RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058		A0A1B0GU33	70 aa		8.8	□□□□□ -1
TOM1-210	ENST00000449058	H1FX-AS1	Q4G0G2	97 aa		8.79	□□□□□ -1
TOM1-210	ENST00000449058	XP32	Q5T750	250 aa		8.77	□□□□□ -1.01
TOM1-210	ENST00000449058	RYR1	P21817	5038 aa		8.77	□□□□□ -1.01
TOM1-210	ENST00000449058	KRTAP17-1	Q9BYP8	105 aa		8.77	□□□□□ -1.01
TOM1-210	ENST00000449058	CSAG1	Q6PB30	78 aa		8.75	□□□□□ -1.01
TOM1-210	ENST00000449058	DMBT1	Q9UGM3	2413 aa	Predicted RBP	8.7	□□□□□ -1.02
TOM1-210	ENST00000449058	MT1HL1	P0DM35	61 aa		8.69	□□□□□ -1.02
TOM1-210	ENST00000449058	KRTAP3-3	Q9BYR6	98 aa		8.69	□□□□□ -1.02
TOM1-210	ENST00000449058	EPPK1	P58107	5090 aa	Known RBP	8.65	□□□□□ -1.02
TOM1-210	ENST00000449058	KIAA1109	Q2LD37	5005 aa		8.64	□□□□□ -1.03
TOM1-210	ENST00000449058	KRTAP10-6	P60371	365 aa	Predicted RBP	8.59	□□□□□ -1.03
TOM1-210	ENST00000449058	MYCBP2	O75592	4640 aa		8.59	□□□□□ -1.03
TOM1-210	ENST00000449058		S4R3F8	94 aa		8.59	□□□□□ -1.03
TOM1-210	ENST00000449058	ROMO1	P60602	79 aa		8.56	□□□□□ -1.04
TOM1-210	ENST00000449058	KRTAP3-2	Q9BYR7	98 aa		8.55	□□□□□ -1.04
TOM1-210	ENST00000449058	TPRXL	Q17RH7	258 aa		8.49	□□□□□ -1.05
TOM1-210	ENST00000449058		K7ERS5	55 aa		8.48	□□□□□ -1.05
TOM1-210	ENST00000449058	KRTAP13-4	Q3LI77	160 aa		8.48	□□□□□ -1.05
TOM1-210	ENST00000449058		A0A0A0MQY5	61 aa		8.41	□□□□□ -1.06
TOM1-210	ENST00000449058		P0C880	135 aa		8.41	□□□□□ -1.06
TOM1-210	ENST00000449058	KRTAP25-1	Q3LHN0	102 aa		8.4	□□□□□ -1.06
TOM1-210	ENST00000449058	KRTAP4-5	Q9BYR2	181 aa		8.39	□□□□□ -1.07
TOM1-210	ENST00000449058	LRP2	P98164	4655 aa		8.37	□□□□□ -1.07
TOM1-210	ENST00000449058	LPA	P08519	4548 aa		8.35	□□□□□ -1.07
TOM1-210	ENST00000449058		A0A0D9SG42	100 aa		8.34	□□□□□ -1.07
TOM1-210	ENST00000449058	ABCA13	Q86UQ4	5058 aa		8.26	□□□□□ -1.09
TOM1-210	ENST00000449058	BIRC6	Q9NR09	4857 aa		8.22	□□□□□ -1.09
TOM1-210	ENST00000449058	CRIPT	Q9P021	101 aa		8.21	□□□□□ -1.1
TOM1-210	ENST00000449058	KRTAP12-2	P59991	146 aa		8.19	□□□□□ -1.1
TOM1-210	ENST00000449058	HERC2	O95714	4834 aa		8.17	□□□□□ -1.1
TOM1-210	ENST00000449058		M0QZ58	72 aa		8.17	□□□□□ -1.1
TOM1-210	ENST00000449058	KRTAP12-1	P59990	96 aa		8.15	□□□□□ -1.1
TOM1-210	ENST00000449058	SEC61B	P60468	96 aa	Known RBP	8.15	□□□□□ -1.1
TOM1-210	ENST00000449058	MUC17	Q685J3	4493 aa		8.08	□□□□□ -1.12
TOM1-210	ENST00000449058	SPINT4	Q6UDR6	99 aa		8.08	□□□□□ -1.12
TOM1-210	ENST00000449058		J3QL48	77 aa		8.06	□□□□□ -1.12
TOM1-210	ENST00000449058	KRTAP4-1	Q9BYQ7	146 aa		8.05	□□□□□ -1.12
TOM1-210	ENST00000449058	NDUFAF8	A1L188	74 aa		8.04	□□□□□ -1.12
TOM1-210	ENST00000449058	C10orf95	Q9H7T3	257 aa		7.97	□□□□□ -1.13
TOM1-210	ENST00000449058	KRTAP19-2	Q3LHN2	52 aa		7.95	□□□□□ -1.14
TOM1-210	ENST00000449058		R4GN34	69 aa		7.95	□□□□□ -1.14
TOM1-210	ENST00000449058	LOR	P23490	312 aa	Predicted RBP	7.89	□□□□□ -1.15
TOM1-210	ENST00000449058	PCLO	Q9Y6V0	5065 aa		7.88	□□□□□ -1.15
TOM1-210	ENST00000449058	KRTAP15-1	Q3LI76	137 aa		7.84	□□□□□ -1.15
TOM1-210	ENST00000449058	LUZP6	Q538Z0	58 aa		7.77	□□□□□ -1.17
TOM1-210	ENST00000449058	HERC1	Q15751	4861 aa		7.74	□□□□□ -1.17
TOM1-210	ENST00000449058	FLG	P20930	4061 aa	Predicted RBP	7.66	□□□□□ -1.18
TOM1-210	ENST00000449058	HMCN2	Q8NDA2	5059 aa		7.64	□□□□□ -1.19
TOM1-210	ENST00000449058	MUC2	Q02817	5179 aa		7.62	□□□□□ -1.19
TOM1-210	ENST00000449058	CAMK2N1	Q7Z7J9	78 aa		7.52	□□□□□ -1.21
TOM1-210	ENST00000449058	LCE2C	Q5TA81	110 aa		7.48	□□□□□ -1.21
TOM1-210	ENST00000449058	PP632	Q6XCG6	107 aa		7.4	□□□□□ -1.22
TOM1-210	ENST00000449058	PLAC4	Q8WY50	150 aa		7.33	□□□□□ -1.24
TOM1-210	ENST00000449058	UBR4	Q5T4S7	5183 aa		7.32	□□□□□ -1.24
TOM1-210	ENST00000449058	SPRR2G	Q9BYE4	73 aa		7.31	□□□□□ -1.24
TOM1-210	ENST00000449058	FAT4	Q6V0I7	4981 aa		7.27	□□□□□ -1.25
TOM1-210	ENST00000449058	KRTAP19-1	Q8IUB9	90 aa		7.26	□□□□□ -1.25
TOM1-210	ENST00000449058	TNP1	P09430	55 aa		7.26	□□□□□ -1.25
TOM1-210	ENST00000449058	MT1H	P80294	61 aa		7.26	□□□□□ -1.25
TOM1-210	ENST00000449058	RNF213	Q63HN8	5207 aa		7.24	□□□□□ -1.25
TOM1-210	ENST00000449058	KRTAP23-1	A1A580	65 aa		7.22	□□□□□ -1.25
TOM1-210	ENST00000449058		M0R2T5	61 aa		7.22	□□□□□ -1.25
TOM1-210	ENST00000449058	MT2A	P02795	61 aa		7.14	□□□□□ -1.27
TOM1-210	ENST00000449058	MT1F	P04733	61 aa		7.13	□□□□□ -1.27
TOM1-210	ENST00000449058	KRTAP9-8	Q9BYQ0	159 aa		7.1	□□□□□ -1.27
TOM1-210	ENST00000449058	KRTAP10-10	P60014	251 aa		7.09	□□□□□ -1.28
TOM1-210	ENST00000449058	KRTAP19-8	Q3LI54	63 aa		7.01	□□□□□ -1.29
TOM1-210	ENST00000449058	SPRR5	A0A1B0GTR4	108 aa		6.9	□□□□□ -1.3
TOM1-210	ENST00000449058	MT1B	P07438	61 aa		6.9	□□□□□ -1.31
TOM1-210	ENST00000449058	LCE3A	Q5TA76	89 aa		6.89	□□□□□ -1.31
TOM1-210	ENST00000449058	KRTAP10-5	P60370	271 aa		6.84	□□□□□ -1.31
TOM1-210	ENST00000449058	MT1X	P80297	61 aa		6.83	□□□□□ -1.32
TOM1-210	ENST00000449058	KRTAP9-3	Q9BYQ3	159 aa		6.81	□□□□□ -1.32
TOM1-210	ENST00000449058	KRTAP8-1	Q8IUC2	63 aa		6.76	□□□□□ -1.33
TOM1-210	ENST00000449058	PRO2289	Q9P1D8	64 aa		6.73	□□□□□ -1.33
TOM1-210	ENST00000449058	LCE2A	Q5TA79	106 aa	Predicted RBP	6.71	□□□□□ -1.34
TOM1-210	ENST00000449058	KRTAP10-12	P60413	245 aa		6.65	□□□□□ -1.34
TOM1-210	ENST00000449058	KRTAP10-7	P60409	375 aa	Predicted RBP	6.61	□□□□□ -1.35
TOM1-210	ENST00000449058	KRTAP12-3	P60328	96 aa		6.57	□□□□□ -1.36
TOM1-210	ENST00000449058	LCE2B	O14633	110 aa		6.53	□□□□□ -1.36
TOM1-210	ENST00000449058	INE1	O15225	51 aa		6.44	□□□□□ -1.38
TOM1-210	ENST00000449058	KRTAP19-5	Q3LI72	72 aa		6.32	□□□□□ -1.4
TOM1-210	ENST00000449058	USH2A	O75445	5202 aa		6.27	□□□□□ -1.41
TOM1-210	ENST00000449058	KRTAP4-8	A0A0G2JLE6	195 aa		6.2	□□□□□ -1.42
TOM1-210	ENST00000449058	LCE3C	Q5T5A8	94 aa		6.2	□□□□□ -1.42
TOM1-210	ENST00000449058	KRTAP4-8	Q9BYQ9	185 aa		6.2	□□□□□ -1.42
TOM1-210	ENST00000449058	KMT2D	O14686	5537 aa		6.14	□□□□□ -1.43
TOM1-210	ENST00000449058	KRTAP19-7	Q3SYF9	63 aa		6.09	□□□□□ -1.43
TOM1-210	ENST00000449058	LCE2D	Q5TA82	110 aa	Predicted RBP	6.01	□□□□□ -1.45
TOM1-210	ENST00000449058	SSPO	A2VEC9	5147 aa		6	□□□□□ -1.45
TOM1-210	ENST00000449058	KRTAP9-6	A8MVA2	160 aa		5.96	□□□□□ -1.45
TOM1-210	ENST00000449058	FSIP2	Q5CZC0	6907 aa		5.96	□□□□□ -1.46
TOM1-210	ENST00000449058	KRTAP19-4	Q3LI73	84 aa		5.95	□□□□□ -1.46
TOM1-210	ENST00000449058	KRTAP19-6	Q3LI70	58 aa		5.93	□□□□□ -1.46
TOM1-210	ENST00000449058	MT1E	P04732	61 aa		5.92	□□□□□ -1.46
TOM1-210	ENST00000449058	MT1L	Q93083	61 aa		5.91	□□□□□ -1.46
TOM1-210	ENST00000449058	KRTAP4-7	Q9BYR0	210 aa		5.89	□□□□□ -1.47
TOM1-210	ENST00000449058	KRTAP2-3	P0C7H8	128 aa		5.75	□□□□□ -1.49
TOM1-210	ENST00000449058	KRTAP2-4	Q9BYR9	128 aa		5.75	□□□□□ -1.49

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