RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 Q5VSD8 79 aa1.36□□□□□ -2.19
TM9SF3-202ENST00000443638 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
TM9SF3-202ENST00000443638 DEFB106AQ8N104 65 aa1.35□□□□□ -2.19
TM9SF3-202ENST00000443638 STARD9Q9P2P6 4700 aa1.35□□□□□ -2.19
TM9SF3-202ENST00000443638 PLECQ15149 4684 aaKnown RBP1.35□□□□□ -2.19
TM9SF3-202ENST00000443638 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.2
TM9SF3-202ENST00000443638 PKHD1P08F94 4074 aa1.34□□□□□ -2.2
TM9SF3-202ENST00000443638 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.2
TM9SF3-202ENST00000443638 LYNX1G3V0Z9 82 aa1.33□□□□□ -2.2
TM9SF3-202ENST00000443638 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
TM9SF3-202ENST00000443638 IGIPA6NJ69 53 aa1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 NDUFA3O95167 84 aa1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 SPRR1AP35321 89 aa1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 CRIP1P50238 77 aa1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 CMC2Q9NRP2 79 aa1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 SRRM2Q9UQ35 2752 aaKnown RBP1.32□□□□□ -2.2
TM9SF3-202ENST00000443638 PRH1P02810 166 aa1.31□□□□□ -2.2
TM9SF3-202ENST00000443638 CDKN2A-AS1Q9UH64 79 aa1.31□□□□□ -2.2
TM9SF3-202ENST00000443638 VPS13DQ5THJ4 4388 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 DNAH11Q96DT5 4516 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 H0YGG7 62 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 SPRR1BP22528 89 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 PLNP26678 52 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
TM9SF3-202ENST00000443638 DEFB105AQ8NG35 78 aa1.29□□□□□ -2.2
TM9SF3-202ENST00000443638 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
TM9SF3-202ENST00000443638 HMCN2Q8NDA2 5059 aa1.29□□□□□ -2.2
TM9SF3-202ENST00000443638 RNF213Q63HN8 5207 aa1.28□□□□□ -2.2
TM9SF3-202ENST00000443638 LINC00158P58513 81 aa1.28□□□□□ -2.2
TM9SF3-202ENST00000443638 PKD1P98161 4303 aa1.28□□□□□ -2.21
TM9SF3-202ENST00000443638 DNAH17Q9UFH2 4485 aa1.28□□□□□ -2.21
TM9SF3-202ENST00000443638 MUC2Q02817 5179 aa1.28□□□□□ -2.21
TM9SF3-202ENST00000443638 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
TM9SF3-202ENST00000443638 LELP1Q5T871 98 aa1.27□□□□□ -2.21
TM9SF3-202ENST00000443638 DEFB108BQ8NET1 73 aa1.27□□□□□ -2.21
TM9SF3-202ENST00000443638 DNAH6Q9C0G6 4158 aa1.27□□□□□ -2.21
TM9SF3-202ENST00000443638 FAT1Q14517 4588 aa1.27□□□□□ -2.21
TM9SF3-202ENST00000443638 TOMM5Q8N4H5 51 aa1.26□□□□□ -2.21
TM9SF3-202ENST00000443638 APOBP04114 4563 aaKnown RBP1.26□□□□□ -2.21
TM9SF3-202ENST00000443638 FAT4Q6V0I7 4981 aa1.25□□□□□ -2.21
TM9SF3-202ENST00000443638 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
TM9SF3-202ENST00000443638 LRP1BQ9NZR2 4599 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 H0YAA0 97 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 H0YGX0 51 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 WFDC13Q8IUB5 93 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 VPS13BQ7Z7G8 4022 aa1.24□□□□□ -2.21
TM9SF3-202ENST00000443638 ABRACLQ9P1F3 81 aa1.23□□□□□ -2.21
TM9SF3-202ENST00000443638 LRP2P98164 4655 aa1.22□□□□□ -2.21
TM9SF3-202ENST00000443638 SMR3BP02814 79 aaPredicted RBP1.22□□□□□ -2.21
TM9SF3-202ENST00000443638 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
TM9SF3-202ENST00000443638 SMIM27A0A1W2PRY6 76 aa1.21□□□□□ -2.22
TM9SF3-202ENST00000443638 SPINK4O60575 86 aa1.21□□□□□ -2.22
TM9SF3-202ENST00000443638 KLK9Q2XQG4 91 aa1.21□□□□□ -2.22
TM9SF3-202ENST00000443638 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
TM9SF3-202ENST00000443638 DNAH5Q8TE73 4624 aa1.2□□□□□ -2.22
TM9SF3-202ENST00000443638 TMEM167BQ9NRX6 74 aa1.2□□□□□ -2.22
TM9SF3-202ENST00000443638 LRP1Q07954 4544 aaKnown RBP1.19□□□□□ -2.22
TM9SF3-202ENST00000443638 H3BSH0 61 aa1.19□□□□□ -2.22
TM9SF3-202ENST00000443638 MINOS1Q5TGZ0 78 aa1.19□□□□□ -2.22
TM9SF3-202ENST00000443638 H3BUX3 64 aa1.18□□□□□ -2.22
TM9SF3-202ENST00000443638 TNXBP22105 4242 aa1.17□□□□□ -2.22
TM9SF3-202ENST00000443638 LINC01546A6NGU7 62 aa1.17□□□□□ -2.22
TM9SF3-202ENST00000443638 IAPPP10997 89 aa1.17□□□□□ -2.22
TM9SF3-202ENST00000443638 DEFB136Q30KP8 78 aa1.17□□□□□ -2.22
TM9SF3-202ENST00000443638 FAT3Q8TDW7 4589 aa1.16□□□□□ -2.22
TM9SF3-202ENST00000443638 LPAP08519 4548 aa1.15□□□□□ -2.22
TM9SF3-202ENST00000443638 MT1HL1P0DM35 61 aa1.15□□□□□ -2.23
TM9SF3-202ENST00000443638 LINC00308Q8TCZ7 52 aa1.15□□□□□ -2.23
TM9SF3-202ENST00000443638 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.23
TM9SF3-202ENST00000443638 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
TM9SF3-202ENST00000443638 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
TM9SF3-202ENST00000443638 TIMM8BQ9Y5J9 83 aaPredicted RBP1.14□□□□□ -2.23
TM9SF3-202ENST00000443638 DEFB4AO15263 64 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 DEFB104AQ8WTQ1 72 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
TM9SF3-202ENST00000443638 SPINK6Q6UWN8 80 aa1.1□□□□□ -2.23
TM9SF3-202ENST00000443638 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
TM9SF3-202ENST00000443638 SSPOA2VEC9 5147 aa1.09□□□□□ -2.23
TM9SF3-202ENST00000443638 RPS27P42677 84 aaKnown RBP1.09□□□□□ -2.23
TM9SF3-202ENST00000443638 RPS27LQ71UM5 84 aaKnown RBP1.09□□□□□ -2.23
TM9SF3-202ENST00000443638 DEFB135Q30KP9 77 aa1.08□□□□□ -2.24
TM9SF3-202ENST00000443638 DNAH8Q96JB1 4490 aa1.08□□□□□ -2.24
TM9SF3-202ENST00000443638 SYNE2Q8WXH0 6885 aaKnown RBP1.07□□□□□ -2.24
TM9SF3-202ENST00000443638 NEBP20929 6669 aa1.07□□□□□ -2.24
TM9SF3-202ENST00000443638 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
TM9SF3-202ENST00000443638 GPR98Q8WXG9 6306 aa1.04□□□□□ -2.24
TM9SF3-202ENST00000443638 WT1-ASQ06250 92 aa1.04□□□□□ -2.24
TM9SF3-202ENST00000443638 KAAG1Q9UBP8 84 aa1.04□□□□□ -2.24
TM9SF3-202ENST00000443638 USH2AO75445 5202 aa1.03□□□□□ -2.24
TM9SF3-202ENST00000443638 HTN3P15516 51 aa1.02□□□□□ -2.25
TM9SF3-202ENST00000443638 SMIM2Q9BVW6 85 aa1.02□□□□□ -2.25
TM9SF3-202ENST00000443638 SPINK1P00995 79 aa1.01□□□□□ -2.25
TM9SF3-202ENST00000443638 H3BUA1 57 aa1□□□□□ -2.25
TM9SF3-202ENST00000443638 LEAP2Q969E1 77 aa1□□□□□ -2.25
TM9SF3-202ENST00000443638 KMT2DO14686 5537 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms