RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
PDZRN3-203ENST00000462146 TNXBP22105 4242 aa6.08□□□□□ -1.44
PDZRN3-203ENST00000462146 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
PDZRN3-203ENST00000462146 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
PDZRN3-203ENST00000462146 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
PDZRN3-203ENST00000462146 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
PDZRN3-203ENST00000462146 MYCBP2O75592 4640 aa6.05□□□□□ -1.44
PDZRN3-203ENST00000462146 EPPK1P58107 5090 aaKnown RBP6.05□□□□□ -1.44
PDZRN3-203ENST00000462146 A0A0D9SG42 100 aa6.04□□□□□ -1.44
PDZRN3-203ENST00000462146 K7ERS5 55 aa6.04□□□□□ -1.44
PDZRN3-203ENST00000462146 ROMO1P60602 79 aa6.04□□□□□ -1.44
PDZRN3-203ENST00000462146 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
PDZRN3-203ENST00000462146 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
PDZRN3-203ENST00000462146 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
PDZRN3-203ENST00000462146 P0C880 135 aa5.95□□□□□ -1.46
PDZRN3-203ENST00000462146 LPAP08519 4548 aa5.95□□□□□ -1.46
PDZRN3-203ENST00000462146 S4R3F8 94 aa5.95□□□□□ -1.46
PDZRN3-203ENST00000462146 RYR1P21817 5038 aa5.94□□□□□ -1.46
PDZRN3-203ENST00000462146 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
PDZRN3-203ENST00000462146 XP32Q5T750 250 aa5.93□□□□□ -1.46
PDZRN3-203ENST00000462146 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
PDZRN3-203ENST00000462146 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
PDZRN3-203ENST00000462146 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
PDZRN3-203ENST00000462146 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
PDZRN3-203ENST00000462146 Q5VSD8 79 aa5.84□□□□□ -1.47
PDZRN3-203ENST00000462146 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
PDZRN3-203ENST00000462146 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
PDZRN3-203ENST00000462146 LRP2P98164 4655 aa5.81□□□□□ -1.48
PDZRN3-203ENST00000462146 HERC2O95714 4834 aa5.79□□□□□ -1.48
PDZRN3-203ENST00000462146 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
PDZRN3-203ENST00000462146 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
PDZRN3-203ENST00000462146 MT1HL1P0DM35 61 aa5.71□□□□□ -1.49
PDZRN3-203ENST00000462146 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
PDZRN3-203ENST00000462146 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
PDZRN3-203ENST00000462146 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
PDZRN3-203ENST00000462146 M0QZ58 72 aa5.63□□□□□ -1.51
PDZRN3-203ENST00000462146 PCLOQ9Y6V0 5065 aa5.59□□□□□ -1.51
PDZRN3-203ENST00000462146 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
PDZRN3-203ENST00000462146 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
PDZRN3-203ENST00000462146 R4GN34 69 aa5.53□□□□□ -1.52
PDZRN3-203ENST00000462146 J3QL48 77 aa5.52□□□□□ -1.53
PDZRN3-203ENST00000462146 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
PDZRN3-203ENST00000462146 HERC1Q15751 4861 aa5.39□□□□□ -1.55
PDZRN3-203ENST00000462146 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
PDZRN3-203ENST00000462146 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.56
PDZRN3-203ENST00000462146 MUC2Q02817 5179 aa5.32□□□□□ -1.56
PDZRN3-203ENST00000462146 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
PDZRN3-203ENST00000462146 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
PDZRN3-203ENST00000462146 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
PDZRN3-203ENST00000462146 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
PDZRN3-203ENST00000462146 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
PDZRN3-203ENST00000462146 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
PDZRN3-203ENST00000462146 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
PDZRN3-203ENST00000462146 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
PDZRN3-203ENST00000462146 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
PDZRN3-203ENST00000462146 TNP1P09430 55 aa5.06□□□□□ -1.6
PDZRN3-203ENST00000462146 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
PDZRN3-203ENST00000462146 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
PDZRN3-203ENST00000462146 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
PDZRN3-203ENST00000462146 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
PDZRN3-203ENST00000462146 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
PDZRN3-203ENST00000462146 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
PDZRN3-203ENST00000462146 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
PDZRN3-203ENST00000462146 M0R2T5 61 aa4.81□□□□□ -1.64
PDZRN3-203ENST00000462146 MT1FP04733 61 aa4.77□□□□□ -1.65
PDZRN3-203ENST00000462146 MT1HP80294 61 aa4.77□□□□□ -1.65
PDZRN3-203ENST00000462146 MT2AP02795 61 aa4.74□□□□□ -1.65
PDZRN3-203ENST00000462146 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
PDZRN3-203ENST00000462146 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
PDZRN3-203ENST00000462146 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
PDZRN3-203ENST00000462146 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
PDZRN3-203ENST00000462146 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
PDZRN3-203ENST00000462146 MT1XP80297 61 aa4.64□□□□□ -1.67
PDZRN3-203ENST00000462146 MT1BP07438 61 aa4.63□□□□□ -1.67
PDZRN3-203ENST00000462146 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
PDZRN3-203ENST00000462146 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
PDZRN3-203ENST00000462146 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
PDZRN3-203ENST00000462146 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
PDZRN3-203ENST00000462146 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
PDZRN3-203ENST00000462146 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
PDZRN3-203ENST00000462146 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
PDZRN3-203ENST00000462146 KMT2DO14686 5537 aa4.44□□□□□ -1.7
PDZRN3-203ENST00000462146 USH2AO75445 5202 aa4.42□□□□□ -1.7
PDZRN3-203ENST00000462146 INE1O15225 51 aa4.41□□□□□ -1.7
PDZRN3-203ENST00000462146 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PDZRN3-203ENST00000462146 LCE2BO14633 110 aa4.31□□□□□ -1.72
PDZRN3-203ENST00000462146 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
PDZRN3-203ENST00000462146 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
PDZRN3-203ENST00000462146 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
PDZRN3-203ENST00000462146 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
PDZRN3-203ENST00000462146 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
PDZRN3-203ENST00000462146 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
PDZRN3-203ENST00000462146 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
PDZRN3-203ENST00000462146 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
PDZRN3-203ENST00000462146 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
PDZRN3-203ENST00000462146 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
PDZRN3-203ENST00000462146 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
PDZRN3-203ENST00000462146 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
PDZRN3-203ENST00000462146 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
PDZRN3-203ENST00000462146 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms