RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
COL9A3-203ENST00000462700 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
COL9A3-203ENST00000462700 FCGBPQ9Y6R7 5405 aaPredicted RBP8.65□□□□□ -1.02
COL9A3-203ENST00000462700 MP68P56378 58 aa8.63□□□□□ -1.03
COL9A3-203ENST00000462700 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
COL9A3-203ENST00000462700 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
COL9A3-203ENST00000462700 A8MUN3 132 aa8.56□□□□□ -1.04
COL9A3-203ENST00000462700 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
COL9A3-203ENST00000462700 LCE3BQ5TA77 95 aa8.54□□□□□ -1.04
COL9A3-203ENST00000462700 H3BPC8 53 aa8.53□□□□□ -1.04
COL9A3-203ENST00000462700 K7ERU9 68 aa8.51□□□□□ -1.05
COL9A3-203ENST00000462700 NDUFC1O43677 76 aa8.51□□□□□ -1.05
COL9A3-203ENST00000462700 KRTAP4-12Q9BQ66 201 aa8.51□□□□□ -1.05
COL9A3-203ENST00000462700 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
COL9A3-203ENST00000462700 SPRR2GQ9BYE4 73 aa8.49□□□□□ -1.05
COL9A3-203ENST00000462700 MT-ATP8P03928 68 aa8.48□□□□□ -1.05
COL9A3-203ENST00000462700 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
COL9A3-203ENST00000462700 H0YAA0 97 aa8.42□□□□□ -1.06
COL9A3-203ENST00000462700 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
COL9A3-203ENST00000462700 MT1BP07438 61 aa8.41□□□□□ -1.06
COL9A3-203ENST00000462700 Q5VV11 94 aa8.41□□□□□ -1.06
COL9A3-203ENST00000462700 CRIPTQ9P021 101 aa8.4□□□□□ -1.06
COL9A3-203ENST00000462700 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
COL9A3-203ENST00000462700 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
COL9A3-203ENST00000462700 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
COL9A3-203ENST00000462700 KRTAP9-9Q9BYP9 154 aa8.34□□□□□ -1.07
COL9A3-203ENST00000462700 KRTAP9-4Q9BYQ2 154 aa8.34□□□□□ -1.07
COL9A3-203ENST00000462700 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
COL9A3-203ENST00000462700 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
COL9A3-203ENST00000462700 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
COL9A3-203ENST00000462700 A6NN06 94 aa8.25□□□□□ -1.09
COL9A3-203ENST00000462700 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
COL9A3-203ENST00000462700 ACYP2P14621 99 aa8.18□□□□□ -1.1
COL9A3-203ENST00000462700 P0C880 135 aa8.16□□□□□ -1.1
COL9A3-203ENST00000462700 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
COL9A3-203ENST00000462700 SYNE2Q8WXH0 6885 aaKnown RBP8.15□□□□□ -1.1
COL9A3-203ENST00000462700 C20orf197Q8N268 126 aa8.14□□□□□ -1.11
COL9A3-203ENST00000462700 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
COL9A3-203ENST00000462700 R4GN34 69 aa8.1□□□□□ -1.11
COL9A3-203ENST00000462700 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
COL9A3-203ENST00000462700 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
COL9A3-203ENST00000462700 M0QZ58 72 aa8.05□□□□□ -1.12
COL9A3-203ENST00000462700 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
COL9A3-203ENST00000462700 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
COL9A3-203ENST00000462700 LCE1DQ5T752 114 aa8□□□□□ -1.13
COL9A3-203ENST00000462700 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
COL9A3-203ENST00000462700 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
COL9A3-203ENST00000462700 MT1XP80297 61 aa7.92□□□□□ -1.14
COL9A3-203ENST00000462700 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
COL9A3-203ENST00000462700 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
COL9A3-203ENST00000462700 COX7CP15954 63 aa7.89□□□□□ -1.15
COL9A3-203ENST00000462700 COA5Q86WW8 74 aa7.81□□□□□ -1.16
COL9A3-203ENST00000462700 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
COL9A3-203ENST00000462700 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
COL9A3-203ENST00000462700 MUC12Q9UKN1 5478 aa7.77□□□□□ -1.17
COL9A3-203ENST00000462700 H7BZZ5 65 aa7.76□□□□□ -1.17
COL9A3-203ENST00000462700 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
COL9A3-203ENST00000462700 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
COL9A3-203ENST00000462700 KMT2DO14686 5537 aa7.7□□□□□ -1.18
COL9A3-203ENST00000462700 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
COL9A3-203ENST00000462700 ANAPC13Q9BS18 74 aa7.67□□□□□ -1.18
COL9A3-203ENST00000462700 NEBP20929 6669 aa7.67□□□□□ -1.18
COL9A3-203ENST00000462700 KRTAP4-2Q9BYR5 136 aa7.64□□□□□ -1.19
COL9A3-203ENST00000462700 SEC61GP60059 68 aa7.61□□□□□ -1.19
COL9A3-203ENST00000462700 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
COL9A3-203ENST00000462700 MDN1Q9NU22 5596 aa7.59□□□□□ -1.19
COL9A3-203ENST00000462700 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
COL9A3-203ENST00000462700 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
COL9A3-203ENST00000462700 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
COL9A3-203ENST00000462700 CCDC179H3BU77 68 aa7.52□□□□□ -1.21
COL9A3-203ENST00000462700 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
COL9A3-203ENST00000462700 A0A1B0GU33 70 aa7.47□□□□□ -1.21
COL9A3-203ENST00000462700 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
COL9A3-203ENST00000462700 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
COL9A3-203ENST00000462700 KRTAP4-11Q9BYQ6 195 aa7.47□□□□□ -1.21
COL9A3-203ENST00000462700 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
COL9A3-203ENST00000462700 A0A0D9SG42 100 aa7.45□□□□□ -1.22
COL9A3-203ENST00000462700 SPRR2EP22531 72 aa7.43□□□□□ -1.22
COL9A3-203ENST00000462700 SPRR2BP35325 72 aa7.43□□□□□ -1.22
COL9A3-203ENST00000462700 SPRR2AP35326 72 aa7.43□□□□□ -1.22
COL9A3-203ENST00000462700 KRTAP20-1Q3LI63 56 aa7.41□□□□□ -1.22
COL9A3-203ENST00000462700 A0A1B0GU69 56 aa7.4□□□□□ -1.22
COL9A3-203ENST00000462700 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
COL9A3-203ENST00000462700 LCE1AQ5T7P2 110 aa7.35□□□□□ -1.23
COL9A3-203ENST00000462700 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
COL9A3-203ENST00000462700 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
COL9A3-203ENST00000462700 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
COL9A3-203ENST00000462700 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
COL9A3-203ENST00000462700 KRTAP2-3P0C7H8 128 aa7.25□□□□□ -1.25
COL9A3-203ENST00000462700 TMEM258P61165 79 aa7.25□□□□□ -1.25
COL9A3-203ENST00000462700 KRTAP2-4Q9BYR9 128 aa7.25□□□□□ -1.25
COL9A3-203ENST00000462700 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
COL9A3-203ENST00000462700 A8MU10 97 aa7.21□□□□□ -1.26
COL9A3-203ENST00000462700 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
COL9A3-203ENST00000462700 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
COL9A3-203ENST00000462700 SPRR2DP22532 72 aa7.18□□□□□ -1.26
COL9A3-203ENST00000462700 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
COL9A3-203ENST00000462700 KRTAP2-2Q9BYT5 123 aa7.04□□□□□ -1.28
COL9A3-203ENST00000462700 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
COL9A3-203ENST00000462700 MT1EP04732 61 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms