RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 LCA10Q71F78 164 aa12.11□□□□□ -0.47
U2AF1-204ENST00000459639 KRTAP19-2Q3LHN2 52 aa12.1□□□□□ -0.47
U2AF1-204ENST00000459639 V9GYY9 64 aa12.1□□□□□ -0.47
U2AF1-204ENST00000459639 KRTAP3-3Q9BYR6 98 aa12.06□□□□□ -0.48
U2AF1-204ENST00000459639 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
U2AF1-204ENST00000459639 LINC01558Q9Y6Z2 57 aa12.04□□□□□ -0.48
U2AF1-204ENST00000459639 UBR4Q5T4S7 5183 aa11.94□□□□□ -0.5
U2AF1-204ENST00000459639 MUC2Q02817 5179 aa11.93□□□□□ -0.5
U2AF1-204ENST00000459639 PRR15LQ9BU68 103 aa11.9□□□□□ -0.5
U2AF1-204ENST00000459639 CSAG1Q6PB30 78 aa11.88□□□□□ -0.51
U2AF1-204ENST00000459639 PSPHP1O15172 72 aa11.87□□□□□ -0.51
U2AF1-204ENST00000459639 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
U2AF1-204ENST00000459639 A0A1B0GU69 56 aa11.86□□□□□ -0.51
U2AF1-204ENST00000459639 LCE2CQ5TA81 110 aa11.84□□□□□ -0.51
U2AF1-204ENST00000459639 SEC61GP60059 68 aa11.81□□□□□ -0.52
U2AF1-204ENST00000459639 Q5VV11 94 aa11.8□□□□□ -0.52
U2AF1-204ENST00000459639 FLGP20930 4061 aaPredicted RBP11.71□□□□□ -0.53
U2AF1-204ENST00000459639 H0YAA0 97 aa11.65□□□□□ -0.54
U2AF1-204ENST00000459639 MT1HP80294 61 aa11.6□□□□□ -0.55
U2AF1-204ENST00000459639 KRTAP10-6P60371 365 aaPredicted RBP11.59□□□□□ -0.55
U2AF1-204ENST00000459639 ADM2Q7Z4H4 148 aa11.59□□□□□ -0.55
U2AF1-204ENST00000459639 A6NED7 52 aa11.53□□□□□ -0.56
U2AF1-204ENST00000459639 A0A1B0GU33 70 aa11.51□□□□□ -0.57
U2AF1-204ENST00000459639 P0C880 135 aa11.51□□□□□ -0.57
U2AF1-204ENST00000459639 FAT4Q6V0I7 4981 aa11.5□□□□□ -0.57
U2AF1-204ENST00000459639 UQCR11O14957 56 aa11.49□□□□□ -0.57
U2AF1-204ENST00000459639 M0R2T5 61 aa11.48□□□□□ -0.57
U2AF1-204ENST00000459639 BRK1Q8WUW1 75 aa11.37□□□□□ -0.59
U2AF1-204ENST00000459639 MIR22HGQ0VDD5 57 aa11.36□□□□□ -0.59
U2AF1-204ENST00000459639 SPATA8Q6RVD6 105 aa11.34□□□□□ -0.59
U2AF1-204ENST00000459639 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
U2AF1-204ENST00000459639 KRTAP13-4Q3LI77 160 aa11.27□□□□□ -0.61
U2AF1-204ENST00000459639 M0QZ58 72 aa11.26□□□□□ -0.61
U2AF1-204ENST00000459639 A8MU10 97 aa11.23□□□□□ -0.61
U2AF1-204ENST00000459639 LORP23490 312 aaPredicted RBP11.2□□□□□ -0.62
U2AF1-204ENST00000459639 R4GN34 69 aa11.19□□□□□ -0.62
U2AF1-204ENST00000459639 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
U2AF1-204ENST00000459639 KRTAP9-8Q9BYQ0 159 aa11.17□□□□□ -0.62
U2AF1-204ENST00000459639 CRIPTQ9P021 101 aa11.16□□□□□ -0.62
U2AF1-204ENST00000459639 MT2AP02795 61 aa11.14□□□□□ -0.63
U2AF1-204ENST00000459639 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
U2AF1-204ENST00000459639 MT1FP04733 61 aa11.07□□□□□ -0.64
U2AF1-204ENST00000459639 A0A0D9SG42 100 aa11.04□□□□□ -0.64
U2AF1-204ENST00000459639 KRTAP10-10P60014 251 aa11.03□□□□□ -0.64
U2AF1-204ENST00000459639 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
U2AF1-204ENST00000459639 SPRR2GQ9BYE4 73 aa10.92□□□□□ -0.66
U2AF1-204ENST00000459639 K7ERS5 55 aa10.87□□□□□ -0.67
U2AF1-204ENST00000459639 KRTAP19-1Q8IUB9 90 aa10.87□□□□□ -0.67
U2AF1-204ENST00000459639 KRTAP12-1P59990 96 aa10.85□□□□□ -0.67
U2AF1-204ENST00000459639 A6NN06 94 aa10.82□□□□□ -0.68
U2AF1-204ENST00000459639 KRTAP12-2P59991 146 aa10.81□□□□□ -0.68
U2AF1-204ENST00000459639 SPINT4Q6UDR6 99 aa10.79□□□□□ -0.68
U2AF1-204ENST00000459639 KRTAP9-3Q9BYQ3 159 aa10.76□□□□□ -0.69
U2AF1-204ENST00000459639 PMAIP1Q13794 54 aa10.74□□□□□ -0.69
U2AF1-204ENST00000459639 KRTAP19-8Q3LI54 63 aa10.64□□□□□ -0.71
U2AF1-204ENST00000459639 PLAC4Q8WY50 150 aa10.53□□□□□ -0.72
U2AF1-204ENST00000459639 MT1BP07438 61 aa10.48□□□□□ -0.73
U2AF1-204ENST00000459639 CAMK2N1Q7Z7J9 78 aa10.48□□□□□ -0.73
U2AF1-204ENST00000459639 LCE2BO14633 110 aa10.46□□□□□ -0.74
U2AF1-204ENST00000459639 ROMO1P60602 79 aa10.4□□□□□ -0.74
U2AF1-204ENST00000459639 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
U2AF1-204ENST00000459639 C10orf95Q9H7T3 257 aa10.26□□□□□ -0.77
U2AF1-204ENST00000459639 MT1XP80297 61 aa10.13□□□□□ -0.79
U2AF1-204ENST00000459639 KRTAP10-5P60370 271 aa10.11□□□□□ -0.79
U2AF1-204ENST00000459639 USH2AO75445 5202 aa10.06□□□□□ -0.8
U2AF1-204ENST00000459639 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
U2AF1-204ENST00000459639 PRO2289Q9P1D8 64 aa10.06□□□□□ -0.8
U2AF1-204ENST00000459639 SVIPQ8NHG7 77 aa10.02□□□□□ -0.8
U2AF1-204ENST00000459639 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.81
U2AF1-204ENST00000459639 TNP1P09430 55 aa9.97□□□□□ -0.81
U2AF1-204ENST00000459639 KRTAP19-6Q3LI70 58 aa9.87□□□□□ -0.83
U2AF1-204ENST00000459639 SSPOA2VEC9 5147 aa9.79□□□□□ -0.84
U2AF1-204ENST00000459639 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
U2AF1-204ENST00000459639 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.86
U2AF1-204ENST00000459639 KRTAP23-1A1A580 65 aa9.69□□□□□ -0.86
U2AF1-204ENST00000459639 PP632Q6XCG6 107 aa9.68□□□□□ -0.86
U2AF1-204ENST00000459639 LOC100996750A0A140TA64 210 aa9.64□□□□□ -0.87
U2AF1-204ENST00000459639 KRTAP4-6Q9BYQ5 205 aa9.64□□□□□ -0.87
U2AF1-204ENST00000459639 KRTAP10-12P60413 245 aa9.62□□□□□ -0.87
U2AF1-204ENST00000459639 FSIP2Q5CZC0 6907 aa9.58□□□□□ -0.88
U2AF1-204ENST00000459639 LCE3AQ5TA76 89 aa9.55□□□□□ -0.88
U2AF1-204ENST00000459639 CRCT1Q9UGL9 99 aa9.42□□□□□ -0.9
U2AF1-204ENST00000459639 KRTAP8-1Q8IUC2 63 aa9.37□□□□□ -0.91
U2AF1-204ENST00000459639 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-204ENST00000459639 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
U2AF1-204ENST00000459639 KRTAP4-8Q9BYQ9 185 aa9.32□□□□□ -0.92
U2AF1-204ENST00000459639 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
U2AF1-204ENST00000459639 KRTAP19-5Q3LI72 72 aa9.13□□□□□ -0.95
U2AF1-204ENST00000459639 KMT2DO14686 5537 aa9.13□□□□□ -0.95
U2AF1-204ENST00000459639 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
U2AF1-204ENST00000459639 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
U2AF1-204ENST00000459639 KRTAP15-1Q3LI76 137 aa8.98□□□□□ -0.97
U2AF1-204ENST00000459639 MT1EP04732 61 aa8.89□□□□□ -0.99
U2AF1-204ENST00000459639 MACF1Q9UPN3 7388 aaKnown RBP8.85□□□□□ -0.99
U2AF1-204ENST00000459639 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.73□□□□□ -1.01
U2AF1-204ENST00000459639 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
U2AF1-204ENST00000459639 MT1LQ93083 61 aa8.71□□□□□ -1.02
U2AF1-204ENST00000459639 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
U2AF1-204ENST00000459639 KRTAP19-4Q3LI73 84 aa8.65□□□□□ -1.02
U2AF1-204ENST00000459639 LCE3CQ5T5A8 94 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms