RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
PDGFB-204ENST00000455790 H0Y9P7 68 aa5.2□□□□□ -1.58
PDGFB-204ENST00000455790 ACYP1P07311 99 aa5.2□□□□□ -1.58
PDGFB-204ENST00000455790 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
PDGFB-204ENST00000455790 ATP5EP2Q5VTU8 51 aa5.2□□□□□ -1.58
PDGFB-204ENST00000455790 FAM240AA0A1B0GVK7 77 aa5.19□□□□□ -1.58
PDGFB-204ENST00000455790 UQCRQO14949 82 aa5.19□□□□□ -1.58
PDGFB-204ENST00000455790 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
PDGFB-204ENST00000455790 IMUPQ9GZP8 106 aa5.16□□□□□ -1.58
PDGFB-204ENST00000455790 ATOX1O00244 68 aa5.15□□□□□ -1.59
PDGFB-204ENST00000455790 NDUFC1O43677 76 aa5.15□□□□□ -1.59
PDGFB-204ENST00000455790 H0YAA0 97 aa5.14□□□□□ -1.59
PDGFB-204ENST00000455790 KMT2DO14686 5537 aa5.13□□□□□ -1.59
PDGFB-204ENST00000455790 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
PDGFB-204ENST00000455790 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
PDGFB-204ENST00000455790 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
PDGFB-204ENST00000455790 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
PDGFB-204ENST00000455790 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
PDGFB-204ENST00000455790 A8MUN3 132 aa5.09□□□□□ -1.59
PDGFB-204ENST00000455790 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
PDGFB-204ENST00000455790 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
PDGFB-204ENST00000455790 PCP4P48539 62 aa5.05□□□□□ -1.6
PDGFB-204ENST00000455790 MT1XP80297 61 aa5.05□□□□□ -1.6
PDGFB-204ENST00000455790 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
PDGFB-204ENST00000455790 A0A1B0GV90 55 aa5.04□□□□□ -1.6
PDGFB-204ENST00000455790 MP68P56378 58 aa5.02□□□□□ -1.61
PDGFB-204ENST00000455790 P0C880 135 aa5.01□□□□□ -1.61
PDGFB-204ENST00000455790 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
PDGFB-204ENST00000455790 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
PDGFB-204ENST00000455790 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
PDGFB-204ENST00000455790 R4GN34 69 aa4.96□□□□□ -1.62
PDGFB-204ENST00000455790 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
PDGFB-204ENST00000455790 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
PDGFB-204ENST00000455790 M0QZ58 72 aa4.94□□□□□ -1.62
PDGFB-204ENST00000455790 H3BPC8 53 aa4.93□□□□□ -1.62
PDGFB-204ENST00000455790 SPRR2EP22531 72 aa4.91□□□□□ -1.62
PDGFB-204ENST00000455790 SPRR2BP35325 72 aa4.91□□□□□ -1.62
PDGFB-204ENST00000455790 SPRR2AP35326 72 aa4.91□□□□□ -1.62
PDGFB-204ENST00000455790 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
PDGFB-204ENST00000455790 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
PDGFB-204ENST00000455790 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
PDGFB-204ENST00000455790 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
PDGFB-204ENST00000455790 SCGB1A1P11684 91 aa4.88□□□□□ -1.63
PDGFB-204ENST00000455790 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
PDGFB-204ENST00000455790 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
PDGFB-204ENST00000455790 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
PDGFB-204ENST00000455790 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
PDGFB-204ENST00000455790 J3QR89 54 aa4.85□□□□□ -1.63
PDGFB-204ENST00000455790 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
PDGFB-204ENST00000455790 TRAV7A0A075B6U4 112 aa4.82□□□□□ -1.64
PDGFB-204ENST00000455790 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
PDGFB-204ENST00000455790 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
PDGFB-204ENST00000455790 ACYP2P14621 99 aa4.77□□□□□ -1.65
PDGFB-204ENST00000455790 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
PDGFB-204ENST00000455790 SPRR2DP22532 72 aa4.75□□□□□ -1.65
PDGFB-204ENST00000455790 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
PDGFB-204ENST00000455790 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
PDGFB-204ENST00000455790 SMIM20Q8N5G0 67 aa4.7□□□□□ -1.66
PDGFB-204ENST00000455790 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
PDGFB-204ENST00000455790 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
PDGFB-204ENST00000455790 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
PDGFB-204ENST00000455790 K7ERU9 68 aa4.69□□□□□ -1.66
PDGFB-204ENST00000455790 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
PDGFB-204ENST00000455790 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
PDGFB-204ENST00000455790 SPANXA2-OT1Q8N9U9 137 aa4.6□□□□□ -1.67
PDGFB-204ENST00000455790 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
PDGFB-204ENST00000455790 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
PDGFB-204ENST00000455790 COA5Q86WW8 74 aa4.52□□□□□ -1.69
PDGFB-204ENST00000455790 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
PDGFB-204ENST00000455790 A0A0D9SG42 100 aa4.48□□□□□ -1.69
PDGFB-204ENST00000455790 MT1EP04732 61 aa4.47□□□□□ -1.69
PDGFB-204ENST00000455790 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
PDGFB-204ENST00000455790 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
PDGFB-204ENST00000455790 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
PDGFB-204ENST00000455790 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
PDGFB-204ENST00000455790 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
PDGFB-204ENST00000455790 ANAPC13Q9BS18 74 aa4.41□□□□□ -1.7
PDGFB-204ENST00000455790 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
PDGFB-204ENST00000455790 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.7
PDGFB-204ENST00000455790 SEC61GP60059 68 aa4.4□□□□□ -1.71
PDGFB-204ENST00000455790 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
PDGFB-204ENST00000455790 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
PDGFB-204ENST00000455790 A0A1B0GU33 70 aa4.38□□□□□ -1.71
PDGFB-204ENST00000455790 COX7CP15954 63 aa4.38□□□□□ -1.71
PDGFB-204ENST00000455790 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PDGFB-204ENST00000455790 H7BZZ5 65 aa4.36□□□□□ -1.71
PDGFB-204ENST00000455790 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
PDGFB-204ENST00000455790 CCDC179H3BU77 68 aa4.3□□□□□ -1.72
PDGFB-204ENST00000455790 A8MU10 97 aa4.29□□□□□ -1.72
PDGFB-204ENST00000455790 MT1GP13640 62 aa4.29□□□□□ -1.72
PDGFB-204ENST00000455790 MT1MQ8N339 61 aa4.26□□□□□ -1.73
PDGFB-204ENST00000455790 MT1LQ93083 61 aa4.26□□□□□ -1.73
PDGFB-204ENST00000455790 A0A1B0GU69 56 aa4.25□□□□□ -1.73
PDGFB-204ENST00000455790 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
PDGFB-204ENST00000455790 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
PDGFB-204ENST00000455790 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
PDGFB-204ENST00000455790 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
PDGFB-204ENST00000455790 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
PDGFB-204ENST00000455790 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
PDGFB-204ENST00000455790 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms