RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 KRTAP4-1Q9BYQ7 146 aa9.79□□□□□ -0.84
SNX17-203ENST00000440760 KRTAP3-1Q9BYR8 98 aa9.78□□□□□ -0.84
SNX17-203ENST00000440760 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
SNX17-203ENST00000440760 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
SNX17-203ENST00000440760 ACYP2P14621 99 aa9.74□□□□□ -0.85
SNX17-203ENST00000440760 SEC61GP60059 68 aa9.73□□□□□ -0.85
SNX17-203ENST00000440760 A8MU10 97 aa9.72□□□□□ -0.85
SNX17-203ENST00000440760 A6NED7 52 aa9.7□□□□□ -0.86
SNX17-203ENST00000440760 LCA10Q71F78 164 aa9.7□□□□□ -0.86
SNX17-203ENST00000440760 MUC2Q02817 5179 aa9.7□□□□□ -0.86
SNX17-203ENST00000440760 CDC42SE1Q9NRR8 79 aa9.68□□□□□ -0.86
SNX17-203ENST00000440760 UBR4Q5T4S7 5183 aa9.68□□□□□ -0.86
SNX17-203ENST00000440760 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
SNX17-203ENST00000440760 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
SNX17-203ENST00000440760 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
SNX17-203ENST00000440760 A6NN06 94 aa9.57□□□□□ -0.88
SNX17-203ENST00000440760 RNF213Q63HN8 5207 aa9.56□□□□□ -0.88
SNX17-203ENST00000440760 H1FX-AS1Q4G0G2 97 aa9.51□□□□□ -0.89
SNX17-203ENST00000440760 KRTAP19-2Q3LHN2 52 aa9.47□□□□□ -0.89
SNX17-203ENST00000440760 S4R3F8 94 aa9.46□□□□□ -0.89
SNX17-203ENST00000440760 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
SNX17-203ENST00000440760 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
SNX17-203ENST00000440760 A0A1B0GU69 56 aa9.33□□□□□ -0.92
SNX17-203ENST00000440760 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
SNX17-203ENST00000440760 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
SNX17-203ENST00000440760 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
SNX17-203ENST00000440760 UQCR11O14957 56 aa9.22□□□□□ -0.93
SNX17-203ENST00000440760 CSAG1Q6PB30 78 aa9.21□□□□□ -0.93
SNX17-203ENST00000440760 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
SNX17-203ENST00000440760 MT1HP80294 61 aa9.09□□□□□ -0.95
SNX17-203ENST00000440760 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
SNX17-203ENST00000440760 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
SNX17-203ENST00000440760 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
SNX17-203ENST00000440760 P0C880 135 aa9.04□□□□□ -0.96
SNX17-203ENST00000440760 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
SNX17-203ENST00000440760 M0R2T5 61 aa9□□□□□ -0.97
SNX17-203ENST00000440760 H0YAA0 97 aa8.97□□□□□ -0.97
SNX17-203ENST00000440760 A0A1B0GU33 70 aa8.94□□□□□ -0.98
SNX17-203ENST00000440760 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
SNX17-203ENST00000440760 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
SNX17-203ENST00000440760 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
SNX17-203ENST00000440760 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
SNX17-203ENST00000440760 M0QZ58 72 aa8.73□□□□□ -1.01
SNX17-203ENST00000440760 MT2AP02795 61 aa8.73□□□□□ -1.01
SNX17-203ENST00000440760 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
SNX17-203ENST00000440760 R4GN34 69 aa8.72□□□□□ -1.01
SNX17-203ENST00000440760 A0A0D9SG42 100 aa8.7□□□□□ -1.02
SNX17-203ENST00000440760 MT1FP04733 61 aa8.7□□□□□ -1.02
SNX17-203ENST00000440760 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
SNX17-203ENST00000440760 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
SNX17-203ENST00000440760 K7ERS5 55 aa8.6□□□□□ -1.03
SNX17-203ENST00000440760 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
SNX17-203ENST00000440760 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
SNX17-203ENST00000440760 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
SNX17-203ENST00000440760 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
SNX17-203ENST00000440760 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
SNX17-203ENST00000440760 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.05
SNX17-203ENST00000440760 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
SNX17-203ENST00000440760 ROMO1P60602 79 aa8.41□□□□□ -1.06
SNX17-203ENST00000440760 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
SNX17-203ENST00000440760 H3BS24 57 aa8.24□□□□□ -1.09
SNX17-203ENST00000440760 LCE2BO14633 110 aa8.22□□□□□ -1.09
SNX17-203ENST00000440760 MT1BP07438 61 aa8.21□□□□□ -1.1
SNX17-203ENST00000440760 PLAC4Q8WY50 150 aa8.17□□□□□ -1.1
SNX17-203ENST00000440760 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
SNX17-203ENST00000440760 USH2AO75445 5202 aa8.11□□□□□ -1.11
SNX17-203ENST00000440760 C10orf95Q9H7T3 257 aa8.03□□□□□ -1.12
SNX17-203ENST00000440760 MT1XP80297 61 aa7.93□□□□□ -1.14
SNX17-203ENST00000440760 KRTAP10-5P60370 271 aa7.91□□□□□ -1.14
SNX17-203ENST00000440760 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
SNX17-203ENST00000440760 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
SNX17-203ENST00000440760 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
SNX17-203ENST00000440760 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
SNX17-203ENST00000440760 PRO2289Q9P1D8 64 aa7.75□□□□□ -1.17
SNX17-203ENST00000440760 TNP1P09430 55 aa7.73□□□□□ -1.17
SNX17-203ENST00000440760 KRTAP9-2Q9BYQ4 174 aa7.67□□□□□ -1.18
SNX17-203ENST00000440760 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
SNX17-203ENST00000440760 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
SNX17-203ENST00000440760 KRTAP10-7P60409 375 aaPredicted RBP7.65□□□□□ -1.18
SNX17-203ENST00000440760 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SNX17-203ENST00000440760 FCGBPQ9Y6R7 5405 aaPredicted RBP7.5□□□□□ -1.21
SNX17-203ENST00000440760 KMT2DO14686 5537 aa7.5□□□□□ -1.21
SNX17-203ENST00000440760 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
SNX17-203ENST00000440760 PP632Q6XCG6 107 aa7.46□□□□□ -1.21
SNX17-203ENST00000440760 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
SNX17-203ENST00000440760 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
SNX17-203ENST00000440760 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
SNX17-203ENST00000440760 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
SNX17-203ENST00000440760 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
SNX17-203ENST00000440760 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
SNX17-203ENST00000440760 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SNX17-203ENST00000440760 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
SNX17-203ENST00000440760 KRTAP12-3P60328 96 aa7.15□□□□□ -1.26
SNX17-203ENST00000440760 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
SNX17-203ENST00000440760 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
SNX17-203ENST00000440760 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
SNX17-203ENST00000440760 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
SNX17-203ENST00000440760 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
SNX17-203ENST00000440760 MT1EP04732 61 aa6.95□□□□□ -1.3
SNX17-203ENST00000440760 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms