RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 HRES1P13985 223 aa8.76□□□□□ -1.01
NELFCD-201ENST00000460601 LCA10Q71F78 164 aa8.76□□□□□ -1.01
NELFCD-201ENST00000460601 A6NED7 52 aa8.75□□□□□ -1.01
NELFCD-201ENST00000460601 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
NELFCD-201ENST00000460601 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
NELFCD-201ENST00000460601 UBR4Q5T4S7 5183 aa8.71□□□□□ -1.01
NELFCD-201ENST00000460601 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.01
NELFCD-201ENST00000460601 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.01
NELFCD-201ENST00000460601 A6NN06 94 aa8.7□□□□□ -1.02
NELFCD-201ENST00000460601 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
NELFCD-201ENST00000460601 MUC17Q685J3 4493 aa8.65□□□□□ -1.02
NELFCD-201ENST00000460601 RBM12B-AS1Q9P1G2 102 aa8.63□□□□□ -1.03
NELFCD-201ENST00000460601 KRTAP3-1Q9BYR8 98 aa8.6□□□□□ -1.03
NELFCD-201ENST00000460601 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
NELFCD-201ENST00000460601 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
NELFCD-201ENST00000460601 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
NELFCD-201ENST00000460601 ACYP2P14621 99 aa8.48□□□□□ -1.05
NELFCD-201ENST00000460601 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
NELFCD-201ENST00000460601 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
NELFCD-201ENST00000460601 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
NELFCD-201ENST00000460601 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
NELFCD-201ENST00000460601 A0A1B0GU69 56 aa8.32□□□□□ -1.08
NELFCD-201ENST00000460601 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
NELFCD-201ENST00000460601 S4R3F8 94 aa8.29□□□□□ -1.08
NELFCD-201ENST00000460601 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
NELFCD-201ENST00000460601 UQCR11O14957 56 aa8.24□□□□□ -1.09
NELFCD-201ENST00000460601 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
NELFCD-201ENST00000460601 PRAC1Q96KF2 57 aa8.22□□□□□ -1.09
NELFCD-201ENST00000460601 FLGP20930 4061 aaPredicted RBP8.22□□□□□ -1.09
NELFCD-201ENST00000460601 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
NELFCD-201ENST00000460601 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
NELFCD-201ENST00000460601 MT1HP80294 61 aa8.09□□□□□ -1.11
NELFCD-201ENST00000460601 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
NELFCD-201ENST00000460601 M0R2T5 61 aa8□□□□□ -1.13
NELFCD-201ENST00000460601 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
NELFCD-201ENST00000460601 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
NELFCD-201ENST00000460601 P0C880 135 aa7.93□□□□□ -1.14
NELFCD-201ENST00000460601 H0YAA0 97 aa7.86□□□□□ -1.15
NELFCD-201ENST00000460601 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
NELFCD-201ENST00000460601 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
NELFCD-201ENST00000460601 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
NELFCD-201ENST00000460601 A0A1B0GU33 70 aa7.79□□□□□ -1.16
NELFCD-201ENST00000460601 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
NELFCD-201ENST00000460601 H3BS24 57 aa7.77□□□□□ -1.17
NELFCD-201ENST00000460601 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
NELFCD-201ENST00000460601 MT2AP02795 61 aa7.73□□□□□ -1.17
NELFCD-201ENST00000460601 MT1FP04733 61 aa7.72□□□□□ -1.17
NELFCD-201ENST00000460601 K7ERS5 55 aa7.66□□□□□ -1.18
NELFCD-201ENST00000460601 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
NELFCD-201ENST00000460601 M0QZ58 72 aa7.66□□□□□ -1.18
NELFCD-201ENST00000460601 ROMO1P60602 79 aa7.66□□□□□ -1.18
NELFCD-201ENST00000460601 R4GN34 69 aa7.66□□□□□ -1.18
NELFCD-201ENST00000460601 A0A0D9SG42 100 aa7.6□□□□□ -1.19
NELFCD-201ENST00000460601 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
NELFCD-201ENST00000460601 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
NELFCD-201ENST00000460601 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
NELFCD-201ENST00000460601 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
NELFCD-201ENST00000460601 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
NELFCD-201ENST00000460601 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
NELFCD-201ENST00000460601 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
NELFCD-201ENST00000460601 USH2AO75445 5202 aa7.34□□□□□ -1.23
NELFCD-201ENST00000460601 LCE2BO14633 110 aa7.34□□□□□ -1.23
NELFCD-201ENST00000460601 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
NELFCD-201ENST00000460601 MT1BP07438 61 aa7.27□□□□□ -1.25
NELFCD-201ENST00000460601 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
NELFCD-201ENST00000460601 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
NELFCD-201ENST00000460601 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
NELFCD-201ENST00000460601 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
NELFCD-201ENST00000460601 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.26
NELFCD-201ENST00000460601 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
NELFCD-201ENST00000460601 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
NELFCD-201ENST00000460601 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
NELFCD-201ENST00000460601 MT1XP80297 61 aa7.01□□□□□ -1.29
NELFCD-201ENST00000460601 KRTAP10-5P60370 271 aa7□□□□□ -1.29
NELFCD-201ENST00000460601 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
NELFCD-201ENST00000460601 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
NELFCD-201ENST00000460601 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
NELFCD-201ENST00000460601 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
NELFCD-201ENST00000460601 TNP1P09430 55 aa6.75□□□□□ -1.33
NELFCD-201ENST00000460601 KMT2DO14686 5537 aa6.73□□□□□ -1.33
NELFCD-201ENST00000460601 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
NELFCD-201ENST00000460601 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.35
NELFCD-201ENST00000460601 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
NELFCD-201ENST00000460601 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
NELFCD-201ENST00000460601 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
NELFCD-201ENST00000460601 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
NELFCD-201ENST00000460601 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
NELFCD-201ENST00000460601 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
NELFCD-201ENST00000460601 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
NELFCD-201ENST00000460601 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
NELFCD-201ENST00000460601 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
NELFCD-201ENST00000460601 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
NELFCD-201ENST00000460601 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
NELFCD-201ENST00000460601 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
NELFCD-201ENST00000460601 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
NELFCD-201ENST00000460601 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
NELFCD-201ENST00000460601 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
NELFCD-201ENST00000460601 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
NELFCD-201ENST00000460601 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
NELFCD-201ENST00000460601 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms