RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
CNOT1-202ENST00000441024 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
CNOT1-202ENST00000441024 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.85
CNOT1-202ENST00000441024 A8MU10 97 aa3.45□□□□□ -1.86
CNOT1-202ENST00000441024 LRP1BQ9NZR2 4599 aa3.44□□□□□ -1.86
CNOT1-202ENST00000441024 DMBT1Q9UGM3 2413 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-202ENST00000441024 STAB2Q8WWQ8 2551 aa3.44□□□□□ -1.86
CNOT1-202ENST00000441024 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
CNOT1-202ENST00000441024 XP32Q5T750 250 aa3.42□□□□□ -1.86
CNOT1-202ENST00000441024 H3BS24 57 aa3.4□□□□□ -1.87
CNOT1-202ENST00000441024 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
CNOT1-202ENST00000441024 FAT1Q14517 4588 aa3.38□□□□□ -1.87
CNOT1-202ENST00000441024 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
CNOT1-202ENST00000441024 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
CNOT1-202ENST00000441024 EPPK1P58107 5090 aaKnown RBP3.36□□□□□ -1.87
CNOT1-202ENST00000441024 TNP1P09430 55 aa3.35□□□□□ -1.87
CNOT1-202ENST00000441024 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
CNOT1-202ENST00000441024 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
CNOT1-202ENST00000441024 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
CNOT1-202ENST00000441024 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
CNOT1-202ENST00000441024 FLG2Q5D862 2391 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-202ENST00000441024 H0YAA0 97 aa3.31□□□□□ -1.88
CNOT1-202ENST00000441024 RYR1P21817 5038 aa3.28□□□□□ -1.88
CNOT1-202ENST00000441024 TGP01266 2768 aa3.27□□□□□ -1.89
CNOT1-202ENST00000441024 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
CNOT1-202ENST00000441024 ABCA13Q86UQ4 5058 aa3.26□□□□□ -1.89
CNOT1-202ENST00000441024 MYCBP2O75592 4640 aa3.25□□□□□ -1.89
CNOT1-202ENST00000441024 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CNOT1-202ENST00000441024 P0C880 135 aa3.21□□□□□ -1.9
CNOT1-202ENST00000441024 HERC2O95714 4834 aa3.21□□□□□ -1.9
CNOT1-202ENST00000441024 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
CNOT1-202ENST00000441024 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
CNOT1-202ENST00000441024 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
CNOT1-202ENST00000441024 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
CNOT1-202ENST00000441024 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
CNOT1-202ENST00000441024 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
CNOT1-202ENST00000441024 LRP1Q07954 4544 aaKnown RBP3.15□□□□□ -1.91
CNOT1-202ENST00000441024 KRTAP3-1Q9BYR8 98 aa3.13□□□□□ -1.91
CNOT1-202ENST00000441024 KRTAP10-4P60372 401 aaPredicted RBP3.12□□□□□ -1.91
CNOT1-202ENST00000441024 PCLOQ9Y6V0 5065 aa3.11□□□□□ -1.91
CNOT1-202ENST00000441024 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
CNOT1-202ENST00000441024 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
CNOT1-202ENST00000441024 LPAP08519 4548 aa3.09□□□□□ -1.91
CNOT1-202ENST00000441024 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.92
CNOT1-202ENST00000441024 SRRM2Q9UQ35 2752 aaKnown RBP3.09□□□□□ -1.92
CNOT1-202ENST00000441024 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
CNOT1-202ENST00000441024 LCE2BO14633 110 aa3.07□□□□□ -1.92
CNOT1-202ENST00000441024 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
CNOT1-202ENST00000441024 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
CNOT1-202ENST00000441024 MT1HL1P0DM35 61 aa3.03□□□□□ -1.92
CNOT1-202ENST00000441024 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
CNOT1-202ENST00000441024 LCE2CQ5TA81 110 aa2.98□□□□□ -1.93
CNOT1-202ENST00000441024 HERC1Q15751 4861 aa2.89□□□□□ -1.95
CNOT1-202ENST00000441024 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-202ENST00000441024 KRTAP4-5Q9BYR2 181 aa2.88□□□□□ -1.95
CNOT1-202ENST00000441024 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
CNOT1-202ENST00000441024 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
CNOT1-202ENST00000441024 LRP2P98164 4655 aa2.86□□□□□ -1.95
CNOT1-202ENST00000441024 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
CNOT1-202ENST00000441024 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CNOT1-202ENST00000441024 MUC2Q02817 5179 aa2.76□□□□□ -1.97
CNOT1-202ENST00000441024 INE1O15225 51 aa2.75□□□□□ -1.97
CNOT1-202ENST00000441024 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CNOT1-202ENST00000441024 LORP23490 312 aaPredicted RBP2.71□□□□□ -1.98
CNOT1-202ENST00000441024 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
CNOT1-202ENST00000441024 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
CNOT1-202ENST00000441024 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
CNOT1-202ENST00000441024 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.98
CNOT1-202ENST00000441024 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
CNOT1-202ENST00000441024 MT1HP80294 61 aa2.62□□□□□ -1.99
CNOT1-202ENST00000441024 FAT4Q6V0I7 4981 aa2.59□□□□□ -1.99
CNOT1-202ENST00000441024 MT2AP02795 61 aa2.59□□□□□ -2
CNOT1-202ENST00000441024 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
CNOT1-202ENST00000441024 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
CNOT1-202ENST00000441024 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
CNOT1-202ENST00000441024 MT1FP04733 61 aa2.52□□□□□ -2.01
CNOT1-202ENST00000441024 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
CNOT1-202ENST00000441024 KRTAP19-8Q3LI54 63 aa2.47□□□□□ -2.01
CNOT1-202ENST00000441024 KRTAP9-2Q9BYQ4 174 aa2.44□□□□□ -2.02
CNOT1-202ENST00000441024 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
CNOT1-202ENST00000441024 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
CNOT1-202ENST00000441024 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
CNOT1-202ENST00000441024 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
CNOT1-202ENST00000441024 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
CNOT1-202ENST00000441024 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
CNOT1-202ENST00000441024 USH2AO75445 5202 aa2.34□□□□□ -2.03
CNOT1-202ENST00000441024 MT1XP80297 61 aa2.34□□□□□ -2.03
CNOT1-202ENST00000441024 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
CNOT1-202ENST00000441024 MT1BP07438 61 aa2.34□□□□□ -2.04
CNOT1-202ENST00000441024 KRTAP9-8Q9BYQ0 159 aa2.34□□□□□ -2.04
CNOT1-202ENST00000441024 KRTAP9-3Q9BYQ3 159 aa2.29□□□□□ -2.04
CNOT1-202ENST00000441024 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
CNOT1-202ENST00000441024 MT1GP13640 62 aa2.23□□□□□ -2.05
CNOT1-202ENST00000441024 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.05
CNOT1-202ENST00000441024 SPRR2EP22531 72 aa2.21□□□□□ -2.06
CNOT1-202ENST00000441024 SPRR2BP35325 72 aa2.21□□□□□ -2.06
CNOT1-202ENST00000441024 SPRR2AP35326 72 aa2.21□□□□□ -2.06
CNOT1-202ENST00000441024 LCE4AQ5TA78 99 aa2.18□□□□□ -2.06
CNOT1-202ENST00000441024 KRTAP4-8A0A0G2JLE6 195 aa2.16□□□□□ -2.06
CNOT1-202ENST00000441024 KRTAP4-8Q9BYQ9 185 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms