RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 A0A087WVE0 104 aa7.19□□□□□ -1.26
SNRPD3-204ENST00000439775 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
SNRPD3-204ENST00000439775 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
SNRPD3-204ENST00000439775 UQCRQO14949 82 aa7.17□□□□□ -1.26
SNRPD3-204ENST00000439775 ATOX1O00244 68 aa7.16□□□□□ -1.26
SNRPD3-204ENST00000439775 HIST1H4AP62805 103 aaKnown RBP7.14□□□□□ -1.27
SNRPD3-204ENST00000439775 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
SNRPD3-204ENST00000439775 H0Y9P7 68 aa7.13□□□□□ -1.27
SNRPD3-204ENST00000439775 H0YAA0 97 aa7.11□□□□□ -1.27
SNRPD3-204ENST00000439775 NDUFC1O43677 76 aa7.11□□□□□ -1.27
SNRPD3-204ENST00000439775 A8MUN3 132 aa7.08□□□□□ -1.28
SNRPD3-204ENST00000439775 LINC00643Q86TS7 51 aa7.04□□□□□ -1.28
SNRPD3-204ENST00000439775 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
SNRPD3-204ENST00000439775 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
SNRPD3-204ENST00000439775 NEBP20929 6669 aa7.02□□□□□ -1.29
SNRPD3-204ENST00000439775 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
SNRPD3-204ENST00000439775 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
SNRPD3-204ENST00000439775 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
SNRPD3-204ENST00000439775 MP68P56378 58 aa6.95□□□□□ -1.3
SNRPD3-204ENST00000439775 KMT2DO14686 5537 aa6.9□□□□□ -1.3
SNRPD3-204ENST00000439775 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
SNRPD3-204ENST00000439775 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
SNRPD3-204ENST00000439775 H3BPC8 53 aa6.86□□□□□ -1.31
SNRPD3-204ENST00000439775 MT1XP80297 61 aa6.85□□□□□ -1.31
SNRPD3-204ENST00000439775 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
SNRPD3-204ENST00000439775 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
SNRPD3-204ENST00000439775 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
SNRPD3-204ENST00000439775 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
SNRPD3-204ENST00000439775 R4GN34 69 aa6.83□□□□□ -1.32
SNRPD3-204ENST00000439775 A0A1B0GV90 55 aa6.81□□□□□ -1.32
SNRPD3-204ENST00000439775 P0C880 135 aa6.81□□□□□ -1.32
SNRPD3-204ENST00000439775 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
SNRPD3-204ENST00000439775 J3QR89 54 aa6.76□□□□□ -1.33
SNRPD3-204ENST00000439775 M0QZ58 72 aa6.76□□□□□ -1.33
SNRPD3-204ENST00000439775 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
SNRPD3-204ENST00000439775 SCGB1A1P11684 91 aa6.74□□□□□ -1.33
SNRPD3-204ENST00000439775 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
SNRPD3-204ENST00000439775 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
SNRPD3-204ENST00000439775 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
SNRPD3-204ENST00000439775 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
SNRPD3-204ENST00000439775 SPRR2EP22531 72 aa6.67□□□□□ -1.34
SNRPD3-204ENST00000439775 SPRR2BP35325 72 aa6.67□□□□□ -1.34
SNRPD3-204ENST00000439775 SPRR2AP35326 72 aa6.67□□□□□ -1.34
SNRPD3-204ENST00000439775 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
SNRPD3-204ENST00000439775 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
SNRPD3-204ENST00000439775 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
SNRPD3-204ENST00000439775 ACYP2P14621 99 aa6.62□□□□□ -1.35
SNRPD3-204ENST00000439775 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
SNRPD3-204ENST00000439775 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
SNRPD3-204ENST00000439775 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
SNRPD3-204ENST00000439775 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
SNRPD3-204ENST00000439775 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
SNRPD3-204ENST00000439775 PCP4P48539 62 aa6.53□□□□□ -1.36
SNRPD3-204ENST00000439775 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
SNRPD3-204ENST00000439775 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
SNRPD3-204ENST00000439775 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
SNRPD3-204ENST00000439775 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
SNRPD3-204ENST00000439775 K7ERU9 68 aa6.45□□□□□ -1.38
SNRPD3-204ENST00000439775 SPRR2DP22532 72 aa6.45□□□□□ -1.38
SNRPD3-204ENST00000439775 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
SNRPD3-204ENST00000439775 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
SNRPD3-204ENST00000439775 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
SNRPD3-204ENST00000439775 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
SNRPD3-204ENST00000439775 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
SNRPD3-204ENST00000439775 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
SNRPD3-204ENST00000439775 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
SNRPD3-204ENST00000439775 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
SNRPD3-204ENST00000439775 COA5Q86WW8 74 aa6.19□□□□□ -1.42
SNRPD3-204ENST00000439775 SEC61GP60059 68 aa6.13□□□□□ -1.43
SNRPD3-204ENST00000439775 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
SNRPD3-204ENST00000439775 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
SNRPD3-204ENST00000439775 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
SNRPD3-204ENST00000439775 A0A0D9SG42 100 aa6.09□□□□□ -1.43
SNRPD3-204ENST00000439775 MT1EP04732 61 aa6.08□□□□□ -1.44
SNRPD3-204ENST00000439775 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
SNRPD3-204ENST00000439775 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
SNRPD3-204ENST00000439775 A0A1B0GU33 70 aa6.04□□□□□ -1.44
SNRPD3-204ENST00000439775 COX7CP15954 63 aa6.04□□□□□ -1.44
SNRPD3-204ENST00000439775 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
SNRPD3-204ENST00000439775 H7BZZ5 65 aa6□□□□□ -1.45
SNRPD3-204ENST00000439775 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
SNRPD3-204ENST00000439775 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
SNRPD3-204ENST00000439775 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.46
SNRPD3-204ENST00000439775 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
SNRPD3-204ENST00000439775 MT1GP13640 62 aa5.9□□□□□ -1.46
SNRPD3-204ENST00000439775 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
SNRPD3-204ENST00000439775 A0A1B0GU69 56 aa5.88□□□□□ -1.47
SNRPD3-204ENST00000439775 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
SNRPD3-204ENST00000439775 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
SNRPD3-204ENST00000439775 A8MU10 97 aa5.81□□□□□ -1.48
SNRPD3-204ENST00000439775 MT1MQ8N339 61 aa5.79□□□□□ -1.48
SNRPD3-204ENST00000439775 MT1LQ93083 61 aa5.79□□□□□ -1.48
SNRPD3-204ENST00000439775 TNP1P09430 55 aa5.75□□□□□ -1.49
SNRPD3-204ENST00000439775 ANAPC13Q9BS18 74 aa5.75□□□□□ -1.49
SNRPD3-204ENST00000439775 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
SNRPD3-204ENST00000439775 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
SNRPD3-204ENST00000439775 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
SNRPD3-204ENST00000439775 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
SNRPD3-204ENST00000439775 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
SNRPD3-204ENST00000439775 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms