RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 SPTSSBQ8NFR3 76 aa11.23□□□□□ -0.61
CDKN1C-204ENST00000440480 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
CDKN1C-204ENST00000440480 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
CDKN1C-204ENST00000440480 UBR4Q5T4S7 5183 aa11.2□□□□□ -0.62
CDKN1C-204ENST00000440480 A6NED7 52 aa11.19□□□□□ -0.62
CDKN1C-204ENST00000440480 A0A1B0GU69 56 aa11.17□□□□□ -0.62
CDKN1C-204ENST00000440480 COX6B2Q6YFQ2 88 aa11.14□□□□□ -0.63
CDKN1C-204ENST00000440480 KRTAP3-1Q9BYR8 98 aa11.08□□□□□ -0.64
CDKN1C-204ENST00000440480 CDC42SE1Q9NRR8 79 aa11.05□□□□□ -0.64
CDKN1C-204ENST00000440480 SEC61GP60059 68 aa11.04□□□□□ -0.64
CDKN1C-204ENST00000440480 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
CDKN1C-204ENST00000440480 LCA10Q71F78 164 aa10.98□□□□□ -0.65
CDKN1C-204ENST00000440480 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
CDKN1C-204ENST00000440480 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
CDKN1C-204ENST00000440480 UQCR11O14957 56 aa10.92□□□□□ -0.66
CDKN1C-204ENST00000440480 MUC2Q02817 5179 aa10.91□□□□□ -0.66
CDKN1C-204ENST00000440480 A8MU10 97 aa10.88□□□□□ -0.67
CDKN1C-204ENST00000440480 RBM12B-AS1Q9P1G2 102 aa10.83□□□□□ -0.68
CDKN1C-204ENST00000440480 SPATA8Q6RVD6 105 aa10.82□□□□□ -0.68
CDKN1C-204ENST00000440480 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
CDKN1C-204ENST00000440480 PMAIP1Q13794 54 aa10.8□□□□□ -0.68
CDKN1C-204ENST00000440480 S4R3F8 94 aa10.77□□□□□ -0.68
CDKN1C-204ENST00000440480 H1FX-AS1Q4G0G2 97 aa10.74□□□□□ -0.69
CDKN1C-204ENST00000440480 A0A1B0GU33 70 aa10.68□□□□□ -0.7
CDKN1C-204ENST00000440480 A6NN06 94 aa10.61□□□□□ -0.71
CDKN1C-204ENST00000440480 KRTAP19-2Q3LHN2 52 aa10.58□□□□□ -0.72
CDKN1C-204ENST00000440480 H0YAA0 97 aa10.51□□□□□ -0.73
CDKN1C-204ENST00000440480 CSAG1Q6PB30 78 aa10.5□□□□□ -0.73
CDKN1C-204ENST00000440480 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
CDKN1C-204ENST00000440480 FAT4Q6V0I7 4981 aa10.45□□□□□ -0.74
CDKN1C-204ENST00000440480 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
CDKN1C-204ENST00000440480 KRTAP10-6P60371 365 aaPredicted RBP10.44□□□□□ -0.74
CDKN1C-204ENST00000440480 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
CDKN1C-204ENST00000440480 K7ERS5 55 aa10.34□□□□□ -0.75
CDKN1C-204ENST00000440480 ADM2Q7Z4H4 148 aa10.33□□□□□ -0.76
CDKN1C-204ENST00000440480 P0C880 135 aa10.28□□□□□ -0.76
CDKN1C-204ENST00000440480 MT1HP80294 61 aa10.26□□□□□ -0.77
CDKN1C-204ENST00000440480 M0R2T5 61 aa10.23□□□□□ -0.77
CDKN1C-204ENST00000440480 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
CDKN1C-204ENST00000440480 M0QZ58 72 aa10.17□□□□□ -0.78
CDKN1C-204ENST00000440480 A0A0D9SG42 100 aa10.12□□□□□ -0.79
CDKN1C-204ENST00000440480 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
CDKN1C-204ENST00000440480 R4GN34 69 aa9.98□□□□□ -0.81
CDKN1C-204ENST00000440480 PRAC1Q96KF2 57 aa9.97□□□□□ -0.81
CDKN1C-204ENST00000440480 ROMO1P60602 79 aa9.89□□□□□ -0.83
CDKN1C-204ENST00000440480 SPINT4Q6UDR6 99 aa9.89□□□□□ -0.83
CDKN1C-204ENST00000440480 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
CDKN1C-204ENST00000440480 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
CDKN1C-204ENST00000440480 KRTAP12-2P59991 146 aa9.86□□□□□ -0.83
CDKN1C-204ENST00000440480 KRTAP9-8Q9BYQ0 159 aa9.86□□□□□ -0.83
CDKN1C-204ENST00000440480 MT2AP02795 61 aa9.8□□□□□ -0.84
CDKN1C-204ENST00000440480 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
CDKN1C-204ENST00000440480 KRTAP10-10P60014 251 aa9.77□□□□□ -0.84
CDKN1C-204ENST00000440480 MT1FP04733 61 aa9.74□□□□□ -0.85
CDKN1C-204ENST00000440480 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
CDKN1C-204ENST00000440480 KRTAP25-1Q3LHN0 102 aa9.7□□□□□ -0.86
CDKN1C-204ENST00000440480 LCE2BO14633 110 aa9.68□□□□□ -0.86
CDKN1C-204ENST00000440480 SPRR2GQ9BYE4 73 aa9.52□□□□□ -0.89
CDKN1C-204ENST00000440480 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
CDKN1C-204ENST00000440480 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
CDKN1C-204ENST00000440480 CAMK2N1Q7Z7J9 78 aa9.41□□□□□ -0.9
CDKN1C-204ENST00000440480 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
CDKN1C-204ENST00000440480 C10orf95Q9H7T3 257 aa9.31□□□□□ -0.92
CDKN1C-204ENST00000440480 KRTAP19-8Q3LI54 63 aa9.28□□□□□ -0.92
CDKN1C-204ENST00000440480 FSIP2Q5CZC0 6907 aa9.25□□□□□ -0.93
CDKN1C-204ENST00000440480 USH2AO75445 5202 aa9.22□□□□□ -0.93
CDKN1C-204ENST00000440480 PLAC4Q8WY50 150 aa9.22□□□□□ -0.93
CDKN1C-204ENST00000440480 MT1BP07438 61 aa9.17□□□□□ -0.94
CDKN1C-204ENST00000440480 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
CDKN1C-204ENST00000440480 TNP1P09430 55 aa9.04□□□□□ -0.96
CDKN1C-204ENST00000440480 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
CDKN1C-204ENST00000440480 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
CDKN1C-204ENST00000440480 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
CDKN1C-204ENST00000440480 MT1XP80297 61 aa8.84□□□□□ -0.99
CDKN1C-204ENST00000440480 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
CDKN1C-204ENST00000440480 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
CDKN1C-204ENST00000440480 KRTAP10-5P60370 271 aa8.82□□□□□ -1
CDKN1C-204ENST00000440480 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
CDKN1C-204ENST00000440480 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
CDKN1C-204ENST00000440480 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
CDKN1C-204ENST00000440480 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
CDKN1C-204ENST00000440480 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
CDKN1C-204ENST00000440480 KRTAP10-12P60413 245 aa8.4□□□□□ -1.07
CDKN1C-204ENST00000440480 KRTAP8-1Q8IUC2 63 aa8.36□□□□□ -1.07
CDKN1C-204ENST00000440480 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
CDKN1C-204ENST00000440480 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
CDKN1C-204ENST00000440480 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
CDKN1C-204ENST00000440480 KMT2DO14686 5537 aa8.22□□□□□ -1.09
CDKN1C-204ENST00000440480 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
CDKN1C-204ENST00000440480 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
CDKN1C-204ENST00000440480 SYNE2Q8WXH0 6885 aaKnown RBP8.21□□□□□ -1.1
CDKN1C-204ENST00000440480 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
CDKN1C-204ENST00000440480 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
CDKN1C-204ENST00000440480 SPRR5A0A1B0GTR4 108 aa8.1□□□□□ -1.11
CDKN1C-204ENST00000440480 KRTAP9-7A8MTY7 169 aa8.01□□□□□ -1.13
CDKN1C-204ENST00000440480 H3BS24 57 aa7.95□□□□□ -1.14
CDKN1C-204ENST00000440480 KRTAP19-5Q3LI72 72 aa7.95□□□□□ -1.14
CDKN1C-204ENST00000440480 KRTAP19-7Q3SYF9 63 aa7.88□□□□□ -1.15
CDKN1C-204ENST00000440480 KRTAP6-3Q3LI67 103 aa7.87□□□□□ -1.15
CDKN1C-204ENST00000440480 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms