RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
PABPC4-208ENST00000461578 A8MUN3 132 aa5.66□□□□□ -1.5
PABPC4-208ENST00000461578 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
PABPC4-208ENST00000461578 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
PABPC4-208ENST00000461578 TSTD3H0UI37 97 aa5.59□□□□□ -1.51
PABPC4-208ENST00000461578 H0YAA0 97 aa5.59□□□□□ -1.51
PABPC4-208ENST00000461578 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
PABPC4-208ENST00000461578 M0R143 59 aa5.58□□□□□ -1.52
PABPC4-208ENST00000461578 H3BT86 120 aa5.57□□□□□ -1.52
PABPC4-208ENST00000461578 NDUFC1O43677 76 aa5.56□□□□□ -1.52
PABPC4-208ENST00000461578 CYP4F30PQ9H0H9 118 aa5.55□□□□□ -1.52
PABPC4-208ENST00000461578 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
PABPC4-208ENST00000461578 K7EP34 96 aa5.54□□□□□ -1.52
PABPC4-208ENST00000461578 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
PABPC4-208ENST00000461578 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
PABPC4-208ENST00000461578 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
PABPC4-208ENST00000461578 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
PABPC4-208ENST00000461578 R4GN34 69 aa5.48□□□□□ -1.53
PABPC4-208ENST00000461578 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
PABPC4-208ENST00000461578 BATFQ16520 125 aa5.45□□□□□ -1.54
PABPC4-208ENST00000461578 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
PABPC4-208ENST00000461578 M0QZ58 72 aa5.43□□□□□ -1.54
PABPC4-208ENST00000461578 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
PABPC4-208ENST00000461578 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
PABPC4-208ENST00000461578 A0A1W2PPM0 123 aa5.4□□□□□ -1.54
PABPC4-208ENST00000461578 P0C880 135 aa5.4□□□□□ -1.54
PABPC4-208ENST00000461578 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
PABPC4-208ENST00000461578 ACYP1P07311 99 aa5.38□□□□□ -1.55
PABPC4-208ENST00000461578 TMA7Q9Y2S6 64 aaKnown RBP5.38□□□□□ -1.55
PABPC4-208ENST00000461578 SPCS1Q9Y6A9 102 aa5.38□□□□□ -1.55
PABPC4-208ENST00000461578 TAX1BP3O14907 124 aa5.34□□□□□ -1.55
PABPC4-208ENST00000461578 C20orf197Q8N268 126 aa5.33□□□□□ -1.56
PABPC4-208ENST00000461578 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
PABPC4-208ENST00000461578 H0Y9P7 68 aa5.28□□□□□ -1.56
PABPC4-208ENST00000461578 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
PABPC4-208ENST00000461578 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
PABPC4-208ENST00000461578 ATOX1O00244 68 aa5.23□□□□□ -1.57
PABPC4-208ENST00000461578 UQCRQO14949 82 aa5.22□□□□□ -1.57
PABPC4-208ENST00000461578 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
PABPC4-208ENST00000461578 MT4P47944 62 aa5.2□□□□□ -1.58
PABPC4-208ENST00000461578 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
PABPC4-208ENST00000461578 MT-ATP8P03928 68 aa5.18□□□□□ -1.58
PABPC4-208ENST00000461578 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
PABPC4-208ENST00000461578 LINC00208Q96KT6 92 aa5.16□□□□□ -1.58
PABPC4-208ENST00000461578 SMIM6P0DI80 62 aa5.15□□□□□ -1.59
PABPC4-208ENST00000461578 MT1EP04732 61 aa5.14□□□□□ -1.59
PABPC4-208ENST00000461578 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
PABPC4-208ENST00000461578 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
PABPC4-208ENST00000461578 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
PABPC4-208ENST00000461578 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
PABPC4-208ENST00000461578 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
PABPC4-208ENST00000461578 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.6
PABPC4-208ENST00000461578 ETDBQ3ZM63 59 aa5.05□□□□□ -1.6
PABPC4-208ENST00000461578 MP68P56378 58 aa5.03□□□□□ -1.6
PABPC4-208ENST00000461578 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
PABPC4-208ENST00000461578 ATP5EP2Q5VTU8 51 aa5□□□□□ -1.61
PABPC4-208ENST00000461578 MT1GP13640 62 aa4.99□□□□□ -1.61
PABPC4-208ENST00000461578 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
PABPC4-208ENST00000461578 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
PABPC4-208ENST00000461578 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
PABPC4-208ENST00000461578 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
PABPC4-208ENST00000461578 F8W1H4 67 aa4.96□□□□□ -1.62
PABPC4-208ENST00000461578 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
PABPC4-208ENST00000461578 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
PABPC4-208ENST00000461578 GTF2H5Q6ZYL4 71 aa4.94□□□□□ -1.62
PABPC4-208ENST00000461578 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
PABPC4-208ENST00000461578 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
PABPC4-208ENST00000461578 MT1MQ8N339 61 aa4.93□□□□□ -1.62
PABPC4-208ENST00000461578 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
PABPC4-208ENST00000461578 TRAV7A0A075B6U4 112 aa4.89□□□□□ -1.63
PABPC4-208ENST00000461578 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
PABPC4-208ENST00000461578 A0A0D9SG42 100 aa4.87□□□□□ -1.63
PABPC4-208ENST00000461578 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
PABPC4-208ENST00000461578 H3BPC8 53 aa4.86□□□□□ -1.63
PABPC4-208ENST00000461578 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
PABPC4-208ENST00000461578 FAM240AA0A1B0GVK7 77 aa4.85□□□□□ -1.63
PABPC4-208ENST00000461578 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
PABPC4-208ENST00000461578 MT1LQ93083 61 aa4.84□□□□□ -1.63
PABPC4-208ENST00000461578 ACYP2P14621 99 aa4.82□□□□□ -1.64
PABPC4-208ENST00000461578 LINC00643Q86TS7 51 aa4.79□□□□□ -1.64
PABPC4-208ENST00000461578 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
PABPC4-208ENST00000461578 LOC105371267A0A1B0GV96 52 aa4.76□□□□□ -1.65
PABPC4-208ENST00000461578 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
PABPC4-208ENST00000461578 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
PABPC4-208ENST00000461578 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
PABPC4-208ENST00000461578 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
PABPC4-208ENST00000461578 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
PABPC4-208ENST00000461578 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
PABPC4-208ENST00000461578 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
PABPC4-208ENST00000461578 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
PABPC4-208ENST00000461578 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
PABPC4-208ENST00000461578 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
PABPC4-208ENST00000461578 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
PABPC4-208ENST00000461578 SEC61GP60059 68 aa4.45□□□□□ -1.7
PABPC4-208ENST00000461578 SNURFQ9Y675 71 aa4.45□□□□□ -1.7
PABPC4-208ENST00000461578 SERP1Q9Y6X1 66 aa4.45□□□□□ -1.7
PABPC4-208ENST00000461578 TNP1P09430 55 aa4.44□□□□□ -1.7
PABPC4-208ENST00000461578 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
PABPC4-208ENST00000461578 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
PABPC4-208ENST00000461578 A0A1B0GU33 70 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms