RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 KTN1-AS1Q86SY8 53 aa9.73□□□□□ -0.85
ATPAF2-202ENST00000462733 C7orf65Q6ZTY9 151 aa9.73□□□□□ -0.85
ATPAF2-202ENST00000462733 SPINK7P58062 85 aa9.69□□□□□ -0.86
ATPAF2-202ENST00000462733 SPTSSBQ8NFR3 76 aa9.68□□□□□ -0.86
ATPAF2-202ENST00000462733 A6NN06 94 aa9.66□□□□□ -0.86
ATPAF2-202ENST00000462733 A0A1B0GU69 56 aa9.65□□□□□ -0.87
ATPAF2-202ENST00000462733 C20orf166-AS1Q96NR2 134 aa9.65□□□□□ -0.87
ATPAF2-202ENST00000462733 A8MUU9 505 aa9.64□□□□□ -0.87
ATPAF2-202ENST00000462733 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
ATPAF2-202ENST00000462733 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
ATPAF2-202ENST00000462733 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
ATPAF2-202ENST00000462733 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
ATPAF2-202ENST00000462733 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
ATPAF2-202ENST00000462733 UQCR11O14957 56 aa9.49□□□□□ -0.89
ATPAF2-202ENST00000462733 MIR22HGQ0VDD5 57 aa9.42□□□□□ -0.9
ATPAF2-202ENST00000462733 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
ATPAF2-202ENST00000462733 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
ATPAF2-202ENST00000462733 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
ATPAF2-202ENST00000462733 MUC2Q02817 5179 aa9.35□□□□□ -0.91
ATPAF2-202ENST00000462733 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
ATPAF2-202ENST00000462733 COX6B2Q6YFQ2 88 aa9.3□□□□□ -0.92
ATPAF2-202ENST00000462733 A0A1B0GU33 70 aa9.14□□□□□ -0.95
ATPAF2-202ENST00000462733 H1FX-AS1Q4G0G2 97 aa9.14□□□□□ -0.95
ATPAF2-202ENST00000462733 H0YAA0 97 aa9.12□□□□□ -0.95
ATPAF2-202ENST00000462733 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
ATPAF2-202ENST00000462733 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
ATPAF2-202ENST00000462733 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
ATPAF2-202ENST00000462733 LINC01554Q52M75 96 aa9□□□□□ -0.97
ATPAF2-202ENST00000462733 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
ATPAF2-202ENST00000462733 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
ATPAF2-202ENST00000462733 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
ATPAF2-202ENST00000462733 S4R3F8 94 aa8.96□□□□□ -0.98
ATPAF2-202ENST00000462733 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
ATPAF2-202ENST00000462733 K7ERS5 55 aa8.91□□□□□ -0.98
ATPAF2-202ENST00000462733 KRTAP10-6P60371 365 aaPredicted RBP8.87□□□□□ -0.99
ATPAF2-202ENST00000462733 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
ATPAF2-202ENST00000462733 MT1HP80294 61 aa8.84□□□□□ -0.99
ATPAF2-202ENST00000462733 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
ATPAF2-202ENST00000462733 M0R2T5 61 aa8.77□□□□□ -1.01
ATPAF2-202ENST00000462733 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
ATPAF2-202ENST00000462733 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
ATPAF2-202ENST00000462733 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
ATPAF2-202ENST00000462733 P0C880 135 aa8.66□□□□□ -1.02
ATPAF2-202ENST00000462733 ROMO1P60602 79 aa8.64□□□□□ -1.03
ATPAF2-202ENST00000462733 A0A0D9SG42 100 aa8.59□□□□□ -1.03
ATPAF2-202ENST00000462733 M0QZ58 72 aa8.56□□□□□ -1.04
ATPAF2-202ENST00000462733 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
ATPAF2-202ENST00000462733 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
ATPAF2-202ENST00000462733 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
ATPAF2-202ENST00000462733 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
ATPAF2-202ENST00000462733 MT2AP02795 61 aa8.4□□□□□ -1.07
ATPAF2-202ENST00000462733 MT1FP04733 61 aa8.34□□□□□ -1.07
ATPAF2-202ENST00000462733 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
ATPAF2-202ENST00000462733 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
ATPAF2-202ENST00000462733 KRTAP10-10P60014 251 aa8.34□□□□□ -1.07
ATPAF2-202ENST00000462733 R4GN34 69 aa8.27□□□□□ -1.09
ATPAF2-202ENST00000462733 H3BS24 57 aa8.23□□□□□ -1.09
ATPAF2-202ENST00000462733 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
ATPAF2-202ENST00000462733 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
ATPAF2-202ENST00000462733 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
ATPAF2-202ENST00000462733 KRTAP19-1Q8IUB9 90 aa8.03□□□□□ -1.12
ATPAF2-202ENST00000462733 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
ATPAF2-202ENST00000462733 LCE2BO14633 110 aa8□□□□□ -1.13
ATPAF2-202ENST00000462733 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
ATPAF2-202ENST00000462733 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
ATPAF2-202ENST00000462733 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
ATPAF2-202ENST00000462733 USH2AO75445 5202 aa7.91□□□□□ -1.14
ATPAF2-202ENST00000462733 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
ATPAF2-202ENST00000462733 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
ATPAF2-202ENST00000462733 MT1BP07438 61 aa7.8□□□□□ -1.16
ATPAF2-202ENST00000462733 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
ATPAF2-202ENST00000462733 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
ATPAF2-202ENST00000462733 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
ATPAF2-202ENST00000462733 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
ATPAF2-202ENST00000462733 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
ATPAF2-202ENST00000462733 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
ATPAF2-202ENST00000462733 TNP1P09430 55 aa7.59□□□□□ -1.19
ATPAF2-202ENST00000462733 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
ATPAF2-202ENST00000462733 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
ATPAF2-202ENST00000462733 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
ATPAF2-202ENST00000462733 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
ATPAF2-202ENST00000462733 MT1XP80297 61 aa7.46□□□□□ -1.22
ATPAF2-202ENST00000462733 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
ATPAF2-202ENST00000462733 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
ATPAF2-202ENST00000462733 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
ATPAF2-202ENST00000462733 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
ATPAF2-202ENST00000462733 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
ATPAF2-202ENST00000462733 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
ATPAF2-202ENST00000462733 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
ATPAF2-202ENST00000462733 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
ATPAF2-202ENST00000462733 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
ATPAF2-202ENST00000462733 KMT2DO14686 5537 aa7.08□□□□□ -1.28
ATPAF2-202ENST00000462733 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
ATPAF2-202ENST00000462733 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
ATPAF2-202ENST00000462733 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
ATPAF2-202ENST00000462733 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
ATPAF2-202ENST00000462733 KRTAP9-7A8MTY7 169 aa6.87□□□□□ -1.31
ATPAF2-202ENST00000462733 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
ATPAF2-202ENST00000462733 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
ATPAF2-202ENST00000462733 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms