RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 H7BZZ5 65 aa11□□□□□ -0.65
C9orf3-209ENST00000460573 CYSTM1Q9H1C7 97 aa10.98□□□□□ -0.65
C9orf3-209ENST00000460573 TMEM258P61165 79 aa10.96□□□□□ -0.65
C9orf3-209ENST00000460573 KRTAP3-1Q9BYR8 98 aa10.92□□□□□ -0.66
C9orf3-209ENST00000460573 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
C9orf3-209ENST00000460573 ATP5EP56381 51 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-209ENST00000460573 KRTAP9-8Q9BYQ0 159 aa10.83□□□□□ -0.68
C9orf3-209ENST00000460573 S4R3F8 94 aa10.79□□□□□ -0.68
C9orf3-209ENST00000460573 A8MUN3 132 aa10.76□□□□□ -0.69
C9orf3-209ENST00000460573 MT2AP02795 61 aa10.72□□□□□ -0.69
C9orf3-209ENST00000460573 LCA10Q71F78 164 aa10.7□□□□□ -0.7
C9orf3-209ENST00000460573 KRTAP10-10P60014 251 aa10.67□□□□□ -0.7
C9orf3-209ENST00000460573 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
C9orf3-209ENST00000460573 DMAC1Q96GE9 116 aa10.64□□□□□ -0.71
C9orf3-209ENST00000460573 MT1FP04733 61 aa10.63□□□□□ -0.71
C9orf3-209ENST00000460573 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
C9orf3-209ENST00000460573 ACYP2P14621 99 aa10.62□□□□□ -0.71
C9orf3-209ENST00000460573 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
C9orf3-209ENST00000460573 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
C9orf3-209ENST00000460573 USH2AO75445 5202 aa10.54□□□□□ -0.72
C9orf3-209ENST00000460573 KRTAP9-3Q9BYQ3 159 aa10.48□□□□□ -0.73
C9orf3-209ENST00000460573 COA5Q86WW8 74 aa10.47□□□□□ -0.73
C9orf3-209ENST00000460573 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-209ENST00000460573 SSPOA2VEC9 5147 aa10.46□□□□□ -0.74
C9orf3-209ENST00000460573 LCE2BO14633 110 aa10.44□□□□□ -0.74
C9orf3-209ENST00000460573 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
C9orf3-209ENST00000460573 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
C9orf3-209ENST00000460573 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
C9orf3-209ENST00000460573 H0YAA0 97 aa10.36□□□□□ -0.75
C9orf3-209ENST00000460573 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
C9orf3-209ENST00000460573 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
C9orf3-209ENST00000460573 FCGBPQ9Y6R7 5405 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-209ENST00000460573 V9GYY9 64 aa10.22□□□□□ -0.77
C9orf3-209ENST00000460573 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
C9orf3-209ENST00000460573 ADM2Q7Z4H4 148 aa10.19□□□□□ -0.78
C9orf3-209ENST00000460573 Q1T7F1 81 aa10.16□□□□□ -0.78
C9orf3-209ENST00000460573 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
C9orf3-209ENST00000460573 KRTAP19-6Q3LI70 58 aa10.13□□□□□ -0.79
C9orf3-209ENST00000460573 LINC01558Q9Y6Z2 57 aa10.1□□□□□ -0.79
C9orf3-209ENST00000460573 P0C880 135 aa10□□□□□ -0.81
C9orf3-209ENST00000460573 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
C9orf3-209ENST00000460573 SEC61GP60059 68 aa9.99□□□□□ -0.81
C9orf3-209ENST00000460573 KRTAP19-8Q3LI54 63 aa9.99□□□□□ -0.81
C9orf3-209ENST00000460573 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
C9orf3-209ENST00000460573 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
C9orf3-209ENST00000460573 Q5VV11 94 aa9.97□□□□□ -0.81
C9orf3-209ENST00000460573 A0A1B0GU69 56 aa9.95□□□□□ -0.82
C9orf3-209ENST00000460573 R4GN34 69 aa9.93□□□□□ -0.82
C9orf3-209ENST00000460573 SYNE2Q8WXH0 6885 aaKnown RBP9.93□□□□□ -0.82
C9orf3-209ENST00000460573 MT1BP07438 61 aa9.89□□□□□ -0.83
C9orf3-209ENST00000460573 PSPHP1O15172 72 aa9.86□□□□□ -0.83
C9orf3-209ENST00000460573 M0QZ58 72 aa9.85□□□□□ -0.83
C9orf3-209ENST00000460573 A6NN06 94 aa9.77□□□□□ -0.85
C9orf3-209ENST00000460573 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
C9orf3-209ENST00000460573 A0A1B0GU33 70 aa9.69□□□□□ -0.86
C9orf3-209ENST00000460573 UQCR11O14957 56 aa9.67□□□□□ -0.86
C9orf3-209ENST00000460573 PLAC4Q8WY50 150 aa9.67□□□□□ -0.86
C9orf3-209ENST00000460573 LINC01554Q52M75 96 aa9.65□□□□□ -0.86
C9orf3-209ENST00000460573 A6NED7 52 aa9.63□□□□□ -0.87
C9orf3-209ENST00000460573 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
C9orf3-209ENST00000460573 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
C9orf3-209ENST00000460573 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
C9orf3-209ENST00000460573 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
C9orf3-209ENST00000460573 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
C9orf3-209ENST00000460573 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
C9orf3-209ENST00000460573 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
C9orf3-209ENST00000460573 MT1XP80297 61 aa9.39□□□□□ -0.91
C9orf3-209ENST00000460573 A0A0D9SG42 100 aa9.3□□□□□ -0.92
C9orf3-209ENST00000460573 NEBP20929 6669 aa9.29□□□□□ -0.92
C9orf3-209ENST00000460573 MUC12Q9UKN1 5478 aa9.27□□□□□ -0.93
C9orf3-209ENST00000460573 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
C9orf3-209ENST00000460573 A8MU10 97 aa9.24□□□□□ -0.93
C9orf3-209ENST00000460573 K7ERS5 55 aa9.21□□□□□ -0.94
C9orf3-209ENST00000460573 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
C9orf3-209ENST00000460573 KRTAP5-9P26371 169 aa9.18□□□□□ -0.94
C9orf3-209ENST00000460573 SPINT4Q6UDR6 99 aa9.17□□□□□ -0.94
C9orf3-209ENST00000460573 KRTAP20-1Q3LI63 56 aa9.15□□□□□ -0.94
C9orf3-209ENST00000460573 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
C9orf3-209ENST00000460573 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
C9orf3-209ENST00000460573 KMT2DO14686 5537 aa9.03□□□□□ -0.96
C9orf3-209ENST00000460573 SPRR2FQ96RM1 72 aa9.02□□□□□ -0.97
C9orf3-209ENST00000460573 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
C9orf3-209ENST00000460573 KRTAP10-7P60409 375 aaPredicted RBP8.96□□□□□ -0.98
C9orf3-209ENST00000460573 KRTAP10-12P60413 245 aa8.96□□□□□ -0.98
C9orf3-209ENST00000460573 PMAIP1Q13794 54 aa8.96□□□□□ -0.98
C9orf3-209ENST00000460573 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
C9orf3-209ENST00000460573 SPRR2EP22531 72 aa8.93□□□□□ -0.98
C9orf3-209ENST00000460573 SPRR2BP35325 72 aa8.93□□□□□ -0.98
C9orf3-209ENST00000460573 SPRR2AP35326 72 aa8.93□□□□□ -0.98
C9orf3-209ENST00000460573 KRTAP2-3P0C7H8 128 aa8.84□□□□□ -0.99
C9orf3-209ENST00000460573 KRTAP2-4Q9BYR9 128 aa8.84□□□□□ -0.99
C9orf3-209ENST00000460573 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
C9orf3-209ENST00000460573 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
C9orf3-209ENST00000460573 ROMO1P60602 79 aa8.73□□□□□ -1.01
C9orf3-209ENST00000460573 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
C9orf3-209ENST00000460573 LCE1AQ5T7P2 110 aa8.67□□□□□ -1.02
C9orf3-209ENST00000460573 SPRR2DP22532 72 aa8.64□□□□□ -1.03
C9orf3-209ENST00000460573 TNP1P09430 55 aa8.63□□□□□ -1.03
C9orf3-209ENST00000460573 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
C9orf3-209ENST00000460573 KRTAP2-2Q9BYT5 123 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms