBP-231	ENST00000467435	MT1H	P80294	61 aa		5.78	□□□□□ -1.48
HDLBP-231	ENST00000467435	KRTAP13-4	Q3LI77	160 aa		5.75	□□□□□ -1.49
HDLBP-231	ENST00000467435		M0R2T5	61 aa		5.74	□□□□□ -1.49
HDLBP-231	ENST00000467435		M0QZ58	72 aa		5.7	□□□□□ -1.5
HDLBP-231	ENST00000467435	LOR	P23490	312 aa	Predicted RBP	5.67	□□□□□ -1.5
HDLBP-231	ENST00000467435		R4GN34	69 aa		5.67	□□□□□ -1.5
HDLBP-231	ENST00000467435	FAT4	Q6V0I7	4981 aa		5.67	□□□□□ -1.5
HDLBP-231	ENST00000467435		A0A0D9SG42	100 aa		5.66	□□□□□ -1.5
HDLBP-231	ENST00000467435	PMAIP1	Q13794	54 aa		5.6	□□□□□ -1.51
HDLBP-231	ENST00000467435	CRIPT	Q9P021	101 aa		5.6	□□□□□ -1.51
HDLBP-231	ENST00000467435		A6NN06	94 aa		5.59	□□□□□ -1.51
HDLBP-231	ENST00000467435		K7ERS5	55 aa		5.59	□□□□□ -1.51
HDLBP-231	ENST00000467435	LINC01554	Q52M75	96 aa		5.58	□□□□□ -1.52
HDLBP-231	ENST00000467435	MT2A	P02795	61 aa		5.57	□□□□□ -1.52
HDLBP-231	ENST00000467435	KRTAP9-8	Q9BYQ0	159 aa		5.55	□□□□□ -1.52
HDLBP-231	ENST00000467435	MT1F	P04733	61 aa		5.54	□□□□□ -1.52
HDLBP-231	ENST00000467435	KRTAP12-1	P59990	96 aa		5.54	□□□□□ -1.52
HDLBP-231	ENST00000467435	KRTAP12-2	P59991	146 aa		5.53	□□□□□ -1.52
HDLBP-231	ENST00000467435	KRTAP10-10	P60014	251 aa		5.52	□□□□□ -1.53
HDLBP-231	ENST00000467435	SPINT4	Q6UDR6	99 aa		5.52	□□□□□ -1.53
HDLBP-231	ENST00000467435	LCE2A	Q5TA79	106 aa	Predicted RBP	5.5	□□□□□ -1.53
HDLBP-231	ENST00000467435	SPRR2G	Q9BYE4	73 aa		5.46	□□□□□ -1.54
HDLBP-231	ENST00000467435	KRTAP19-1	Q8IUB9	90 aa		5.44	□□□□□ -1.54
HDLBP-231	ENST00000467435	KTN1-AS1	Q86SY8	53 aa		5.41	□□□□□ -1.54
HDLBP-231	ENST00000467435	SVIP	Q8NHG7	77 aa		5.41	□□□□□ -1.54
HDLBP-231	ENST00000467435	ROMO1	P60602	79 aa		5.36	□□□□□ -1.55
HDLBP-231	ENST00000467435	KRTAP9-3	Q9BYQ3	159 aa		5.35	□□□□□ -1.55
HDLBP-231	ENST00000467435	CAMK2N1	Q7Z7J9	78 aa		5.33	□□□□□ -1.56
HDLBP-231	ENST00000467435	KRTAP19-8	Q3LI54	63 aa		5.32	□□□□□ -1.56
HDLBP-231	ENST00000467435	PLAC4	Q8WY50	150 aa		5.31	□□□□□ -1.56
HDLBP-231	ENST00000467435	PRAC1	Q96KF2	57 aa		5.28	□□□□□ -1.56
HDLBP-231	ENST00000467435	MT1B	P07438	61 aa		5.25	□□□□□ -1.57
HDLBP-231	ENST00000467435	C10orf95	Q9H7T3	257 aa		5.23	□□□□□ -1.57
HDLBP-231	ENST00000467435	LCE2B	O14633	110 aa		5.2	□□□□□ -1.58
HDLBP-231	ENST00000467435	KRTAP9-2	Q9BYQ4	174 aa		5.19	□□□□□ -1.58
HDLBP-231	ENST00000467435	KRTAP25-1	Q3LHN0	102 aa		5.13	□□□□□ -1.59
HDLBP-231	ENST00000467435	MT1X	P80297	61 aa		5.09	□□□□□ -1.59
HDLBP-231	ENST00000467435	KRTAP10-5	P60370	271 aa		5.08	□□□□□ -1.6
HDLBP-231	ENST00000467435	TNP1	P09430	55 aa		5.07	□□□□□ -1.6
HDLBP-231	ENST00000467435	LCE2D	Q5TA82	110 aa	Predicted RBP	5.06	□□□□□ -1.6
HDLBP-231	ENST00000467435	PRO2289	Q9P1D8	64 aa		5.03	□□□□□ -1.6
HDLBP-231	ENST00000467435	KRTAP9-6	A0A140TA67	174 aa		4.99	□□□□□ -1.61
HDLBP-231	ENST00000467435	PP632	Q6XCG6	107 aa		4.94	□□□□□ -1.62
HDLBP-231	ENST00000467435	USH2A	O75445	5202 aa		4.93	□□□□□ -1.62
HDLBP-231	ENST00000467435	FSIP2	Q5CZC0	6907 aa		4.92	□□□□□ -1.62
HDLBP-231	ENST00000467435	KRTAP23-1	A1A580	65 aa		4.9	□□□□□ -1.63
HDLBP-231	ENST00000467435	CRCT1	Q9UGL9	99 aa		4.9	□□□□□ -1.63
HDLBP-231	ENST00000467435	KRTAP10-7	P60409	375 aa	Predicted RBP	4.89	□□□□□ -1.63
HDLBP-231	ENST00000467435	KRTAP10-12	P60413	245 aa		4.87	□□□□□ -1.63
HDLBP-231	ENST00000467435	KRTAP19-6	Q3LI70	58 aa		4.87	□□□□□ -1.63
HDLBP-231	ENST00000467435	LCE3A	Q5TA76	89 aa		4.86	□□□□□ -1.63
HDLBP-231	ENST00000467435	SSPO	A2VEC9	5147 aa		4.83	□□□□□ -1.64
HDLBP-231	ENST00000467435	KRTAP8-1	Q8IUC2	63 aa		4.74	□□□□□ -1.65
HDLBP-231	ENST00000467435	KRTAP4-8	A0A0G2JLE6	195 aa		4.67	□□□□□ -1.66
HDLBP-231	ENST00000467435	KRTAP4-8	Q9BYQ9	185 aa		4.67	□□□□□ -1.66
HDLBP-231	ENST00000467435	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.66	□□□□□ -1.66
HDLBP-231	ENST00000467435	KRTAP12-3	P60328	96 aa		4.65	□□□□□ -1.67
HDLBP-231	ENST00000467435	KRTAP19-5	Q3LI72	72 aa		4.62	□□□□□ -1.67
HDLBP-231	ENST00000467435	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.58	□□□□□ -1.68
HDLBP-231	ENST00000467435	KRTAP15-1	Q3LI76	137 aa		4.56	□□□□□ -1.68
HDLBP-231	ENST00000467435	KRTAP19-7	Q3SYF9	63 aa		4.53	□□□□□ -1.68
HDLBP-231	ENST00000467435	KMT2D	O14686	5537 aa		4.52	□□□□□ -1.69
HDLBP-231	ENST00000467435	MACF1	Q9UPN3	7388 aa	Known RBP	4.49	□□□□□ -1.69
HDLBP-231	ENST00000467435	KRTAP9-7	A8MTY7	169 aa		4.49	□□□□□ -1.69
HDLBP-231	ENST00000467435	MT1E	P04732	61 aa		4.46	□□□□□ -1.7
HDLBP-231	ENST00000467435	SYNE2	Q8WXH0	6885 aa	Known RBP	4.41	□□□□□ -1.7
HDLBP-231	ENST00000467435	SPRR5	A0A1B0GTR4	108 aa		4.4	□□□□□ -1.71
HDLBP-231	ENST00000467435	MT1L	Q93083	61 aa		4.38	□□□□□ -1.71
HDLBP-231	ENST00000467435	SPRR2F	Q96RM1	72 aa		4.35	□□□□□ -1.71
HDLBP-231	ENST00000467435	LCE3C	Q5T5A8	94 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms