RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 J3QL48 77 aa5.26□□□□□ -1.57
MSH5-211ENST00000463144 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
MSH5-211ENST00000463144 A6NED7 52 aa5.25□□□□□ -1.57
MSH5-211ENST00000463144 LCA10Q71F78 164 aa5.25□□□□□ -1.57
MSH5-211ENST00000463144 A0A1B0GU69 56 aa5.24□□□□□ -1.57
MSH5-211ENST00000463144 H3BS24 57 aa5.2□□□□□ -1.58
MSH5-211ENST00000463144 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
MSH5-211ENST00000463144 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
MSH5-211ENST00000463144 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
MSH5-211ENST00000463144 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
MSH5-211ENST00000463144 HERC1Q15751 4861 aa5.13□□□□□ -1.59
MSH5-211ENST00000463144 UQCR11O14957 56 aa5.11□□□□□ -1.59
MSH5-211ENST00000463144 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
MSH5-211ENST00000463144 S4R3F8 94 aa5.09□□□□□ -1.59
MSH5-211ENST00000463144 MIR22HGQ0VDD5 57 aa5.08□□□□□ -1.6
MSH5-211ENST00000463144 H1FX-AS1Q4G0G2 97 aa5.08□□□□□ -1.6
MSH5-211ENST00000463144 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
MSH5-211ENST00000463144 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
MSH5-211ENST00000463144 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
MSH5-211ENST00000463144 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
MSH5-211ENST00000463144 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
MSH5-211ENST00000463144 A0A1B0GU33 70 aa5.04□□□□□ -1.6
MSH5-211ENST00000463144 A6NN06 94 aa5.03□□□□□ -1.6
MSH5-211ENST00000463144 H0YAA0 97 aa5.02□□□□□ -1.61
MSH5-211ENST00000463144 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
MSH5-211ENST00000463144 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
MSH5-211ENST00000463144 P0C880 135 aa4.95□□□□□ -1.62
MSH5-211ENST00000463144 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
MSH5-211ENST00000463144 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
MSH5-211ENST00000463144 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
MSH5-211ENST00000463144 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
MSH5-211ENST00000463144 MUC2Q02817 5179 aa4.91□□□□□ -1.62
MSH5-211ENST00000463144 A0A0D9SG42 100 aa4.82□□□□□ -1.64
MSH5-211ENST00000463144 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
MSH5-211ENST00000463144 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
MSH5-211ENST00000463144 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
MSH5-211ENST00000463144 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
MSH5-211ENST00000463144 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
MSH5-211ENST00000463144 M0QZ58 72 aa4.76□□□□□ -1.65
MSH5-211ENST00000463144 K7ERS5 55 aa4.75□□□□□ -1.65
MSH5-211ENST00000463144 RNF213Q63HN8 5207 aa4.75□□□□□ -1.65
MSH5-211ENST00000463144 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
MSH5-211ENST00000463144 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
MSH5-211ENST00000463144 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
MSH5-211ENST00000463144 A0A0A0MQY5 61 aa4.71□□□□□ -1.65
MSH5-211ENST00000463144 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
MSH5-211ENST00000463144 R4GN34 69 aa4.7□□□□□ -1.66
MSH5-211ENST00000463144 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
MSH5-211ENST00000463144 ROMO1P60602 79 aa4.65□□□□□ -1.67
MSH5-211ENST00000463144 MT1HP80294 61 aa4.6□□□□□ -1.67
MSH5-211ENST00000463144 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
MSH5-211ENST00000463144 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
MSH5-211ENST00000463144 M0R2T5 61 aa4.53□□□□□ -1.68
MSH5-211ENST00000463144 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
MSH5-211ENST00000463144 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
MSH5-211ENST00000463144 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
MSH5-211ENST00000463144 MT2AP02795 61 aa4.47□□□□□ -1.69
MSH5-211ENST00000463144 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
MSH5-211ENST00000463144 MT1FP04733 61 aa4.46□□□□□ -1.7
MSH5-211ENST00000463144 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
MSH5-211ENST00000463144 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
MSH5-211ENST00000463144 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
MSH5-211ENST00000463144 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
MSH5-211ENST00000463144 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
MSH5-211ENST00000463144 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
MSH5-211ENST00000463144 MT1BP07438 61 aa4.28□□□□□ -1.72
MSH5-211ENST00000463144 TNP1P09430 55 aa4.23□□□□□ -1.73
MSH5-211ENST00000463144 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
MSH5-211ENST00000463144 LCE2DQ5TA82 110 aaPredicted RBP4.2□□□□□ -1.74
MSH5-211ENST00000463144 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
MSH5-211ENST00000463144 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
MSH5-211ENST00000463144 MT1XP80297 61 aa4.18□□□□□ -1.74
MSH5-211ENST00000463144 LCE2BO14633 110 aa4.17□□□□□ -1.74
MSH5-211ENST00000463144 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
MSH5-211ENST00000463144 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
MSH5-211ENST00000463144 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
MSH5-211ENST00000463144 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
MSH5-211ENST00000463144 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
MSH5-211ENST00000463144 USH2AO75445 5202 aa4.07□□□□□ -1.76
MSH5-211ENST00000463144 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
MSH5-211ENST00000463144 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
MSH5-211ENST00000463144 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
MSH5-211ENST00000463144 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
MSH5-211ENST00000463144 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
MSH5-211ENST00000463144 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
MSH5-211ENST00000463144 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
MSH5-211ENST00000463144 KMT2DO14686 5537 aa3.88□□□□□ -1.79
MSH5-211ENST00000463144 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
MSH5-211ENST00000463144 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
MSH5-211ENST00000463144 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
MSH5-211ENST00000463144 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
MSH5-211ENST00000463144 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
MSH5-211ENST00000463144 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
MSH5-211ENST00000463144 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
MSH5-211ENST00000463144 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
MSH5-211ENST00000463144 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
MSH5-211ENST00000463144 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
MSH5-211ENST00000463144 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
MSH5-211ENST00000463144 MT1EP04732 61 aa3.63□□□□□ -1.83
MSH5-211ENST00000463144 MT1LQ93083 61 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms