RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ATOX1O00244 68 aa4.34□□□□□ -1.71
USP54-207ENST00000451492 MT1BP07438 61 aa4.34□□□□□ -1.71
USP54-207ENST00000451492 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
USP54-207ENST00000451492 A6NN06 94 aa4.32□□□□□ -1.72
USP54-207ENST00000451492 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
USP54-207ENST00000451492 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
USP54-207ENST00000451492 NDUFC1O43677 76 aa4.29□□□□□ -1.72
USP54-207ENST00000451492 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
USP54-207ENST00000451492 MP68P56378 58 aa4.28□□□□□ -1.72
USP54-207ENST00000451492 IMUPQ9GZP8 106 aa4.27□□□□□ -1.73
USP54-207ENST00000451492 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
USP54-207ENST00000451492 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
USP54-207ENST00000451492 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
USP54-207ENST00000451492 A8MUN3 132 aa4.24□□□□□ -1.73
USP54-207ENST00000451492 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
USP54-207ENST00000451492 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
USP54-207ENST00000451492 J3QR89 54 aa4.22□□□□□ -1.73
USP54-207ENST00000451492 H0YAA0 97 aa4.21□□□□□ -1.74
USP54-207ENST00000451492 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
USP54-207ENST00000451492 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
USP54-207ENST00000451492 H3BPC8 53 aa4.16□□□□□ -1.74
USP54-207ENST00000451492 P0C880 135 aa4.14□□□□□ -1.75
USP54-207ENST00000451492 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
USP54-207ENST00000451492 R4GN34 69 aa4.14□□□□□ -1.75
USP54-207ENST00000451492 M0QZ58 72 aa4.12□□□□□ -1.75
USP54-207ENST00000451492 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
USP54-207ENST00000451492 KMT2DO14686 5537 aa4.11□□□□□ -1.75
USP54-207ENST00000451492 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
USP54-207ENST00000451492 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
USP54-207ENST00000451492 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
USP54-207ENST00000451492 NEBP20929 6669 aa4.1□□□□□ -1.75
USP54-207ENST00000451492 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
USP54-207ENST00000451492 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
USP54-207ENST00000451492 MT1XP80297 61 aa4.07□□□□□ -1.76
USP54-207ENST00000451492 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
USP54-207ENST00000451492 K7ERU9 68 aa4.06□□□□□ -1.76
USP54-207ENST00000451492 ACYP2P14621 99 aa4.05□□□□□ -1.76
USP54-207ENST00000451492 KRTAP3-2Q9BYR7 98 aa4.05□□□□□ -1.76
USP54-207ENST00000451492 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
USP54-207ENST00000451492 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
USP54-207ENST00000451492 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
USP54-207ENST00000451492 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
USP54-207ENST00000451492 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
USP54-207ENST00000451492 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
USP54-207ENST00000451492 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
USP54-207ENST00000451492 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
USP54-207ENST00000451492 SPRR2EP22531 72 aa3.95□□□□□ -1.78
USP54-207ENST00000451492 SPRR2BP35325 72 aa3.95□□□□□ -1.78
USP54-207ENST00000451492 SPRR2AP35326 72 aa3.95□□□□□ -1.78
USP54-207ENST00000451492 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
USP54-207ENST00000451492 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
USP54-207ENST00000451492 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
USP54-207ENST00000451492 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
USP54-207ENST00000451492 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
USP54-207ENST00000451492 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
USP54-207ENST00000451492 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
USP54-207ENST00000451492 COA5Q86WW8 74 aa3.86□□□□□ -1.79
USP54-207ENST00000451492 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
USP54-207ENST00000451492 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
USP54-207ENST00000451492 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
USP54-207ENST00000451492 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
USP54-207ENST00000451492 SPRR2DP22532 72 aa3.82□□□□□ -1.8
USP54-207ENST00000451492 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
USP54-207ENST00000451492 A0A0D9SG42 100 aa3.79□□□□□ -1.8
USP54-207ENST00000451492 COX7CP15954 63 aa3.79□□□□□ -1.8
USP54-207ENST00000451492 SEC61GP60059 68 aa3.78□□□□□ -1.8
USP54-207ENST00000451492 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
USP54-207ENST00000451492 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
USP54-207ENST00000451492 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
USP54-207ENST00000451492 H7BZZ5 65 aa3.74□□□□□ -1.81
USP54-207ENST00000451492 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
USP54-207ENST00000451492 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
USP54-207ENST00000451492 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
USP54-207ENST00000451492 A0A1B0GU33 70 aa3.71□□□□□ -1.82
USP54-207ENST00000451492 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
USP54-207ENST00000451492 ANAPC13Q9BS18 74 aa3.68□□□□□ -1.82
USP54-207ENST00000451492 A0A1B0GU69 56 aa3.66□□□□□ -1.82
USP54-207ENST00000451492 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
USP54-207ENST00000451492 PCP4P48539 62 aa3.63□□□□□ -1.83
USP54-207ENST00000451492 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
USP54-207ENST00000451492 A8MU10 97 aa3.62□□□□□ -1.83
USP54-207ENST00000451492 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
USP54-207ENST00000451492 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
USP54-207ENST00000451492 MT1EP04732 61 aa3.6□□□□□ -1.83
USP54-207ENST00000451492 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
USP54-207ENST00000451492 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
USP54-207ENST00000451492 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
USP54-207ENST00000451492 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
USP54-207ENST00000451492 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
USP54-207ENST00000451492 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
USP54-207ENST00000451492 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
USP54-207ENST00000451492 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
USP54-207ENST00000451492 TNP1P09430 55 aa3.48□□□□□ -1.85
USP54-207ENST00000451492 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
USP54-207ENST00000451492 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
USP54-207ENST00000451492 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
USP54-207ENST00000451492 MT1GP13640 62 aa3.45□□□□□ -1.86
USP54-207ENST00000451492 TMEM258P61165 79 aa3.44□□□□□ -1.86
USP54-207ENST00000451492 MT1MQ8N339 61 aa3.44□□□□□ -1.86
USP54-207ENST00000451492 MT1LQ93083 61 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms