RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SERP2Q8N6R1 65 aa5.98□□□□□ -1.45
COL18A1-206ENST00000459895 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
COL18A1-206ENST00000459895 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
COL18A1-206ENST00000459895 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
COL18A1-206ENST00000459895 USH2AO75445 5202 aa5.95□□□□□ -1.46
COL18A1-206ENST00000459895 LCE2BO14633 110 aa5.95□□□□□ -1.46
COL18A1-206ENST00000459895 C20orf197Q8N268 126 aa5.95□□□□□ -1.46
COL18A1-206ENST00000459895 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
COL18A1-206ENST00000459895 NDUFC1O43677 76 aa5.92□□□□□ -1.46
COL18A1-206ENST00000459895 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
COL18A1-206ENST00000459895 COX7CP15954 63 aa5.87□□□□□ -1.47
COL18A1-206ENST00000459895 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
COL18A1-206ENST00000459895 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
COL18A1-206ENST00000459895 H0YAA0 97 aa5.82□□□□□ -1.48
COL18A1-206ENST00000459895 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
COL18A1-206ENST00000459895 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
COL18A1-206ENST00000459895 ACYP2P14621 99 aa5.8□□□□□ -1.48
COL18A1-206ENST00000459895 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
COL18A1-206ENST00000459895 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
COL18A1-206ENST00000459895 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
COL18A1-206ENST00000459895 H7BZZ5 65 aa5.75□□□□□ -1.49
COL18A1-206ENST00000459895 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
COL18A1-206ENST00000459895 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
COL18A1-206ENST00000459895 P0C880 135 aa5.71□□□□□ -1.5
COL18A1-206ENST00000459895 CCDC179H3BU77 68 aa5.7□□□□□ -1.5
COL18A1-206ENST00000459895 MT1BP07438 61 aa5.7□□□□□ -1.5
COL18A1-206ENST00000459895 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
COL18A1-206ENST00000459895 COA5Q86WW8 74 aa5.69□□□□□ -1.5
COL18A1-206ENST00000459895 SPTSSBQ8NFR3 76 aa5.69□□□□□ -1.5
COL18A1-206ENST00000459895 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
COL18A1-206ENST00000459895 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
COL18A1-206ENST00000459895 Q5VV11 94 aa5.68□□□□□ -1.5
COL18A1-206ENST00000459895 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
COL18A1-206ENST00000459895 M0QZ58 72 aa5.6□□□□□ -1.51
COL18A1-206ENST00000459895 R4GN34 69 aa5.6□□□□□ -1.51
COL18A1-206ENST00000459895 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
COL18A1-206ENST00000459895 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
COL18A1-206ENST00000459895 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
COL18A1-206ENST00000459895 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
COL18A1-206ENST00000459895 A6NN06 94 aa5.49□□□□□ -1.53
COL18A1-206ENST00000459895 TMEM258P61165 79 aa5.49□□□□□ -1.53
COL18A1-206ENST00000459895 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
COL18A1-206ENST00000459895 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
COL18A1-206ENST00000459895 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
COL18A1-206ENST00000459895 SEC61GP60059 68 aa5.41□□□□□ -1.54
COL18A1-206ENST00000459895 MT1XP80297 61 aa5.41□□□□□ -1.54
COL18A1-206ENST00000459895 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
COL18A1-206ENST00000459895 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
COL18A1-206ENST00000459895 A0A1B0GU69 56 aa5.35□□□□□ -1.55
COL18A1-206ENST00000459895 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
COL18A1-206ENST00000459895 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
COL18A1-206ENST00000459895 A0A1B0GU33 70 aa5.32□□□□□ -1.56
COL18A1-206ENST00000459895 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
COL18A1-206ENST00000459895 A0A0D9SG42 100 aa5.29□□□□□ -1.56
COL18A1-206ENST00000459895 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
COL18A1-206ENST00000459895 PCP4P48539 62 aa5.24□□□□□ -1.57
COL18A1-206ENST00000459895 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
COL18A1-206ENST00000459895 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
COL18A1-206ENST00000459895 A8MU10 97 aa5.2□□□□□ -1.58
COL18A1-206ENST00000459895 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
COL18A1-206ENST00000459895 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
COL18A1-206ENST00000459895 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
COL18A1-206ENST00000459895 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
COL18A1-206ENST00000459895 KMT2DO14686 5537 aa5.17□□□□□ -1.58
COL18A1-206ENST00000459895 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
COL18A1-206ENST00000459895 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
COL18A1-206ENST00000459895 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
COL18A1-206ENST00000459895 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
COL18A1-206ENST00000459895 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
COL18A1-206ENST00000459895 Q1T7F1 81 aa5.08□□□□□ -1.6
COL18A1-206ENST00000459895 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
COL18A1-206ENST00000459895 UQCR11O14957 56 aa5.07□□□□□ -1.6
COL18A1-206ENST00000459895 PSPHP1O15172 72 aa5.07□□□□□ -1.6
COL18A1-206ENST00000459895 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
COL18A1-206ENST00000459895 V9GYY9 64 aa5.07□□□□□ -1.6
COL18A1-206ENST00000459895 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
COL18A1-206ENST00000459895 NEBP20929 6669 aa5.03□□□□□ -1.6
COL18A1-206ENST00000459895 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
COL18A1-206ENST00000459895 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
COL18A1-206ENST00000459895 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
COL18A1-206ENST00000459895 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
COL18A1-206ENST00000459895 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
COL18A1-206ENST00000459895 A6NED7 52 aa4.9□□□□□ -1.63
COL18A1-206ENST00000459895 SPRR2EP22531 72 aa4.89□□□□□ -1.63
COL18A1-206ENST00000459895 SPRR2BP35325 72 aa4.89□□□□□ -1.63
COL18A1-206ENST00000459895 SPRR2AP35326 72 aa4.89□□□□□ -1.63
COL18A1-206ENST00000459895 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
COL18A1-206ENST00000459895 TNP1P09430 55 aa4.83□□□□□ -1.64
COL18A1-206ENST00000459895 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
COL18A1-206ENST00000459895 K7ERS5 55 aa4.81□□□□□ -1.64
COL18A1-206ENST00000459895 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
COL18A1-206ENST00000459895 MT1EP04732 61 aa4.78□□□□□ -1.64
COL18A1-206ENST00000459895 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
COL18A1-206ENST00000459895 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
COL18A1-206ENST00000459895 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
COL18A1-206ENST00000459895 SPRR2DP22532 72 aa4.72□□□□□ -1.65
COL18A1-206ENST00000459895 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
COL18A1-206ENST00000459895 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
COL18A1-206ENST00000459895 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
COL18A1-206ENST00000459895 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms