RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
RAE1-207ENST00000462438 A8MUU9 505 aa6.74□□□□□ -1.33
RAE1-207ENST00000462438 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
RAE1-207ENST00000462438 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
RAE1-207ENST00000462438 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
RAE1-207ENST00000462438 ACYP2P14621 99 aa6.7□□□□□ -1.34
RAE1-207ENST00000462438 A0A1B0GVX0 72 aa6.68□□□□□ -1.34
RAE1-207ENST00000462438 Q5W150 140 aa6.68□□□□□ -1.34
RAE1-207ENST00000462438 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
RAE1-207ENST00000462438 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
RAE1-207ENST00000462438 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
RAE1-207ENST00000462438 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
RAE1-207ENST00000462438 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
RAE1-207ENST00000462438 MRPL34Q9BQ48 92 aaKnown RBP6.59□□□□□ -1.35
RAE1-207ENST00000462438 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
RAE1-207ENST00000462438 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
RAE1-207ENST00000462438 XP32Q5T750 250 aa6.57□□□□□ -1.36
RAE1-207ENST00000462438 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
RAE1-207ENST00000462438 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
RAE1-207ENST00000462438 HERC1Q15751 4861 aa6.54□□□□□ -1.36
RAE1-207ENST00000462438 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
RAE1-207ENST00000462438 IGKV2-30P06310 120 aa6.54□□□□□ -1.36
RAE1-207ENST00000462438 RPL37P61927 97 aaKnown RBP6.5□□□□□ -1.37
RAE1-207ENST00000462438 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
RAE1-207ENST00000462438 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
RAE1-207ENST00000462438 H0YAA0 97 aa6.47□□□□□ -1.37
RAE1-207ENST00000462438 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
RAE1-207ENST00000462438 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
RAE1-207ENST00000462438 LPAP08519 4548 aa6.41□□□□□ -1.38
RAE1-207ENST00000462438 LRP2P98164 4655 aa6.37□□□□□ -1.39
RAE1-207ENST00000462438 A0A0D9SG42 100 aa6.33□□□□□ -1.4
RAE1-207ENST00000462438 A0A1B0GU33 70 aa6.32□□□□□ -1.4
RAE1-207ENST00000462438 K7ERS5 55 aa6.3□□□□□ -1.4
RAE1-207ENST00000462438 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
RAE1-207ENST00000462438 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
RAE1-207ENST00000462438 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
RAE1-207ENST00000462438 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
RAE1-207ENST00000462438 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
RAE1-207ENST00000462438 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
RAE1-207ENST00000462438 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
RAE1-207ENST00000462438 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
RAE1-207ENST00000462438 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
RAE1-207ENST00000462438 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
RAE1-207ENST00000462438 MUC2Q02817 5179 aa5.95□□□□□ -1.46
RAE1-207ENST00000462438 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
RAE1-207ENST00000462438 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
RAE1-207ENST00000462438 MT1HP80294 61 aa5.88□□□□□ -1.47
RAE1-207ENST00000462438 S4R3F8 94 aa5.87□□□□□ -1.47
RAE1-207ENST00000462438 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
RAE1-207ENST00000462438 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
RAE1-207ENST00000462438 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
RAE1-207ENST00000462438 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
RAE1-207ENST00000462438 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
RAE1-207ENST00000462438 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
RAE1-207ENST00000462438 M0R2T5 61 aa5.69□□□□□ -1.5
RAE1-207ENST00000462438 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
RAE1-207ENST00000462438 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
RAE1-207ENST00000462438 MT2AP02795 61 aa5.6□□□□□ -1.51
RAE1-207ENST00000462438 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
RAE1-207ENST00000462438 MT1FP04733 61 aa5.54□□□□□ -1.52
RAE1-207ENST00000462438 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
RAE1-207ENST00000462438 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
RAE1-207ENST00000462438 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
RAE1-207ENST00000462438 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
RAE1-207ENST00000462438 M0QZ58 72 aa5.45□□□□□ -1.54
RAE1-207ENST00000462438 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
RAE1-207ENST00000462438 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
RAE1-207ENST00000462438 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
RAE1-207ENST00000462438 R4GN34 69 aa5.36□□□□□ -1.55
RAE1-207ENST00000462438 LCE2BO14633 110 aa5.29□□□□□ -1.56
RAE1-207ENST00000462438 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
RAE1-207ENST00000462438 MT1BP07438 61 aa5.24□□□□□ -1.57
RAE1-207ENST00000462438 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
RAE1-207ENST00000462438 USH2AO75445 5202 aa5.19□□□□□ -1.58
RAE1-207ENST00000462438 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
RAE1-207ENST00000462438 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
RAE1-207ENST00000462438 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
RAE1-207ENST00000462438 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
RAE1-207ENST00000462438 MT1XP80297 61 aa5.01□□□□□ -1.61
RAE1-207ENST00000462438 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
RAE1-207ENST00000462438 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
RAE1-207ENST00000462438 INE1O15225 51 aa4.88□□□□□ -1.63
RAE1-207ENST00000462438 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
RAE1-207ENST00000462438 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
RAE1-207ENST00000462438 TNP1P09430 55 aa4.83□□□□□ -1.64
RAE1-207ENST00000462438 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
RAE1-207ENST00000462438 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
RAE1-207ENST00000462438 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
RAE1-207ENST00000462438 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
RAE1-207ENST00000462438 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
RAE1-207ENST00000462438 KRTAP5-9P26371 169 aa4.59□□□□□ -1.68
RAE1-207ENST00000462438 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.68
RAE1-207ENST00000462438 LCE3AQ5TA76 89 aa4.59□□□□□ -1.68
RAE1-207ENST00000462438 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
RAE1-207ENST00000462438 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
RAE1-207ENST00000462438 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
RAE1-207ENST00000462438 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
RAE1-207ENST00000462438 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
RAE1-207ENST00000462438 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
RAE1-207ENST00000462438 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms