RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 FAT3Q8TDW7 4589 aa11.18□□□□□ -0.62
SKIDA1-201ENST00000444772 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
SKIDA1-201ENST00000444772 EPPK1P58107 5090 aaKnown RBP11.16□□□□□ -0.62
SKIDA1-201ENST00000444772 RYR1P21817 5038 aa11.15□□□□□ -0.62
SKIDA1-201ENST00000444772 TNXBP22105 4242 aa11.15□□□□□ -0.62
SKIDA1-201ENST00000444772 XP32Q5T750 250 aa11.15□□□□□ -0.62
SKIDA1-201ENST00000444772 Q5VSD8 79 aa11.15□□□□□ -0.62
SKIDA1-201ENST00000444772 KRTAP25-1Q3LHN0 102 aa11.14□□□□□ -0.63
SKIDA1-201ENST00000444772 KIAA1109Q2LD37 5005 aa11.13□□□□□ -0.63
SKIDA1-201ENST00000444772 KRTAP10-6P60371 365 aaPredicted RBP11.11□□□□□ -0.63
SKIDA1-201ENST00000444772 S4R3F8 94 aa11.1□□□□□ -0.63
SKIDA1-201ENST00000444772 KRTAP17-1Q9BYP8 105 aa11.08□□□□□ -0.64
SKIDA1-201ENST00000444772 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.64
SKIDA1-201ENST00000444772 LRP1Q07954 4544 aaKnown RBP11.02□□□□□ -0.64
SKIDA1-201ENST00000444772 DMBT1Q9UGM3 2413 aaPredicted RBP10.98□□□□□ -0.65
SKIDA1-201ENST00000444772 ROMO1P60602 79 aa10.97□□□□□ -0.65
SKIDA1-201ENST00000444772 KRTAP13-4Q3LI77 160 aa10.95□□□□□ -0.66
SKIDA1-201ENST00000444772 MT1HL1P0DM35 61 aa10.87□□□□□ -0.67
SKIDA1-201ENST00000444772 A0A0D9SG42 100 aa10.86□□□□□ -0.67
SKIDA1-201ENST00000444772 P0C880 135 aa10.84□□□□□ -0.67
SKIDA1-201ENST00000444772 MYCBP2O75592 4640 aa10.82□□□□□ -0.68
SKIDA1-201ENST00000444772 CRIPTQ9P021 101 aa10.78□□□□□ -0.68
SKIDA1-201ENST00000444772 TPRXLQ17RH7 258 aa10.77□□□□□ -0.69
SKIDA1-201ENST00000444772 KRTAP4-5Q9BYR2 181 aa10.73□□□□□ -0.69
SKIDA1-201ENST00000444772 M0QZ58 72 aa10.65□□□□□ -0.7
SKIDA1-201ENST00000444772 KRTAP12-2P59991 146 aa10.62□□□□□ -0.71
SKIDA1-201ENST00000444772 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
SKIDA1-201ENST00000444772 KRTAP12-1P59990 96 aa10.59□□□□□ -0.71
SKIDA1-201ENST00000444772 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
SKIDA1-201ENST00000444772 SPINT4Q6UDR6 99 aa10.53□□□□□ -0.72
SKIDA1-201ENST00000444772 HERC2O95714 4834 aa10.5□□□□□ -0.73
SKIDA1-201ENST00000444772 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
SKIDA1-201ENST00000444772 LRP2P98164 4655 aa10.45□□□□□ -0.74
SKIDA1-201ENST00000444772 LPAP08519 4548 aa10.44□□□□□ -0.74
SKIDA1-201ENST00000444772 C10orf95Q9H7T3 257 aa10.43□□□□□ -0.74
SKIDA1-201ENST00000444772 SEC61BP60468 96 aaKnown RBP10.37□□□□□ -0.75
SKIDA1-201ENST00000444772 R4GN34 69 aa10.3□□□□□ -0.76
SKIDA1-201ENST00000444772 J3QL48 77 aa10.27□□□□□ -0.77
SKIDA1-201ENST00000444772 KRTAP15-1Q3LI76 137 aa10.16□□□□□ -0.78
SKIDA1-201ENST00000444772 PCLOQ9Y6V0 5065 aa10.14□□□□□ -0.79
SKIDA1-201ENST00000444772 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
SKIDA1-201ENST00000444772 KRTAP4-1Q9BYQ7 146 aa10.07□□□□□ -0.8
SKIDA1-201ENST00000444772 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
SKIDA1-201ENST00000444772 HERC1Q15751 4861 aa10.01□□□□□ -0.81
SKIDA1-201ENST00000444772 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
SKIDA1-201ENST00000444772 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
SKIDA1-201ENST00000444772 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
SKIDA1-201ENST00000444772 PP632Q6XCG6 107 aa9.78□□□□□ -0.84
SKIDA1-201ENST00000444772 CAMK2N1Q7Z7J9 78 aa9.78□□□□□ -0.84
SKIDA1-201ENST00000444772 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
SKIDA1-201ENST00000444772 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.86
SKIDA1-201ENST00000444772 MUC2Q02817 5179 aa9.63□□□□□ -0.87
SKIDA1-201ENST00000444772 KRTAP23-1A1A580 65 aa9.49□□□□□ -0.89
SKIDA1-201ENST00000444772 TNP1P09430 55 aa9.47□□□□□ -0.89
SKIDA1-201ENST00000444772 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
SKIDA1-201ENST00000444772 LUZP6Q538Z0 58 aa9.33□□□□□ -0.92
SKIDA1-201ENST00000444772 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
SKIDA1-201ENST00000444772 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
SKIDA1-201ENST00000444772 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
SKIDA1-201ENST00000444772 FAT4Q6V0I7 4981 aa9.25□□□□□ -0.93
SKIDA1-201ENST00000444772 KRTAP19-1Q8IUB9 90 aa9.18□□□□□ -0.94
SKIDA1-201ENST00000444772 M0R2T5 61 aa9.11□□□□□ -0.95
SKIDA1-201ENST00000444772 SPRR5A0A1B0GTR4 108 aa9.09□□□□□ -0.95
SKIDA1-201ENST00000444772 MT1HP80294 61 aa9.07□□□□□ -0.96
SKIDA1-201ENST00000444772 MT2AP02795 61 aa8.96□□□□□ -0.98
SKIDA1-201ENST00000444772 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
SKIDA1-201ENST00000444772 MT1FP04733 61 aa8.94□□□□□ -0.98
SKIDA1-201ENST00000444772 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
SKIDA1-201ENST00000444772 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
SKIDA1-201ENST00000444772 LCE3AQ5TA76 89 aa8.87□□□□□ -0.99
SKIDA1-201ENST00000444772 KRTAP8-1Q8IUC2 63 aa8.74□□□□□ -1.01
SKIDA1-201ENST00000444772 MT1BP07438 61 aa8.69□□□□□ -1.02
SKIDA1-201ENST00000444772 KRTAP10-5P60370 271 aa8.67□□□□□ -1.02
SKIDA1-201ENST00000444772 MT1XP80297 61 aa8.65□□□□□ -1.02
SKIDA1-201ENST00000444772 KRTAP10-12P60413 245 aa8.55□□□□□ -1.04
SKIDA1-201ENST00000444772 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
SKIDA1-201ENST00000444772 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
SKIDA1-201ENST00000444772 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
SKIDA1-201ENST00000444772 PRO2289Q9P1D8 64 aa8.44□□□□□ -1.06
SKIDA1-201ENST00000444772 KRTAP10-7P60409 375 aaPredicted RBP8.37□□□□□ -1.07
SKIDA1-201ENST00000444772 LCE2BO14633 110 aa8.12□□□□□ -1.11
SKIDA1-201ENST00000444772 INE1O15225 51 aa8.12□□□□□ -1.11
SKIDA1-201ENST00000444772 KRTAP19-5Q3LI72 72 aa8.06□□□□□ -1.12
SKIDA1-201ENST00000444772 USH2AO75445 5202 aa8.02□□□□□ -1.12
SKIDA1-201ENST00000444772 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
SKIDA1-201ENST00000444772 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
SKIDA1-201ENST00000444772 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
SKIDA1-201ENST00000444772 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
SKIDA1-201ENST00000444772 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
SKIDA1-201ENST00000444772 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
SKIDA1-201ENST00000444772 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.18
SKIDA1-201ENST00000444772 KMT2DO14686 5537 aa7.63□□□□□ -1.19
SKIDA1-201ENST00000444772 KRTAP9-6A8MVA2 160 aa7.63□□□□□ -1.19
SKIDA1-201ENST00000444772 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
SKIDA1-201ENST00000444772 MT1LQ93083 61 aa7.51□□□□□ -1.21
SKIDA1-201ENST00000444772 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
SKIDA1-201ENST00000444772 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
SKIDA1-201ENST00000444772 KRTAP2-1Q9BYU5 128 aa7.5□□□□□ -1.21
SKIDA1-201ENST00000444772 MT1EP04732 61 aa7.5□□□□□ -1.21
SKIDA1-201ENST00000444772 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms