RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
ATPAF2-201ENST00000444058 H0Y9P7 68 aa8.53□□□□□ -1.04
ATPAF2-201ENST00000444058 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.05
ATPAF2-201ENST00000444058 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
ATPAF2-201ENST00000444058 KLKP1Q107X0 134 aa8.48□□□□□ -1.05
ATPAF2-201ENST00000444058 MT-ATP8P03928 68 aa8.46□□□□□ -1.06
ATPAF2-201ENST00000444058 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
ATPAF2-201ENST00000444058 Q5VV11 94 aa8.44□□□□□ -1.06
ATPAF2-201ENST00000444058 A8MUN3 132 aa8.43□□□□□ -1.06
ATPAF2-201ENST00000444058 MT1BP07438 61 aa8.43□□□□□ -1.06
ATPAF2-201ENST00000444058 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
ATPAF2-201ENST00000444058 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
ATPAF2-201ENST00000444058 NDUFC1O43677 76 aa8.41□□□□□ -1.06
ATPAF2-201ENST00000444058 LINC00208Q96KT6 92 aa8.4□□□□□ -1.06
ATPAF2-201ENST00000444058 MP68P56378 58 aa8.39□□□□□ -1.07
ATPAF2-201ENST00000444058 H0YAA0 97 aa8.38□□□□□ -1.07
ATPAF2-201ENST00000444058 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
ATPAF2-201ENST00000444058 A6NN06 94 aa8.34□□□□□ -1.07
ATPAF2-201ENST00000444058 KRTAP6-3Q3LI67 103 aa8.31□□□□□ -1.08
ATPAF2-201ENST00000444058 H3BPC8 53 aa8.3□□□□□ -1.08
ATPAF2-201ENST00000444058 SMIM20Q8N5G0 67 aa8.26□□□□□ -1.09
ATPAF2-201ENST00000444058 KRTAP10-5P60370 271 aa8.25□□□□□ -1.09
ATPAF2-201ENST00000444058 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
ATPAF2-201ENST00000444058 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
ATPAF2-201ENST00000444058 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
ATPAF2-201ENST00000444058 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
ATPAF2-201ENST00000444058 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
ATPAF2-201ENST00000444058 NEBP20929 6669 aa8.05□□□□□ -1.12
ATPAF2-201ENST00000444058 R4GN34 69 aa8.02□□□□□ -1.13
ATPAF2-201ENST00000444058 P0C880 135 aa8□□□□□ -1.13
ATPAF2-201ENST00000444058 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
ATPAF2-201ENST00000444058 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
ATPAF2-201ENST00000444058 ACYP2P14621 99 aa7.97□□□□□ -1.13
ATPAF2-201ENST00000444058 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
ATPAF2-201ENST00000444058 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
ATPAF2-201ENST00000444058 KRTAP5-9P26371 169 aa7.95□□□□□ -1.14
ATPAF2-201ENST00000444058 M0QZ58 72 aa7.94□□□□□ -1.14
ATPAF2-201ENST00000444058 COX7CP15954 63 aa7.94□□□□□ -1.14
ATPAF2-201ENST00000444058 MUC12Q9UKN1 5478 aa7.93□□□□□ -1.14
ATPAF2-201ENST00000444058 MT1XP80297 61 aa7.91□□□□□ -1.14
ATPAF2-201ENST00000444058 SPTSSBQ8NFR3 76 aa7.89□□□□□ -1.15
ATPAF2-201ENST00000444058 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
ATPAF2-201ENST00000444058 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
ATPAF2-201ENST00000444058 KMT2DO14686 5537 aa7.82□□□□□ -1.16
ATPAF2-201ENST00000444058 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
ATPAF2-201ENST00000444058 LINC01554Q52M75 96 aa7.79□□□□□ -1.16
ATPAF2-201ENST00000444058 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
ATPAF2-201ENST00000444058 H7BZZ5 65 aa7.74□□□□□ -1.17
ATPAF2-201ENST00000444058 CYSTM1Q9H1C7 97 aa7.74□□□□□ -1.17
ATPAF2-201ENST00000444058 MDN1Q9NU22 5596 aa7.69□□□□□ -1.18
ATPAF2-201ENST00000444058 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
ATPAF2-201ENST00000444058 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
ATPAF2-201ENST00000444058 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
ATPAF2-201ENST00000444058 KRTAP20-1Q3LI63 56 aa7.65□□□□□ -1.18
ATPAF2-201ENST00000444058 COA5Q86WW8 74 aa7.6□□□□□ -1.19
ATPAF2-201ENST00000444058 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 SPRR2EP22531 72 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 SPRR2BP35325 72 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 SPRR2AP35326 72 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
ATPAF2-201ENST00000444058 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
ATPAF2-201ENST00000444058 ATP5EP56381 51 aaPredicted RBP7.51□□□□□ -1.21
ATPAF2-201ENST00000444058 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
ATPAF2-201ENST00000444058 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
ATPAF2-201ENST00000444058 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
ATPAF2-201ENST00000444058 LCE1AQ5T7P2 110 aa7.48□□□□□ -1.21
ATPAF2-201ENST00000444058 TMEM258P61165 79 aa7.44□□□□□ -1.22
ATPAF2-201ENST00000444058 SEC61GP60059 68 aa7.41□□□□□ -1.22
ATPAF2-201ENST00000444058 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
ATPAF2-201ENST00000444058 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
ATPAF2-201ENST00000444058 SPRR2DP22532 72 aa7.3□□□□□ -1.24
ATPAF2-201ENST00000444058 A0A1B0GU33 70 aa7.27□□□□□ -1.25
ATPAF2-201ENST00000444058 KRTAP2-2Q9BYT5 123 aa7.25□□□□□ -1.25
ATPAF2-201ENST00000444058 KRTAP2-1Q9BYU5 128 aa7.25□□□□□ -1.25
ATPAF2-201ENST00000444058 A0A0D9SG42 100 aa7.23□□□□□ -1.25
ATPAF2-201ENST00000444058 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
ATPAF2-201ENST00000444058 A0A1B0GU69 56 aa7.2□□□□□ -1.26
ATPAF2-201ENST00000444058 PCP4P48539 62 aa7.19□□□□□ -1.26
ATPAF2-201ENST00000444058 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.26
ATPAF2-201ENST00000444058 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
ATPAF2-201ENST00000444058 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
ATPAF2-201ENST00000444058 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
ATPAF2-201ENST00000444058 PRR15LQ9BU68 103 aa7.11□□□□□ -1.27
ATPAF2-201ENST00000444058 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
ATPAF2-201ENST00000444058 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
ATPAF2-201ENST00000444058 MT1EP04732 61 aa7.01□□□□□ -1.29
ATPAF2-201ENST00000444058 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
ATPAF2-201ENST00000444058 A8MU10 97 aa6.96□□□□□ -1.3
ATPAF2-201ENST00000444058 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
ATPAF2-201ENST00000444058 V9GYY9 64 aa6.96□□□□□ -1.3
ATPAF2-201ENST00000444058 Q1T7F1 81 aa6.93□□□□□ -1.3
ATPAF2-201ENST00000444058 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
ATPAF2-201ENST00000444058 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
ATPAF2-201ENST00000444058 UQCR11O14957 56 aa6.88□□□□□ -1.31
ATPAF2-201ENST00000444058 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
ATPAF2-201ENST00000444058 MT1GP13640 62 aa6.83□□□□□ -1.32
ATPAF2-201ENST00000444058 PSPHP1O15172 72 aa6.82□□□□□ -1.32
ATPAF2-201ENST00000444058 TNP1P09430 55 aa6.82□□□□□ -1.32
ATPAF2-201ENST00000444058 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms