RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
SMNDC1-203ENST00000460483 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
SMNDC1-203ENST00000460483 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
SMNDC1-203ENST00000460483 LINC00208Q96KT6 92 aa5.65□□□□□ -1.5
SMNDC1-203ENST00000460483 MUC2Q02817 5179 aa5.64□□□□□ -1.51
SMNDC1-203ENST00000460483 CYP4F30PQ9H0H9 118 aa5.64□□□□□ -1.51
SMNDC1-203ENST00000460483 HRES1P13985 223 aa5.63□□□□□ -1.51
SMNDC1-203ENST00000460483 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
SMNDC1-203ENST00000460483 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
SMNDC1-203ENST00000460483 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
SMNDC1-203ENST00000460483 C4orf26Q17RF5 130 aa5.56□□□□□ -1.52
SMNDC1-203ENST00000460483 A8MUN3 132 aa5.55□□□□□ -1.52
SMNDC1-203ENST00000460483 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
SMNDC1-203ENST00000460483 M0R2T5 61 aa5.54□□□□□ -1.52
SMNDC1-203ENST00000460483 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
SMNDC1-203ENST00000460483 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
SMNDC1-203ENST00000460483 COX7CP15954 63 aa5.52□□□□□ -1.53
SMNDC1-203ENST00000460483 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
SMNDC1-203ENST00000460483 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
SMNDC1-203ENST00000460483 NDUFC1O43677 76 aa5.5□□□□□ -1.53
SMNDC1-203ENST00000460483 KLKP1Q107X0 134 aa5.48□□□□□ -1.53
SMNDC1-203ENST00000460483 MT1HP80294 61 aa5.46□□□□□ -1.54
SMNDC1-203ENST00000460483 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
SMNDC1-203ENST00000460483 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
SMNDC1-203ENST00000460483 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
SMNDC1-203ENST00000460483 S4R3F8 94 aa5.43□□□□□ -1.54
SMNDC1-203ENST00000460483 ACYP2P14621 99 aa5.42□□□□□ -1.54
SMNDC1-203ENST00000460483 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
SMNDC1-203ENST00000460483 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
SMNDC1-203ENST00000460483 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
SMNDC1-203ENST00000460483 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
SMNDC1-203ENST00000460483 LCA10Q71F78 164 aa5.34□□□□□ -1.55
SMNDC1-203ENST00000460483 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-203ENST00000460483 H7BZZ5 65 aa5.31□□□□□ -1.56
SMNDC1-203ENST00000460483 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-203ENST00000460483 CCDC179H3BU77 68 aa5.29□□□□□ -1.56
SMNDC1-203ENST00000460483 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-203ENST00000460483 TMEM258P61165 79 aa5.25□□□□□ -1.57
SMNDC1-203ENST00000460483 H0YAA0 97 aa5.23□□□□□ -1.57
SMNDC1-203ENST00000460483 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
SMNDC1-203ENST00000460483 COA5Q86WW8 74 aa5.2□□□□□ -1.58
SMNDC1-203ENST00000460483 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
SMNDC1-203ENST00000460483 MT2AP02795 61 aa5.17□□□□□ -1.58
SMNDC1-203ENST00000460483 PCP4P48539 62 aa5.17□□□□□ -1.58
SMNDC1-203ENST00000460483 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
SMNDC1-203ENST00000460483 SEC61GP60059 68 aa5.16□□□□□ -1.58
SMNDC1-203ENST00000460483 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
SMNDC1-203ENST00000460483 MT1FP04733 61 aa5.11□□□□□ -1.59
SMNDC1-203ENST00000460483 SERP1Q9Y6X1 66 aa5.11□□□□□ -1.59
SMNDC1-203ENST00000460483 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
SMNDC1-203ENST00000460483 R4GN34 69 aa5.04□□□□□ -1.6
SMNDC1-203ENST00000460483 A0A1B0GU69 56 aa5.01□□□□□ -1.61
SMNDC1-203ENST00000460483 M0QZ58 72 aa5□□□□□ -1.61
SMNDC1-203ENST00000460483 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
SMNDC1-203ENST00000460483 V9GYY9 64 aa4.99□□□□□ -1.61
SMNDC1-203ENST00000460483 P0C880 135 aa4.98□□□□□ -1.61
SMNDC1-203ENST00000460483 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
SMNDC1-203ENST00000460483 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
SMNDC1-203ENST00000460483 Q5VV11 94 aa4.94□□□□□ -1.62
SMNDC1-203ENST00000460483 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
SMNDC1-203ENST00000460483 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
SMNDC1-203ENST00000460483 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
SMNDC1-203ENST00000460483 A0A1B0GU33 70 aa4.92□□□□□ -1.62
SMNDC1-203ENST00000460483 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-203ENST00000460483 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
SMNDC1-203ENST00000460483 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
SMNDC1-203ENST00000460483 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
SMNDC1-203ENST00000460483 Q1T7F1 81 aa4.86□□□□□ -1.63
SMNDC1-203ENST00000460483 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
SMNDC1-203ENST00000460483 A6NN06 94 aa4.83□□□□□ -1.64
SMNDC1-203ENST00000460483 UQCR11O14957 56 aa4.83□□□□□ -1.64
SMNDC1-203ENST00000460483 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-203ENST00000460483 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SMNDC1-203ENST00000460483 MT1BP07438 61 aa4.77□□□□□ -1.65
SMNDC1-203ENST00000460483 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
SMNDC1-203ENST00000460483 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
SMNDC1-203ENST00000460483 PSPHP1O15172 72 aa4.75□□□□□ -1.65
SMNDC1-203ENST00000460483 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
SMNDC1-203ENST00000460483 A0A0D9SG42 100 aa4.73□□□□□ -1.65
SMNDC1-203ENST00000460483 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
SMNDC1-203ENST00000460483 USH2AO75445 5202 aa4.73□□□□□ -1.65
SMNDC1-203ENST00000460483 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
SMNDC1-203ENST00000460483 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SMNDC1-203ENST00000460483 K7ERS5 55 aa4.7□□□□□ -1.66
SMNDC1-203ENST00000460483 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
SMNDC1-203ENST00000460483 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
SMNDC1-203ENST00000460483 A6NED7 52 aa4.68□□□□□ -1.66
SMNDC1-203ENST00000460483 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
SMNDC1-203ENST00000460483 A8MU10 97 aa4.62□□□□□ -1.67
SMNDC1-203ENST00000460483 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
SMNDC1-203ENST00000460483 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
SMNDC1-203ENST00000460483 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
SMNDC1-203ENST00000460483 MT1XP80297 61 aa4.56□□□□□ -1.68
SMNDC1-203ENST00000460483 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
SMNDC1-203ENST00000460483 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
SMNDC1-203ENST00000460483 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
SMNDC1-203ENST00000460483 TNP1P09430 55 aa4.44□□□□□ -1.7
SMNDC1-203ENST00000460483 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
SMNDC1-203ENST00000460483 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
SMNDC1-203ENST00000460483 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms