RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
USP11-205ENST00000467378 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
USP11-205ENST00000467378 KRTAP10-10P60014 251 aa9.21□□□□□ -0.94
USP11-205ENST00000467378 KRTAP6-3Q3LI67 103 aa9.21□□□□□ -0.94
USP11-205ENST00000467378 H3BPC8 53 aa9.18□□□□□ -0.94
USP11-205ENST00000467378 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
USP11-205ENST00000467378 KRTAP19-6Q3LI70 58 aa9.16□□□□□ -0.94
USP11-205ENST00000467378 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
USP11-205ENST00000467378 TRAV7A0A075B6U4 112 aa9.13□□□□□ -0.95
USP11-205ENST00000467378 S4R3F8 94 aa9.1□□□□□ -0.95
USP11-205ENST00000467378 LCA10Q71F78 164 aa9.06□□□□□ -0.96
USP11-205ENST00000467378 NEBP20929 6669 aa9.02□□□□□ -0.97
USP11-205ENST00000467378 A8MUN3 132 aa9□□□□□ -0.97
USP11-205ENST00000467378 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
USP11-205ENST00000467378 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
USP11-205ENST00000467378 SERP2Q8N6R1 65 aa8.97□□□□□ -0.97
USP11-205ENST00000467378 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
USP11-205ENST00000467378 SNURFQ9Y675 71 aa8.91□□□□□ -0.98
USP11-205ENST00000467378 DMAC1Q96GE9 116 aa8.9□□□□□ -0.98
USP11-205ENST00000467378 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
USP11-205ENST00000467378 NDUFC1O43677 76 aa8.86□□□□□ -0.99
USP11-205ENST00000467378 COX7CP15954 63 aa8.81□□□□□ -1
USP11-205ENST00000467378 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
USP11-205ENST00000467378 ACYP2P14621 99 aa8.76□□□□□ -1.01
USP11-205ENST00000467378 SPANXA2-OT1Q8N9U9 137 aa8.74□□□□□ -1.01
USP11-205ENST00000467378 H0YAA0 97 aa8.7□□□□□ -1.02
USP11-205ENST00000467378 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
USP11-205ENST00000467378 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
USP11-205ENST00000467378 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
USP11-205ENST00000467378 H7BZZ5 65 aa8.59□□□□□ -1.03
USP11-205ENST00000467378 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
USP11-205ENST00000467378 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
USP11-205ENST00000467378 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
USP11-205ENST00000467378 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
USP11-205ENST00000467378 A6NN06 94 aa8.52□□□□□ -1.05
USP11-205ENST00000467378 CCDC179H3BU77 68 aa8.52□□□□□ -1.05
USP11-205ENST00000467378 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
USP11-205ENST00000467378 P0C880 135 aa8.48□□□□□ -1.05
USP11-205ENST00000467378 KRTAP19-8Q3LI54 63 aa8.48□□□□□ -1.05
USP11-205ENST00000467378 KRTAP2-3P0C7H8 128 aa8.47□□□□□ -1.05
USP11-205ENST00000467378 KRTAP2-4Q9BYR9 128 aa8.47□□□□□ -1.05
USP11-205ENST00000467378 COA5Q86WW8 74 aa8.46□□□□□ -1.06
USP11-205ENST00000467378 KRTAP5-9P26371 169 aa8.45□□□□□ -1.06
USP11-205ENST00000467378 MT1BP07438 61 aa8.43□□□□□ -1.06
USP11-205ENST00000467378 Q5VV11 94 aa8.41□□□□□ -1.06
USP11-205ENST00000467378 MDN1Q9NU22 5596 aa8.41□□□□□ -1.06
USP11-205ENST00000467378 KMT2DO14686 5537 aa8.38□□□□□ -1.07
USP11-205ENST00000467378 R4GN34 69 aa8.34□□□□□ -1.07
USP11-205ENST00000467378 M0QZ58 72 aa8.3□□□□□ -1.08
USP11-205ENST00000467378 ATP5EP56381 51 aaPredicted RBP8.26□□□□□ -1.09
USP11-205ENST00000467378 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
USP11-205ENST00000467378 TMEM258P61165 79 aa8.19□□□□□ -1.1
USP11-205ENST00000467378 SPRR2EP22531 72 aa8.16□□□□□ -1.1
USP11-205ENST00000467378 SPRR2BP35325 72 aa8.16□□□□□ -1.1
USP11-205ENST00000467378 SPRR2AP35326 72 aa8.16□□□□□ -1.1
USP11-205ENST00000467378 KRTAP2-2Q9BYT5 123 aa8.15□□□□□ -1.1
USP11-205ENST00000467378 KRTAP2-1Q9BYU5 128 aa8.15□□□□□ -1.1
USP11-205ENST00000467378 SEC61GP60059 68 aa8.14□□□□□ -1.11
USP11-205ENST00000467378 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
USP11-205ENST00000467378 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
USP11-205ENST00000467378 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
USP11-205ENST00000467378 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
USP11-205ENST00000467378 SPRR2FQ96RM1 72 aa8.09□□□□□ -1.11
USP11-205ENST00000467378 A0A1B0GU69 56 aa8.01□□□□□ -1.13
USP11-205ENST00000467378 A0A1B0GU33 70 aa8□□□□□ -1.13
USP11-205ENST00000467378 MT1XP80297 61 aa8□□□□□ -1.13
USP11-205ENST00000467378 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
USP11-205ENST00000467378 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
USP11-205ENST00000467378 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
USP11-205ENST00000467378 PCP4P48539 62 aa7.91□□□□□ -1.14
USP11-205ENST00000467378 LCE1AQ5T7P2 110 aa7.9□□□□□ -1.14
USP11-205ENST00000467378 SPRR2DP22532 72 aa7.89□□□□□ -1.15
USP11-205ENST00000467378 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
USP11-205ENST00000467378 A0A0D9SG42 100 aa7.84□□□□□ -1.15
USP11-205ENST00000467378 GPR98Q8WXG9 6306 aa7.84□□□□□ -1.15
USP11-205ENST00000467378 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
USP11-205ENST00000467378 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
USP11-205ENST00000467378 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
USP11-205ENST00000467378 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
USP11-205ENST00000467378 A8MU10 97 aa7.72□□□□□ -1.17
USP11-205ENST00000467378 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
USP11-205ENST00000467378 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
USP11-205ENST00000467378 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
USP11-205ENST00000467378 Q1T7F1 81 aa7.67□□□□□ -1.18
USP11-205ENST00000467378 V9GYY9 64 aa7.67□□□□□ -1.18
USP11-205ENST00000467378 UQCR11O14957 56 aa7.64□□□□□ -1.19
USP11-205ENST00000467378 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
USP11-205ENST00000467378 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
USP11-205ENST00000467378 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
USP11-205ENST00000467378 PSPHP1O15172 72 aa7.58□□□□□ -1.2
USP11-205ENST00000467378 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
USP11-205ENST00000467378 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
USP11-205ENST00000467378 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
USP11-205ENST00000467378 DSTQ03001 7570 aaKnown RBP7.44□□□□□ -1.22
USP11-205ENST00000467378 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
USP11-205ENST00000467378 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
USP11-205ENST00000467378 A6NED7 52 aa7.33□□□□□ -1.24
USP11-205ENST00000467378 K7ERS5 55 aa7.24□□□□□ -1.25
USP11-205ENST00000467378 TNP1P09430 55 aa7.24□□□□□ -1.25
USP11-205ENST00000467378 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms