RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 USH2AO75445 5202 aa7.65□□□□□ -1.19
SDF4-204ENST00000459994 MT1FP04733 61 aa7.64□□□□□ -1.19
SDF4-204ENST00000459994 A8MUN3 132 aa7.61□□□□□ -1.19
SDF4-204ENST00000459994 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
SDF4-204ENST00000459994 NDUFC1O43677 76 aa7.6□□□□□ -1.19
SDF4-204ENST00000459994 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
SDF4-204ENST00000459994 LCE2BO14633 110 aa7.58□□□□□ -1.2
SDF4-204ENST00000459994 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
SDF4-204ENST00000459994 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
SDF4-204ENST00000459994 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
SDF4-204ENST00000459994 H7BZZ5 65 aa7.54□□□□□ -1.2
SDF4-204ENST00000459994 CYSTM1Q9H1C7 97 aa7.54□□□□□ -1.2
SDF4-204ENST00000459994 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
SDF4-204ENST00000459994 S4R3F8 94 aa7.5□□□□□ -1.21
SDF4-204ENST00000459994 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
SDF4-204ENST00000459994 ACYP2P14621 99 aa7.47□□□□□ -1.21
SDF4-204ENST00000459994 LCA10Q71F78 164 aa7.45□□□□□ -1.22
SDF4-204ENST00000459994 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
SDF4-204ENST00000459994 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
SDF4-204ENST00000459994 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
SDF4-204ENST00000459994 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
SDF4-204ENST00000459994 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
SDF4-204ENST00000459994 PCP4P48539 62 aa7.38□□□□□ -1.23
SDF4-204ENST00000459994 ATP5EP56381 51 aaPredicted RBP7.35□□□□□ -1.23
SDF4-204ENST00000459994 TMEM258P61165 79 aa7.35□□□□□ -1.23
SDF4-204ENST00000459994 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
SDF4-204ENST00000459994 COA5Q86WW8 74 aa7.31□□□□□ -1.24
SDF4-204ENST00000459994 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
SDF4-204ENST00000459994 KRTAP19-6Q3LI70 58 aa7.26□□□□□ -1.25
SDF4-204ENST00000459994 H0YAA0 97 aa7.22□□□□□ -1.25
SDF4-204ENST00000459994 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
SDF4-204ENST00000459994 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
SDF4-204ENST00000459994 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
SDF4-204ENST00000459994 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
SDF4-204ENST00000459994 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
SDF4-204ENST00000459994 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
SDF4-204ENST00000459994 P0C880 135 aa7.03□□□□□ -1.28
SDF4-204ENST00000459994 MT1BP07438 61 aa6.99□□□□□ -1.29
SDF4-204ENST00000459994 SEC61GP60059 68 aa6.99□□□□□ -1.29
SDF4-204ENST00000459994 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
SDF4-204ENST00000459994 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
SDF4-204ENST00000459994 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
SDF4-204ENST00000459994 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
SDF4-204ENST00000459994 A0A1B0GU69 56 aa6.92□□□□□ -1.3
SDF4-204ENST00000459994 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
SDF4-204ENST00000459994 R4GN34 69 aa6.9□□□□□ -1.3
SDF4-204ENST00000459994 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
SDF4-204ENST00000459994 M0QZ58 72 aa6.87□□□□□ -1.31
SDF4-204ENST00000459994 Q5VV11 94 aa6.87□□□□□ -1.31
SDF4-204ENST00000459994 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
SDF4-204ENST00000459994 V9GYY9 64 aa6.86□□□□□ -1.31
SDF4-204ENST00000459994 A6NN06 94 aa6.85□□□□□ -1.31
SDF4-204ENST00000459994 Q1T7F1 81 aa6.84□□□□□ -1.31
SDF4-204ENST00000459994 A0A1B0GU33 70 aa6.83□□□□□ -1.32
SDF4-204ENST00000459994 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
SDF4-204ENST00000459994 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
SDF4-204ENST00000459994 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
SDF4-204ENST00000459994 PSPHP1O15172 72 aa6.69□□□□□ -1.34
SDF4-204ENST00000459994 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
SDF4-204ENST00000459994 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
SDF4-204ENST00000459994 NEBP20929 6669 aa6.67□□□□□ -1.34
SDF4-204ENST00000459994 UQCR11O14957 56 aa6.66□□□□□ -1.34
SDF4-204ENST00000459994 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
SDF4-204ENST00000459994 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SDF4-204ENST00000459994 A0A0D9SG42 100 aa6.59□□□□□ -1.35
SDF4-204ENST00000459994 A8MU10 97 aa6.55□□□□□ -1.36
SDF4-204ENST00000459994 MIR22HGQ0VDD5 57 aa6.54□□□□□ -1.36
SDF4-204ENST00000459994 KMT2DO14686 5537 aa6.53□□□□□ -1.36
SDF4-204ENST00000459994 MT1XP80297 61 aa6.52□□□□□ -1.37
SDF4-204ENST00000459994 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
SDF4-204ENST00000459994 A6NED7 52 aa6.5□□□□□ -1.37
SDF4-204ENST00000459994 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
SDF4-204ENST00000459994 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
SDF4-204ENST00000459994 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
SDF4-204ENST00000459994 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
SDF4-204ENST00000459994 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
SDF4-204ENST00000459994 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
SDF4-204ENST00000459994 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
SDF4-204ENST00000459994 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
SDF4-204ENST00000459994 K7ERS5 55 aa6.33□□□□□ -1.4
SDF4-204ENST00000459994 SPRR2EP22531 72 aa6.32□□□□□ -1.4
SDF4-204ENST00000459994 SPRR2BP35325 72 aa6.32□□□□□ -1.4
SDF4-204ENST00000459994 SPRR2AP35326 72 aa6.32□□□□□ -1.4
SDF4-204ENST00000459994 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
SDF4-204ENST00000459994 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
SDF4-204ENST00000459994 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
SDF4-204ENST00000459994 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
SDF4-204ENST00000459994 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
SDF4-204ENST00000459994 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
SDF4-204ENST00000459994 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
SDF4-204ENST00000459994 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
SDF4-204ENST00000459994 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
SDF4-204ENST00000459994 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
SDF4-204ENST00000459994 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SDF4-204ENST00000459994 TNP1P09430 55 aa6.07□□□□□ -1.44
SDF4-204ENST00000459994 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
SDF4-204ENST00000459994 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
SDF4-204ENST00000459994 ROMO1P60602 79 aa6□□□□□ -1.45
SDF4-204ENST00000459994 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
SDF4-204ENST00000459994 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms