RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
UBE4B-206ENST00000466379 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
UBE4B-206ENST00000466379 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-206ENST00000466379 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
UBE4B-206ENST00000466379 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
UBE4B-206ENST00000466379 LPAP08519 4548 aa7.09□□□□□ -1.27
UBE4B-206ENST00000466379 HERC2O95714 4834 aa7.08□□□□□ -1.28
UBE4B-206ENST00000466379 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
UBE4B-206ENST00000466379 LRP2P98164 4655 aa7.06□□□□□ -1.28
UBE4B-206ENST00000466379 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
UBE4B-206ENST00000466379 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
UBE4B-206ENST00000466379 A8MU10 97 aa7.01□□□□□ -1.29
UBE4B-206ENST00000466379 A6NED7 52 aa6.99□□□□□ -1.29
UBE4B-206ENST00000466379 A0A1B0GU69 56 aa6.98□□□□□ -1.29
UBE4B-206ENST00000466379 ADM2Q7Z4H4 148 aa6.93□□□□□ -1.3
UBE4B-206ENST00000466379 A6NN06 94 aa6.92□□□□□ -1.3
UBE4B-206ENST00000466379 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
UBE4B-206ENST00000466379 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
UBE4B-206ENST00000466379 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
UBE4B-206ENST00000466379 S4R3F8 94 aa6.81□□□□□ -1.32
UBE4B-206ENST00000466379 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
UBE4B-206ENST00000466379 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
UBE4B-206ENST00000466379 UQCR11O14957 56 aa6.78□□□□□ -1.32
UBE4B-206ENST00000466379 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
UBE4B-206ENST00000466379 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
UBE4B-206ENST00000466379 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
UBE4B-206ENST00000466379 HERC1Q15751 4861 aa6.75□□□□□ -1.33
UBE4B-206ENST00000466379 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
UBE4B-206ENST00000466379 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
UBE4B-206ENST00000466379 A0A1B0GU33 70 aa6.69□□□□□ -1.34
UBE4B-206ENST00000466379 H0YAA0 97 aa6.67□□□□□ -1.34
UBE4B-206ENST00000466379 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
UBE4B-206ENST00000466379 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-206ENST00000466379 P0C880 135 aa6.6□□□□□ -1.35
UBE4B-206ENST00000466379 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
UBE4B-206ENST00000466379 MUC2Q02817 5179 aa6.58□□□□□ -1.36
UBE4B-206ENST00000466379 ROMO1P60602 79 aa6.57□□□□□ -1.36
UBE4B-206ENST00000466379 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
UBE4B-206ENST00000466379 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
UBE4B-206ENST00000466379 K7ERS5 55 aa6.55□□□□□ -1.36
UBE4B-206ENST00000466379 A0A0D9SG42 100 aa6.47□□□□□ -1.37
UBE4B-206ENST00000466379 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
UBE4B-206ENST00000466379 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-206ENST00000466379 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
UBE4B-206ENST00000466379 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
UBE4B-206ENST00000466379 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-206ENST00000466379 LCE2BO14633 110 aa6.34□□□□□ -1.39
UBE4B-206ENST00000466379 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
UBE4B-206ENST00000466379 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
UBE4B-206ENST00000466379 M0QZ58 72 aa6.32□□□□□ -1.4
UBE4B-206ENST00000466379 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
UBE4B-206ENST00000466379 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
UBE4B-206ENST00000466379 R4GN34 69 aa6.29□□□□□ -1.4
UBE4B-206ENST00000466379 SPINT4Q6UDR6 99 aa6.27□□□□□ -1.41
UBE4B-206ENST00000466379 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
UBE4B-206ENST00000466379 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
UBE4B-206ENST00000466379 MT1HP80294 61 aa6.18□□□□□ -1.42
UBE4B-206ENST00000466379 M0R2T5 61 aa6.16□□□□□ -1.42
UBE4B-206ENST00000466379 CRIPTQ9P021 101 aa6.15□□□□□ -1.43
UBE4B-206ENST00000466379 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
UBE4B-206ENST00000466379 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
UBE4B-206ENST00000466379 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
UBE4B-206ENST00000466379 MT2AP02795 61 aa5.99□□□□□ -1.45
UBE4B-206ENST00000466379 MT1FP04733 61 aa5.99□□□□□ -1.45
UBE4B-206ENST00000466379 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
UBE4B-206ENST00000466379 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
UBE4B-206ENST00000466379 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
UBE4B-206ENST00000466379 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
UBE4B-206ENST00000466379 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
UBE4B-206ENST00000466379 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
UBE4B-206ENST00000466379 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
UBE4B-206ENST00000466379 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
UBE4B-206ENST00000466379 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
UBE4B-206ENST00000466379 MT1BP07438 61 aa5.7□□□□□ -1.5
UBE4B-206ENST00000466379 TNP1P09430 55 aa5.64□□□□□ -1.51
UBE4B-206ENST00000466379 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
UBE4B-206ENST00000466379 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
UBE4B-206ENST00000466379 MT1XP80297 61 aa5.57□□□□□ -1.52
UBE4B-206ENST00000466379 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
UBE4B-206ENST00000466379 USH2AO75445 5202 aa5.46□□□□□ -1.54
UBE4B-206ENST00000466379 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
UBE4B-206ENST00000466379 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.55
UBE4B-206ENST00000466379 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
UBE4B-206ENST00000466379 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
UBE4B-206ENST00000466379 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
UBE4B-206ENST00000466379 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
UBE4B-206ENST00000466379 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
UBE4B-206ENST00000466379 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
UBE4B-206ENST00000466379 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
UBE4B-206ENST00000466379 KMT2DO14686 5537 aa5.19□□□□□ -1.58
UBE4B-206ENST00000466379 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
UBE4B-206ENST00000466379 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
UBE4B-206ENST00000466379 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
UBE4B-206ENST00000466379 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
UBE4B-206ENST00000466379 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
UBE4B-206ENST00000466379 INE1O15225 51 aa5.08□□□□□ -1.6
UBE4B-206ENST00000466379 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
UBE4B-206ENST00000466379 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
UBE4B-206ENST00000466379 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
UBE4B-206ENST00000466379 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms